; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g12150 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g12150
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationchr4:9186618..9192626
RNA-Seq ExpressionMoc04g12150
SyntenyMoc04g12150
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148915.1 uncharacterized protein LOC111017466 [Momordica charantia]2.7e-6264.29Show/hide
Query:  EVDGLLFVSNRPVSITKSVREVFPQVAHRICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQSPCPCTSIASIALLEHARV---
        EVDGLL+VS+R V ITKS R+VFPQ AH I MQHLSTNLK+KFK+DV+QEMFILAAK  RK EF YYFSQ AGFPEVQ       +  I   +  R    
Subjt:  EVDGLLFVSNRPVSITKSVREVFPQVAHRICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQSPCPCTSIASIALLEHARV---

Query:  -LLQCWF-----------YEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCKEFDYFQLPCSHAIAAATHR
         L  C F              RTYASSR+TILT++GE KMR+ +NL  THS  PIDHHELE+ +GLK VRVNLNA   GCKEFDYFQLPCSHAIAA T+R
Subjt:  -LLQCWF-----------YEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCKEFDYFQLPCSHAIAAATHR

Query:  NVNRYTLCSP
        NVNRYTLCSP
Subjt:  NVNRYTLCSP

XP_022153251.1 uncharacterized protein LOC111020787 [Momordica charantia]7.7e-6264.68Show/hide
Query:  ICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQSPCP----------------------------------CTSIASIALLEHA
        ICMQHLSTNLK++FK+D +QEMFILAAK  +KSEFRYYFSQ AGF EVQ                                        S+   ALLEHA
Subjt:  ICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQSPCP----------------------------------CTSIASIALLEHA

Query:  RVLLQCWFYEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCKEFDYFQLPCSHAIAAATHRNVNRYTLCSP
        R LLQ WFYE RTY SSR+TILT++GE KMR+A+NL  THSITPIDHHELEV DGLK VRVNLNARTCGCKEFDYFQLPCSHAIA AT+R VNRYTLCSP
Subjt:  RVLLQCWFYEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCKEFDYFQLPCSHAIAAATHRNVNRYTLCSP

Query:  A
        A
Subjt:  A

XP_022154930.1 uncharacterized protein LOC111022077 [Momordica charantia]5.5e-6863.04Show/hide
Query:  EVDGLLFVSNRPVSITKSVREVFPQVAHRICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQ----------------------
        EVDGLLFVS+R VSITKSVREVFP+ AH ICM HLS NLK+KFKND IQ MFILAAK F+KS FRYYFSQ AGFP+VQ                      
Subjt:  EVDGLLFVSNRPVSITKSVREVFPQVAHRICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQ----------------------

Query:  --SPCPCTSIASI----------ALLEHARVLLQCWFYEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCK
          +     SI ++          ALLE A  L+Q WFYE RTYASSR+TILT++GE KMR+A+NL   +SITPID HELEV DGLK  RVNLNARTCGCK
Subjt:  --SPCPCTSIASI----------ALLEHARVLLQCWFYEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCK

Query:  EFDYFQLPCSHAIAAATHRNVNRYTLCSPA
        EFD+++LPCSHAIAA T +NVNRY+LCSPA
Subjt:  EFDYFQLPCSHAIAAATHRNVNRYTLCSPA

XP_022155392.1 uncharacterized protein LOC111022536 [Momordica charantia]6.1e-6765.24Show/hide
Query:  EVFPQVAHRICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQSPCP----------------------------------CTSI
        +VFPQ AH ICMQHL TNLK+KFK+D +QEMFILAAK  RKSEFRYYFSQ AGFP+VQ                                        S+
Subjt:  EVFPQVAHRICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQSPCP----------------------------------CTSI

Query:  ASIALLEHARVLLQCWFYEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCKEFDYFQLPCSHAIAAATHRN
            LLEHA VLLQ WFYE RTYAS+R+TILT++GE KMR+A+NL  THSITPIDHHELEV +GLK VRVNLNARTCGCKEFDYFQLPCSHAIAAAT+RN
Subjt:  ASIALLEHARVLLQCWFYEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCKEFDYFQLPCSHAIAAATHRN

Query:  VNRYTLCSPA
        VNRYTLCSPA
Subjt:  VNRYTLCSPA

XP_022158892.1 uncharacterized protein LOC111025350 [Momordica charantia]1.0e-10192.27Show/hide
Query:  EDVIEDHSENEEVDGLLFVSNRPVSITKSVREVFPQVAHRICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQSPCPCTSIASI
        +DVI   S  +EVDGLLFVSNRPVSITKSVREVFPQVAHRICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQ         SI
Subjt:  EDVIEDHSENEEVDGLLFVSNRPVSITKSVREVFPQVAHRICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQSPCPCTSIASI

Query:  ALLEHARVLLQCWFYEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCKEFDYFQLPCSHAIAAATHRNVNR
        ALLEHARVLLQCWFYEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCKEFDYFQLPCSHAIAAATHRNVNR
Subjt:  ALLEHARVLLQCWFYEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCKEFDYFQLPCSHAIAAATHRNVNR

Query:  YTLCSPA
        YTLCSPA
Subjt:  YTLCSPA

TrEMBL top hitse value%identityAlignment
A0A6J1D499 uncharacterized protein LOC1110174661.3e-6264.29Show/hide
Query:  EVDGLLFVSNRPVSITKSVREVFPQVAHRICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQSPCPCTSIASIALLEHARV---
        EVDGLL+VS+R V ITKS R+VFPQ AH I MQHLSTNLK+KFK+DV+QEMFILAAK  RK EF YYFSQ AGFPEVQ       +  I   +  R    
Subjt:  EVDGLLFVSNRPVSITKSVREVFPQVAHRICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQSPCPCTSIASIALLEHARV---

Query:  -LLQCWF-----------YEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCKEFDYFQLPCSHAIAAATHR
         L  C F              RTYASSR+TILT++GE KMR+ +NL  THS  PIDHHELE+ +GLK VRVNLNA   GCKEFDYFQLPCSHAIAA T+R
Subjt:  -LLQCWF-----------YEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCKEFDYFQLPCSHAIAAATHR

Query:  NVNRYTLCSP
        NVNRYTLCSP
Subjt:  NVNRYTLCSP

A0A6J1DK28 uncharacterized protein LOC1110207873.7e-6264.68Show/hide
Query:  ICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQSPCP----------------------------------CTSIASIALLEHA
        ICMQHLSTNLK++FK+D +QEMFILAAK  +KSEFRYYFSQ AGF EVQ                                        S+   ALLEHA
Subjt:  ICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQSPCP----------------------------------CTSIASIALLEHA

Query:  RVLLQCWFYEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCKEFDYFQLPCSHAIAAATHRNVNRYTLCSP
        R LLQ WFYE RTY SSR+TILT++GE KMR+A+NL  THSITPIDHHELEV DGLK VRVNLNARTCGCKEFDYFQLPCSHAIA AT+R VNRYTLCSP
Subjt:  RVLLQCWFYEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCKEFDYFQLPCSHAIAAATHRNVNRYTLCSP

Query:  A
        A
Subjt:  A

A0A6J1DL12 uncharacterized protein LOC1110220772.7e-6863.04Show/hide
Query:  EVDGLLFVSNRPVSITKSVREVFPQVAHRICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQ----------------------
        EVDGLLFVS+R VSITKSVREVFP+ AH ICM HLS NLK+KFKND IQ MFILAAK F+KS FRYYFSQ AGFP+VQ                      
Subjt:  EVDGLLFVSNRPVSITKSVREVFPQVAHRICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQ----------------------

Query:  --SPCPCTSIASI----------ALLEHARVLLQCWFYEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCK
          +     SI ++          ALLE A  L+Q WFYE RTYASSR+TILT++GE KMR+A+NL   +SITPID HELEV DGLK  RVNLNARTCGCK
Subjt:  --SPCPCTSIASI----------ALLEHARVLLQCWFYEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCK

Query:  EFDYFQLPCSHAIAAATHRNVNRYTLCSPA
        EFD+++LPCSHAIAA T +NVNRY+LCSPA
Subjt:  EFDYFQLPCSHAIAAATHRNVNRYTLCSPA

A0A6J1DP73 uncharacterized protein LOC1110225363.0e-6765.24Show/hide
Query:  EVFPQVAHRICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQSPCP----------------------------------CTSI
        +VFPQ AH ICMQHL TNLK+KFK+D +QEMFILAAK  RKSEFRYYFSQ AGFP+VQ                                        S+
Subjt:  EVFPQVAHRICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQSPCP----------------------------------CTSI

Query:  ASIALLEHARVLLQCWFYEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCKEFDYFQLPCSHAIAAATHRN
            LLEHA VLLQ WFYE RTYAS+R+TILT++GE KMR+A+NL  THSITPIDHHELEV +GLK VRVNLNARTCGCKEFDYFQLPCSHAIAAAT+RN
Subjt:  ASIALLEHARVLLQCWFYEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCKEFDYFQLPCSHAIAAATHRN

Query:  VNRYTLCSPA
        VNRYTLCSPA
Subjt:  VNRYTLCSPA

A0A6J1DYC8 uncharacterized protein LOC1110253504.8e-10292.27Show/hide
Query:  EDVIEDHSENEEVDGLLFVSNRPVSITKSVREVFPQVAHRICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQSPCPCTSIASI
        +DVI   S  +EVDGLLFVSNRPVSITKSVREVFPQVAHRICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQ         SI
Subjt:  EDVIEDHSENEEVDGLLFVSNRPVSITKSVREVFPQVAHRICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQSPCPCTSIASI

Query:  ALLEHARVLLQCWFYEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCKEFDYFQLPCSHAIAAATHRNVNR
        ALLEHARVLLQCWFYEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCKEFDYFQLPCSHAIAAATHRNVNR
Subjt:  ALLEHARVLLQCWFYEMRTYASSRKTILTNHGETKMRSAKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCKEFDYFQLPCSHAIAAATHRNVNR

Query:  YTLCSPA
        YTLCSPA
Subjt:  YTLCSPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAATCGCATCGTGTATGTAAAGATGAATATGTCCCTCACTTATACGAAAGAAGTTCAAATTACGAAGGCTGAATCAATGAAAAACCAGGTGGAAGGTGGAATGAG
AATTGATCCTGAACAATTTGACCTTGTTATACAGTGTGTGTATAGATTTGAATTGCAATACGAAGTCCCCAACTACCTGATATTTGATGATACCAATTTGAGATTTTATT
TAAATGGCCCTCCATATCCATCTCAAGTGCTCTTGTACATAATTGGCCTACCGAAAGCAACATATGGTCACAGAAATATTTTTTCAGAAACCCAGACATCATCTTCATTC
CCATACTACTCAGGGCAGAATGATCCATGTTTTGGCCCTTCAATTTCTATTCACTGTCCTTTGCAGGATGTTTGTGATGACGAATCTACATATTATGGTCAATTGTACGA
TAATGAGGTTAAGTATGAGCTTCAGAGTGATGATGAGTATGATTATGATGAATATCATACTGAGGATAAGGTTGCGGACGAGGATGTTGGAGCAGAGTTTGAGAACGATG
GTGGGAATGGGTATTACAATGAGAACGAGGATGTGATTGAAGATCATTCTGAGAACGAAGAGGTTGATGGGTTATTATTCGTATCTAACCGACCAGTTTCCATTACGAAA
TCTGTTAGGGAGGTTTTTCCTCAAGTAGCTCACAGAATCTGCATGCAGCACTTATCCACGAACTTAAAGAACAAGTTCAAGAATGATGTCATTCAAGAAATGTTCATATT
AGCAGCAAAGACATTCCGAAAGTCAGAGTTTAGGTACTATTTTTCCCAATTTGCAGGATTTCCAGAGGTCCAAAGTCCTTGTCCATGCACGTCCATTGCTAGCATTGCAC
TTCTTGAACATGCTCGAGTGCTCTTACAGTGCTGGTTTTACGAGATGCGAACCTACGCATCTAGTCGCAAAACTATTCTTACTAATCATGGTGAGACTAAGATGCGTAGT
GCGAAGAACCTTTTTCATACACACTCCATCACACCCATTGACCACCATGAGTTGGAGGTGTGCGATGGACTAAAAATGGTGCGCGTGAATTTAAATGCAAGGACATGCGG
GTGTAAAGAGTTTGACTATTTCCAGCTACCATGCTCTCATGCTATTGCAGCGGCAACCCATCGGAACGTGAACAGGTATACCCTATGCTCACCTGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAAATCGCATCGTGTATGTAAAGATGAATATGTCCCTCACTTATACGAAAGAAGTTCAAATTACGAAGGCTGAATCAATGAAAAACCAGGTGGAAGGTGGAATGAG
AATTGATCCTGAACAATTTGACCTTGTTATACAGTGTGTGTATAGATTTGAATTGCAATACGAAGTCCCCAACTACCTGATATTTGATGATACCAATTTGAGATTTTATT
TAAATGGCCCTCCATATCCATCTCAAGTGCTCTTGTACATAATTGGCCTACCGAAAGCAACATATGGTCACAGAAATATTTTTTCAGAAACCCAGACATCATCTTCATTC
CCATACTACTCAGGGCAGAATGATCCATGTTTTGGCCCTTCAATTTCTATTCACTGTCCTTTGCAGGATGTTTGTGATGACGAATCTACATATTATGGTCAATTGTACGA
TAATGAGGTTAAGTATGAGCTTCAGAGTGATGATGAGTATGATTATGATGAATATCATACTGAGGATAAGGTTGCGGACGAGGATGTTGGAGCAGAGTTTGAGAACGATG
GTGGGAATGGGTATTACAATGAGAACGAGGATGTGATTGAAGATCATTCTGAGAACGAAGAGGTTGATGGGTTATTATTCGTATCTAACCGACCAGTTTCCATTACGAAA
TCTGTTAGGGAGGTTTTTCCTCAAGTAGCTCACAGAATCTGCATGCAGCACTTATCCACGAACTTAAAGAACAAGTTCAAGAATGATGTCATTCAAGAAATGTTCATATT
AGCAGCAAAGACATTCCGAAAGTCAGAGTTTAGGTACTATTTTTCCCAATTTGCAGGATTTCCAGAGGTCCAAAGTCCTTGTCCATGCACGTCCATTGCTAGCATTGCAC
TTCTTGAACATGCTCGAGTGCTCTTACAGTGCTGGTTTTACGAGATGCGAACCTACGCATCTAGTCGCAAAACTATTCTTACTAATCATGGTGAGACTAAGATGCGTAGT
GCGAAGAACCTTTTTCATACACACTCCATCACACCCATTGACCACCATGAGTTGGAGGTGTGCGATGGACTAAAAATGGTGCGCGTGAATTTAAATGCAAGGACATGCGG
GTGTAAAGAGTTTGACTATTTCCAGCTACCATGCTCTCATGCTATTGCAGCGGCAACCCATCGGAACGTGAACAGGTATACCCTATGCTCACCTGCATAG
Protein sequenceShow/hide protein sequence
MLNRIVYVKMNMSLTYTKEVQITKAESMKNQVEGGMRIDPEQFDLVIQCVYRFELQYEVPNYLIFDDTNLRFYLNGPPYPSQVLLYIIGLPKATYGHRNIFSETQTSSSF
PYYSGQNDPCFGPSISIHCPLQDVCDDESTYYGQLYDNEVKYELQSDDEYDYDEYHTEDKVADEDVGAEFENDGGNGYYNENEDVIEDHSENEEVDGLLFVSNRPVSITK
SVREVFPQVAHRICMQHLSTNLKNKFKNDVIQEMFILAAKTFRKSEFRYYFSQFAGFPEVQSPCPCTSIASIALLEHARVLLQCWFYEMRTYASSRKTILTNHGETKMRS
AKNLFHTHSITPIDHHELEVCDGLKMVRVNLNARTCGCKEFDYFQLPCSHAIAAATHRNVNRYTLCSPA