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Moc04g12280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g12280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:9302618..9304572
RNA-Seq ExpressionMoc04g12280
SyntenyMoc04g12280
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
VFQ60264.1 unnamed protein product [Cuscuta campestris]1.0e-1044.87Show/hide
Query:  KFTGENFSFWKMQVKDLLTCKKIHKTLGERPVGMTDRNWSEMDEQAVANIRMSLSMNVCSLVMKETTTKELLKALQDM
        KF G +FS+WKMQ++DLL  K +   LG++P  M+D +W+ +D +A++ IR+SL+ NV   ++KE T KE+++AL +M
Subjt:  KFTGENFSFWKMQVKDLLTCKKIHKTLGERPVGMTDRNWSEMDEQAVANIRMSLSMNVCSLVMKETTTKELLKALQDM

VFQ90050.1 unnamed protein product, partial [Cuscuta campestris]3.5e-1142.35Show/hide
Query:  KFTGENFSFWKMQVKDLLTCKKIHKTLGERPVGMTDRNWSEMDEQAVANIRMSLSMNVCSLVMKETTTKELLKALQDMVVAIGHK
        KF G +FS+WKMQ++DLL  K +   LG++P  M+D NW+ +D +A++ IR+SL+ NV   ++KE T K ++ AL ++++++G K
Subjt:  KFTGENFSFWKMQVKDLLTCKKIHKTLGERPVGMTDRNWSEMDEQAVANIRMSLSMNVCSLVMKETTTKELLKALQDMVVAIGHK

XP_022152155.1 cinnamoyl-CoA reductase-like SNL6 [Momordica charantia]1.1e-3672.22Show/hide
Query:  MVVAIGHKRSSVYVSEFRVAKGSLRQIMHRVAADDSGRDLKEPAALMAKIDEKNLPSAQVKQLRSTEKGSRNLIGHRVHTSTVRRSGELVKSHRRISALK
        MVVA GHKRS VYVSEF VAKGSLRQ MH+V A  S R L+ PAALMAK D+KNLPS QVKQLRST+KG+ NLIGHRVHTS VR  GELVKSHRRISALK
Subjt:  MVVAIGHKRSSVYVSEFRVAKGSLRQIMHRVAADDSGRDLKEPAALMAKIDEKNLPSAQVKQLRSTEKGSRNLIGHRVHTSTVRRSGELVKSHRRISALK

Query:  GTSSVSTVVTELGGSARGIFIQSLRT
        GT S+S+V T L GSA+     S R+
Subjt:  GTSSVSTVVTELGGSARGIFIQSLRT

XP_022157059.1 uncharacterized protein LOC111023870 [Momordica charantia]1.8e-3169.23Show/hide
Query:  SVYVSEFRVAKGSLRQIMHRVAADDSGRDLKEPAALMAKIDEKNLPSAQVKQLRSTEKGSRNLIGHRVHTSTVRRSGELVKSHRRISALKGTSSVSTVVT
        SV   E     GSLRQ MHRVA D SGRDLK P  LMA+ D+KNLPSA VKQLRSTEKG+ NLIGH+VHTS VRRSGELVKSHRRISA KGT  VS+VVT
Subjt:  SVYVSEFRVAKGSLRQIMHRVAADDSGRDLKEPAALMAKIDEKNLPSAQVKQLRSTEKGSRNLIGHRVHTSTVRRSGELVKSHRRISALKGTSSVSTVVT

Query:  ELGGSARGIFIQSLRTR
        +LGGSA+     S + R
Subjt:  ELGGSARGIFIQSLRTR

XP_024021224.1 uncharacterized protein LOC112091537 [Morus notabilis]1.0e-1045.68Show/hide
Query:  GALKFTGENFSFWKMQVKDLLTCKKIHKTLGERPVGMTDRNWSEMDEQAVANIRMSLSMNVCSLVMKETTTKELLKALQDM
        G  KF G +F++WKMQ++D L  KK+H  LGE+P GM D  W  +D Q +  IR++L+ NV   V KE T   L+  L DM
Subjt:  GALKFTGENFSFWKMQVKDLLTCKKIHKTLGERPVGMTDRNWSEMDEQAVANIRMSLSMNVCSLVMKETTTKELLKALQDM

TrEMBL top hitse value%identityAlignment
A0A484K8X3 Uncharacterized protein5.0e-1144.87Show/hide
Query:  KFTGENFSFWKMQVKDLLTCKKIHKTLGERPVGMTDRNWSEMDEQAVANIRMSLSMNVCSLVMKETTTKELLKALQDM
        KF G +FS+WKMQ++DLL  K +   LG++P  M+D +W+ +D +A++ IR+SL+ NV   ++KE T KE+++AL +M
Subjt:  KFTGENFSFWKMQVKDLLTCKKIHKTLGERPVGMTDRNWSEMDEQAVANIRMSLSMNVCSLVMKETTTKELLKALQDM

A0A484MMH6 Uncharacterized protein (Fragment)1.7e-1142.35Show/hide
Query:  KFTGENFSFWKMQVKDLLTCKKIHKTLGERPVGMTDRNWSEMDEQAVANIRMSLSMNVCSLVMKETTTKELLKALQDMVVAIGHK
        KF G +FS+WKMQ++DLL  K +   LG++P  M+D NW+ +D +A++ IR+SL+ NV   ++KE T K ++ AL ++++++G K
Subjt:  KFTGENFSFWKMQVKDLLTCKKIHKTLGERPVGMTDRNWSEMDEQAVANIRMSLSMNVCSLVMKETTTKELLKALQDMVVAIGHK

A0A484MTE7 CCHC-type domain-containing protein6.5e-1144.87Show/hide
Query:  KFTGENFSFWKMQVKDLLTCKKIHKTLGERPVGMTDRNWSEMDEQAVANIRMSLSMNVCSLVMKETTTKELLKALQDM
        KF G +FS+WKMQ++DLL  K +   LG++P  M+DR+W+ +D +A++ IR+SL+ NV   ++KE T K +++AL +M
Subjt:  KFTGENFSFWKMQVKDLLTCKKIHKTLGERPVGMTDRNWSEMDEQAVANIRMSLSMNVCSLVMKETTTKELLKALQDM

A0A6J1DD48 cinnamoyl-CoA reductase-like SNL65.3e-3772.22Show/hide
Query:  MVVAIGHKRSSVYVSEFRVAKGSLRQIMHRVAADDSGRDLKEPAALMAKIDEKNLPSAQVKQLRSTEKGSRNLIGHRVHTSTVRRSGELVKSHRRISALK
        MVVA GHKRS VYVSEF VAKGSLRQ MH+V A  S R L+ PAALMAK D+KNLPS QVKQLRST+KG+ NLIGHRVHTS VR  GELVKSHRRISALK
Subjt:  MVVAIGHKRSSVYVSEFRVAKGSLRQIMHRVAADDSGRDLKEPAALMAKIDEKNLPSAQVKQLRSTEKGSRNLIGHRVHTSTVRRSGELVKSHRRISALK

Query:  GTSSVSTVVTELGGSARGIFIQSLRT
        GT S+S+V T L GSA+     S R+
Subjt:  GTSSVSTVVTELGGSARGIFIQSLRT

A0A6J1DVE9 uncharacterized protein LOC1110238708.8e-3269.23Show/hide
Query:  SVYVSEFRVAKGSLRQIMHRVAADDSGRDLKEPAALMAKIDEKNLPSAQVKQLRSTEKGSRNLIGHRVHTSTVRRSGELVKSHRRISALKGTSSVSTVVT
        SV   E     GSLRQ MHRVA D SGRDLK P  LMA+ D+KNLPSA VKQLRSTEKG+ NLIGH+VHTS VRRSGELVKSHRRISA KGT  VS+VVT
Subjt:  SVYVSEFRVAKGSLRQIMHRVAADDSGRDLKEPAALMAKIDEKNLPSAQVKQLRSTEKGSRNLIGHRVHTSTVRRSGELVKSHRRISALKGTSSVSTVVT

Query:  ELGGSARGIFIQSLRTR
        +LGGSA+     S + R
Subjt:  ELGGSARGIFIQSLRTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGACAAATATCACGCACACCATTACTATGAAGGGGCTCTGAAGTTCACCGGGGAGAATTTCAGTTTTTGGAAGATGCAGGTAAAAGATCTTCTTACATGCAAGAA
GATACACAAGACTTTAGGGGAGCGACCAGTAGGGATGACAGACAGGAATTGGAGTGAGATGGATGAGCAGGCCGTTGCGAATATCAGGATGTCGTTGTCAATGAATGTTT
GTAGTCTAGTAATGAAAGAGACTACAACAAAAGAATTATTGAAGGCTTTGCAAGACATGGTGGTGGCAATAGGCCACAAGAGATCTTCTGTTTATGTGTCAGAGTTTAGG
GTTGCCAAGGGTTCACTGAGACAGATAATGCACAGAGTAGCTGCAGATGATTCAGGGCGAGACCTTAAAGAACCAGCAGCATTGATGGCCAAAATAGATGAGAAGAATCT
GCCATCAGCTCAAGTTAAACAGTTGAGAAGTACAGAAAAGGGAAGCAGGAATTTGATAGGTCATCGAGTTCATACCTCAACTGTCAGACGTTCAGGTGAGCTGGTGAAGT
CGCATAGGCGAATTAGTGCATTGAAGGGTACGAGTTCTGTTTCTACTGTGGTGACAGAATTGGGTGGGAGCGCCAGGGGAATCTTCATTCAAAGTCTGAGGACAAGACCT
CGTAGAGCGCCCAGTCTCGGGCCAGTGTCAGACGATGCTTGGTGTGAGGTAGAAAATTGTCGCTTTGTCTCCAAGTGGGAGATTGTTGGGATTGGTGGAGTCAAAACGAT
GTCGGATCGAGTTAGGGAAGAGTCGGGATTGAGCCAGGACGTGTCGGGGTCGAAGCAGGATGAAAACAGGGGAAAACTGAAGCTGCATGCTAAGAAGGCTGAAGGGGCAG
CACTGCGGTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGACAAATATCACGCACACCATTACTATGAAGGGGCTCTGAAGTTCACCGGGGAGAATTTCAGTTTTTGGAAGATGCAGGTAAAAGATCTTCTTACATGCAAGAA
GATACACAAGACTTTAGGGGAGCGACCAGTAGGGATGACAGACAGGAATTGGAGTGAGATGGATGAGCAGGCCGTTGCGAATATCAGGATGTCGTTGTCAATGAATGTTT
GTAGTCTAGTAATGAAAGAGACTACAACAAAAGAATTATTGAAGGCTTTGCAAGACATGGTGGTGGCAATAGGCCACAAGAGATCTTCTGTTTATGTGTCAGAGTTTAGG
GTTGCCAAGGGTTCACTGAGACAGATAATGCACAGAGTAGCTGCAGATGATTCAGGGCGAGACCTTAAAGAACCAGCAGCATTGATGGCCAAAATAGATGAGAAGAATCT
GCCATCAGCTCAAGTTAAACAGTTGAGAAGTACAGAAAAGGGAAGCAGGAATTTGATAGGTCATCGAGTTCATACCTCAACTGTCAGACGTTCAGGTGAGCTGGTGAAGT
CGCATAGGCGAATTAGTGCATTGAAGGGTACGAGTTCTGTTTCTACTGTGGTGACAGAATTGGGTGGGAGCGCCAGGGGAATCTTCATTCAAAGTCTGAGGACAAGACCT
CGTAGAGCGCCCAGTCTCGGGCCAGTGTCAGACGATGCTTGGTGTGAGGTAGAAAATTGTCGCTTTGTCTCCAAGTGGGAGATTGTTGGGATTGGTGGAGTCAAAACGAT
GTCGGATCGAGTTAGGGAAGAGTCGGGATTGAGCCAGGACGTGTCGGGGTCGAAGCAGGATGAAAACAGGGGAAAACTGAAGCTGCATGCTAAGAAGGCTGAAGGGGCAG
CACTGCGGTGCTAG
Protein sequenceShow/hide protein sequence
MGDKYHAHHYYEGALKFTGENFSFWKMQVKDLLTCKKIHKTLGERPVGMTDRNWSEMDEQAVANIRMSLSMNVCSLVMKETTTKELLKALQDMVVAIGHKRSSVYVSEFR
VAKGSLRQIMHRVAADDSGRDLKEPAALMAKIDEKNLPSAQVKQLRSTEKGSRNLIGHRVHTSTVRRSGELVKSHRRISALKGTSSVSTVVTELGGSARGIFIQSLRTRP
RRAPSLGPVSDDAWCEVENCRFVSKWEIVGIGGVKTMSDRVREESGLSQDVSGSKQDENRGKLKLHAKKAEGAALRC