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Moc04g12590 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g12590
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:9652995..9660761
RNA-Seq ExpressionMoc04g12590
SyntenyMoc04g12590
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154103.1 uncharacterized protein LOC111021439 [Momordica charantia]3.7e-0852.17Show/hide
Query:  MDIDEPGQPENNWMNPLIEYLRDGTLPDERIEAQQLQRRAASYLIDINQLVVFG-KVSEFDLLEPDTTD
        MDID+ GQPE NW + LI+YL+DG LP E+IEAQQLQ+RAA Y++  + L   G  +     L PD  D
Subjt:  MDIDEPGQPENNWMNPLIEYLRDGTLPDERIEAQQLQRRAASYLIDINQLVVFG-KVSEFDLLEPDTTD

XP_022155342.1 uncharacterized protein LOC111022476 [Momordica charantia]2.0e-0945.37Show/hide
Query:  MDIDEPGQPENNWMNPLIEYLRDGTLPDERIEAQQLQRRAASYLIDINQLVVFG-KVSEFDLLEPDTTDL----------KSNQGNRLSRSLSEPKPINR
        MDIDE GQPE NW + LI+YLRDG LP E+IEAQQLQRRA  YL+  + L   G  +     + PD  D           +S+ G   +RSLS  K + +
Subjt:  MDIDEPGQPENNWMNPLIEYLRDGTLPDERIEAQQLQRRAASYLIDINQLVVFG-KVSEFDLLEPDTTDL----------KSNQGNRLSRSLSEPKPINR

Query:  GPHFTIRS
        G  +TI S
Subjt:  GPHFTIRS

XP_022156638.1 uncharacterized protein LOC111023488 [Momordica charantia]9.5e-2854.84Show/hide
Query:  MVHLADSANPAERRALNANNGAQREIDVKLAEDHARVGQEVEPPRRSTHNTNTIVPPVHPKPSKTNRGRGGTSRKTSRRATPAADLEALGRADDLSEDGD
        MV   +SAN AERRALN NN AQ E+D K+ E+  + GQEV+PPRRST N NTI+PP HP+  K NRGRGG +                   DDL EDGD
Subjt:  MVHLADSANPAERRALNANNGAQREIDVKLAEDHARVGQEVEPPRRSTHNTNTIVPPVHPKPSKTNRGRGGTSRKTSRRATPAADLEALGRADDLSEDGD

Query:  DQNPPLHPDDYEPVADNRGVDYSL
        D +PP+HPDDYEP  +N+G+DYSL
Subjt:  DQNPPLHPDDYEPVADNRGVDYSL

XP_022158579.1 uncharacterized protein LOC111025033 [Momordica charantia]6.8e-1055.07Show/hide
Query:  MDIDEPGQPENNWMNPLIEYLRDGTLPDERIEAQQLQRRAASYLIDINQLVVFG-KVSEFDLLEPDTTD
        MDID  GQPE NW +PLI+YL+DG LP E+IEAQQLQRRAA Y++  + L   G  +     L PD  D
Subjt:  MDIDEPGQPENNWMNPLIEYLRDGTLPDERIEAQQLQRRAASYLIDINQLVVFG-KVSEFDLLEPDTTD

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]2.9e-0847.13Show/hide
Query:  MVHLADSANPAERRALNANNGAQREIDVKLAEDHARVGQEVEPPRRSTHNTNTIVPPVHPKPSKTNRGRGGTSRKTSRRATPAADLE
        MV   DS N  +RRAL AN+G QRE+  ++ E     G   EP  RS   T   + P HPKP K NRGRGG SR+T+  A PA   E
Subjt:  MVHLADSANPAERRALNANNGAQREIDVKLAEDHARVGQEVEPPRRSTHNTNTIVPPVHPKPSKTNRGRGGTSRKTSRRATPAADLE

TrEMBL top hitse value%identityAlignment
A0A6J1DJC7 Ribonuclease H1.8e-0852.17Show/hide
Query:  MDIDEPGQPENNWMNPLIEYLRDGTLPDERIEAQQLQRRAASYLIDINQLVVFG-KVSEFDLLEPDTTD
        MDID+ GQPE NW + LI+YL+DG LP E+IEAQQLQ+RAA Y++  + L   G  +     L PD  D
Subjt:  MDIDEPGQPENNWMNPLIEYLRDGTLPDERIEAQQLQRRAASYLIDINQLVVFG-KVSEFDLLEPDTTD

A0A6J1DP30 uncharacterized protein LOC1110224769.6e-1045.37Show/hide
Query:  MDIDEPGQPENNWMNPLIEYLRDGTLPDERIEAQQLQRRAASYLIDINQLVVFG-KVSEFDLLEPDTTDL----------KSNQGNRLSRSLSEPKPINR
        MDIDE GQPE NW + LI+YLRDG LP E+IEAQQLQRRA  YL+  + L   G  +     + PD  D           +S+ G   +RSLS  K + +
Subjt:  MDIDEPGQPENNWMNPLIEYLRDGTLPDERIEAQQLQRRAASYLIDINQLVVFG-KVSEFDLLEPDTTDL----------KSNQGNRLSRSLSEPKPINR

Query:  GPHFTIRS
        G  +TI S
Subjt:  GPHFTIRS

A0A6J1DR60 uncharacterized protein LOC1110234884.6e-2854.84Show/hide
Query:  MVHLADSANPAERRALNANNGAQREIDVKLAEDHARVGQEVEPPRRSTHNTNTIVPPVHPKPSKTNRGRGGTSRKTSRRATPAADLEALGRADDLSEDGD
        MV   +SAN AERRALN NN AQ E+D K+ E+  + GQEV+PPRRST N NTI+PP HP+  K NRGRGG +                   DDL EDGD
Subjt:  MVHLADSANPAERRALNANNGAQREIDVKLAEDHARVGQEVEPPRRSTHNTNTIVPPVHPKPSKTNRGRGGTSRKTSRRATPAADLEALGRADDLSEDGD

Query:  DQNPPLHPDDYEPVADNRGVDYSL
        D +PP+HPDDYEP  +N+G+DYSL
Subjt:  DQNPPLHPDDYEPVADNRGVDYSL

A0A6J1DZJ1 uncharacterized protein LOC1110257381.4e-0847.13Show/hide
Query:  MVHLADSANPAERRALNANNGAQREIDVKLAEDHARVGQEVEPPRRSTHNTNTIVPPVHPKPSKTNRGRGGTSRKTSRRATPAADLE
        MV   DS N  +RRAL AN+G QRE+  ++ E     G   EP  RS   T   + P HPKP K NRGRGG SR+T+  A PA   E
Subjt:  MVHLADSANPAERRALNANNGAQREIDVKLAEDHARVGQEVEPPRRSTHNTNTIVPPVHPKPSKTNRGRGGTSRKTSRRATPAADLE

A0A6J1DZU0 Ribonuclease H3.3e-1055.07Show/hide
Query:  MDIDEPGQPENNWMNPLIEYLRDGTLPDERIEAQQLQRRAASYLIDINQLVVFG-KVSEFDLLEPDTTD
        MDID  GQPE NW +PLI+YL+DG LP E+IEAQQLQRRAA Y++  + L   G  +     L PD  D
Subjt:  MDIDEPGQPENNWMNPLIEYLRDGTLPDERIEAQQLQRRAASYLIDINQLVVFG-KVSEFDLLEPDTTD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATAGACGAACCAGGTCAACCCGAGAATAACTGGATGAACCCTTTGATCGAGTATTTAAGGGATGGGACTCTGCCTGATGAAAGGATAGAGGCCCAACAACTCCA
ACGACGAGCAGCTAGCTATTTGATTGATATAAATCAACTTGTTGTCTTTGGGAAAGTGTCCGAGTTCGATCTGCTGGAGCCCGACACGACCGACCTCAAATCCAACCAAG
GTAACCGCCTGTCGCGATCTTTGTCGGAACCTAAACCTATAAATAGAGGGCCTCATTTCACCATCAGGTCTTCCTTTTGGGTTTCAGGTCGGACCTACGACCGGATGGTT
CATCTAGCTGATTCTGCAAACCCCGCTGAACGGAGGGCTTTGAATGCGAATAATGGCGCTCAACGCGAGATTGACGTTAAGTTGGCTGAAGATCATGCTAGGGTAGGGCA
AGAGGTGGAACCACCTCGGAGGTCTACCCACAACACTAATACTATCGTGCCACCAGTACATCCGAAGCCCAGCAAGACCAACCGAGGTCGAGGTGGGACCTCGAGAAAGA
CCTCTCGAAGGGCCACGCCAGCTGCGGACCTTGAGGCCCTAGGCAGGGCAGATGACCTGTCGGAAGATGGAGATGACCAAAATCCACCCCTCCACCCCGATGACTATGAG
CCCGTTGCGGACAATAGAGGAGTCGACTATAGTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATATAGACGAACCAGGTCAACCCGAGAATAACTGGATGAACCCTTTGATCGAGTATTTAAGGGATGGGACTCTGCCTGATGAAAGGATAGAGGCCCAACAACTCCA
ACGACGAGCAGCTAGCTATTTGATTGATATAAATCAACTTGTTGTCTTTGGGAAAGTGTCCGAGTTCGATCTGCTGGAGCCCGACACGACCGACCTCAAATCCAACCAAG
GTAACCGCCTGTCGCGATCTTTGTCGGAACCTAAACCTATAAATAGAGGGCCTCATTTCACCATCAGGTCTTCCTTTTGGGTTTCAGGTCGGACCTACGACCGGATGGTT
CATCTAGCTGATTCTGCAAACCCCGCTGAACGGAGGGCTTTGAATGCGAATAATGGCGCTCAACGCGAGATTGACGTTAAGTTGGCTGAAGATCATGCTAGGGTAGGGCA
AGAGGTGGAACCACCTCGGAGGTCTACCCACAACACTAATACTATCGTGCCACCAGTACATCCGAAGCCCAGCAAGACCAACCGAGGTCGAGGTGGGACCTCGAGAAAGA
CCTCTCGAAGGGCCACGCCAGCTGCGGACCTTGAGGCCCTAGGCAGGGCAGATGACCTGTCGGAAGATGGAGATGACCAAAATCCACCCCTCCACCCCGATGACTATGAG
CCCGTTGCGGACAATAGAGGAGTCGACTATAGTTTGTGA
Protein sequenceShow/hide protein sequence
MDIDEPGQPENNWMNPLIEYLRDGTLPDERIEAQQLQRRAASYLIDINQLVVFGKVSEFDLLEPDTTDLKSNQGNRLSRSLSEPKPINRGPHFTIRSSFWVSGRTYDRMV
HLADSANPAERRALNANNGAQREIDVKLAEDHARVGQEVEPPRRSTHNTNTIVPPVHPKPSKTNRGRGGTSRKTSRRATPAADLEALGRADDLSEDGDDQNPPLHPDDYE
PVADNRGVDYSL