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Moc04g12360 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g12360
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:9375086..9383764
RNA-Seq ExpressionMoc04g12360
SyntenyMoc04g12360
Gene Ontology termsGO:0043167 - ion binding (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5759684.1 putative RNA-directed DNA polymerase [Helianthus annuus]1.9e-2870.1Show/hide
Query:  MAYASKNIIVELNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYDLA
        MA ASKNI+ E+NKG KLN DNYEIW+MKIQYVLEEQEA EVL+++L EP EGN AQHKRD+E Y   K+KN+L  I LLSSMD+D+MR+F  YDLA
Subjt:  MAYASKNIIVELNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYDLA

KAF5799909.1 hypothetical protein HanXRQr2_Chr07g0309911 [Helianthus annuus]1.9e-2870.1Show/hide
Query:  MAYASKNIIVELNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYDLA
        MA ASKNI+ E+NKG KLN DNYEIW+MKIQYVLEEQEA EVL+++L EP EGN AQHKRD+E Y   K+KN+L  I LLSSMD+D+MR+F  YDLA
Subjt:  MAYASKNIIVELNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYDLA

MBW0583023.1 hypothetical protein [Austropuccinia psidii MF-1]3.3e-2870.1Show/hide
Query:  MAYASKNIIVELNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYDLA
        MA A+K+I+ ELNKGEKLN DNYEIW MKIQYVLEEQEALE L+  ++EPEEG  AQHKRDKE + A K+KNSL  I LLSSM+NDVMREF+ ++ A
Subjt:  MAYASKNIIVELNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYDLA

XP_009794640.1 PREDICTED: uncharacterized protein LOC104241402 [Nicotiana sylvestris]8.9e-2660.82Show/hide
Query:  MAYASKNIIVELNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYDLA
        M  ASKNI+ ELNKG KLN DNYE W++K+QYVLEEQEALE ++NV+ EPEEGN AQH+R+++ Y++ KKKNS+  I LLS++D+D++REF+ +  A
Subjt:  MAYASKNIIVELNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYDLA

XP_024036182.1 uncharacterized protein LOC112096753 [Citrus clementina]6.4e-2464.21Show/hide
Query:  MAYASKNIIVELNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYD
        M  ASKNI+VELNKGEKLN+DNY IW  KI Y+LEEQE LE L+N L EPE+G+ AQH RD E Y+A KKKNS   I LLSSM +D+M E+  Y+
Subjt:  MAYASKNIIVELNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYD

TrEMBL top hitse value%identityAlignment
A0A1R3HRE3 Uncharacterized protein3.2e-2154.26Show/hide
Query:  ASKNIIVELNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYDLA
        A+KNII +LNKGEKLN DNY IW  K+QY+LEEQ+ LE+L+ V++EP++G+  QHKRD++ ++  K+KN++ HI LLS M N ++ EF  Y  A
Subjt:  ASKNIIVELNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYDLA

A0A1R3HW78 Zinc finger, CCHC-type3.2e-2158.51Show/hide
Query:  ASKNIIVELNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYDLA
        A+KNIIV+LNKGEKLN DNY IW  K+QY+LEEQE LE+LS V+ EPE+G+ AQHKRD++  +  K+KNS+  I LLS M ++++ EF+ Y  A
Subjt:  ASKNIIVELNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYDLA

A0A1U7Y748 uncharacterized protein LOC1042414024.3e-2660.82Show/hide
Query:  MAYASKNIIVELNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYDLA
        M  ASKNI+ ELNKG KLN DNYE W++K+QYVLEEQEALE ++NV+ EPEEGN AQH+R+++ Y++ KKKNS+  I LLS++D+D++REF+ +  A
Subjt:  MAYASKNIIVELNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYDLA

A0A251RYZ8 Putative zinc finger, CCHC-type3.1e-2469.77Show/hide
Query:  LNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYDLA
        +NKG KLN DNYEIW+MKIQYVLEEQEA EVL+++L EP EGN AQHKRD+E Y   K+KN+L  I LLSSMD+D+MR+F  YDLA
Subjt:  LNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYDLA

S8CCZ0 CCHC-type domain-containing protein1.4e-2159.57Show/hide
Query:  ASKNIIVELNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYDLA
        A+K+I+ ELNK  KLN DNY+ W MKIQYV+EEQ+ LE LSN L +PE G  AQH+RD E Y+A K+KN    IILLS+MD+D+ REF  Y+ A
Subjt:  ASKNIIVELNKGEKLNEDNYEIWTMKIQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYDLA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGGAATGGATGCTCTGAGAGCCTTGTATGGAGGCAGTTGTCGGATGAAGAAGCCGACATAATGACTTACCAATCACTCAACCCACTCGATTTCGGAGCTTCCCT
CGTGTCGAAGGAAACTGTGTCCTACACGTCTTTATTCCAGGTTACCCTAGCCTCTGCAACAAGCAAAAGCGGTAGTGAAAGAGTAGAACTCAAATCCCAAGAAAAGTCAG
GAATTGCGCCTGACTCTGAAAATATGGCATATGCTTCAAAAAATATAATTGTTGAATTGAACAAAGGGGAGAAGCTTAATGAGGATAATTATGAGATCTGGACCATGAAA
ATCCAGTATGTACTGGAAGAGCAAGAGGCTCTAGAAGTATTAAGCAATGTTTTGATTGAGCCTGAGGAGGGTAATATTGCTCAACATAAGAGGGACAAAGAGACTTATGA
AGCCTCGAAGAAAAAAAACTCACTTACTCACATAATTTTGCTGAGCAGCATGGACAATGATGTCATGCGTGAGTTTCGCTCTTATGACCTTGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGGAATGGATGCTCTGAGAGCCTTGTATGGAGGCAGTTGTCGGATGAAGAAGCCGACATAATGACTTACCAATCACTCAACCCACTCGATTTCGGAGCTTCCCT
CGTGTCGAAGGAAACTGTGTCCTACACGTCTTTATTCCAGGTTACCCTAGCCTCTGCAACAAGCAAAAGCGGTAGTGAAAGAGTAGAACTCAAATCCCAAGAAAAGTCAG
GAATTGCGCCTGACTCTGAAAATATGGCATATGCTTCAAAAAATATAATTGTTGAATTGAACAAAGGGGAGAAGCTTAATGAGGATAATTATGAGATCTGGACCATGAAA
ATCCAGTATGTACTGGAAGAGCAAGAGGCTCTAGAAGTATTAAGCAATGTTTTGATTGAGCCTGAGGAGGGTAATATTGCTCAACATAAGAGGGACAAAGAGACTTATGA
AGCCTCGAAGAAAAAAAACTCACTTACTCACATAATTTTGCTGAGCAGCATGGACAATGATGTCATGCGTGAGTTTCGCTCTTATGACCTTGCCTAG
Protein sequenceShow/hide protein sequence
MGGNGCSESLVWRQLSDEEADIMTYQSLNPLDFGASLVSKETVSYTSLFQVTLASATSKSGSERVELKSQEKSGIAPDSENMAYASKNIIVELNKGEKLNEDNYEIWTMK
IQYVLEEQEALEVLSNVLIEPEEGNIAQHKRDKETYEASKKKNSLTHIILLSSMDNDVMREFRSYDLA