| GenBank top hits | e value | %identity | Alignment |
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| RVW41377.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 4.4e-50 | 54.05 | Show/hide |
Query: LALR---PREVEDFGVLDKPVM--EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEM
LALR P E+ + + V +W SNRLSL+I+KR +P+AFRGA+ +TNA DF AEI+K F +N + ETS LL SLISMKYK K NVRE+IMEM
Subjt: LALR---PREVEDFGVLDKPVM--EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEM
Query: SHLGSKLKPLKVEVSAELLVHLVLLSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD-----
SHL SKLK LK+E+S +LLVHLVL+SLP QF+Q KV+Y CQK +W +NELI +CV+EEERL + K +AH +G RK AS P+
Subjt: SHLGSKLKPLKVEVSAELLVHLVLLSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD-----
Query: ---CLSYRKQTDAEINIFVGGG
CLSYRK +DAE I+VG G
Subjt: ---CLSYRKQTDAEINIFVGGG
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| RVW51060.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 4.7e-52 | 47.08 | Show/hide |
Query: LALR---PREVEDFGVLDKPVM--EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEM
LALR P E+ + + V +W SNRLSL+I+KR +P+AFRG + +TNA DF AEI+K F +N + + S+LL SLISMKYK K NVRE+IMEM
Subjt: LALR---PREVEDFGVLDKPVM--EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEM
Query: SHLGSKLKPLKVEVSAELLVHLVLLSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD-----
SHL SKLK LK+E+S +LLVHLVL+SLP QF+Q KV+Y CQK +W +NELI +CV+EEERL + K G+AH +G RK AS P+
Subjt: SHLGSKLKPLKVEVSAELLVHLVLLSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD-----
Query: ---CLSYRKQTDAEINIFVGGGKFVAIELMPENNLEVEKMEKGSLFICKESNAQIAIEDSLKPRCRILVQGRSG
CLSYRK +DAE I+VG G+ V +E + L + + SL + K A++ ++ L R + + R G
Subjt: ---CLSYRKQTDAEINIFVGGGKFVAIELMPENNLEVEKMEKGSLFICKESNAQIAIEDSLKPRCRILVQGRSG
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| RVW93907.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 9.7e-50 | 56.78 | Show/hide |
Query: EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEMSHLGSKLKPLKVEVSAELLVHLVL
+W SNRLSL+I+KR +P+AFRGA+ +TNA DF EI+K F +N + ETS LL SLISMKYK K NVRE+IMEMSHL SKLK LK+E+S +LLVHLVL
Subjt: EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEMSHLGSKLKPLKVEVSAELLVHLVL
Query: LSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD--------CLSYRKQTDAEINIFVGGGK
+SLP QF+Q KV+Y CQK +W +NELI +CV+EEERL + K +AH +G RK AS P+ CLSYRK +DAE I+VG GK
Subjt: LSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD--------CLSYRKQTDAEINIFVGGGK
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| RVX09382.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 4.4e-50 | 54.05 | Show/hide |
Query: LALR---PREVEDFGVLDKPVM--EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEM
LALR P E+ + + V +W SNRLSL+I+KR +P+AFRGA+ +TNA DF AEI+K F +N + ETS LL SLISMKYK K NVRE+IMEM
Subjt: LALR---PREVEDFGVLDKPVM--EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEM
Query: SHLGSKLKPLKVEVSAELLVHLVLLSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD-----
SHL SKLK LK+E+S +LLVHLVL+SLP QF+Q KV+Y CQK +W +NELI +CV+EEERL + K +AH +G RK AS P+
Subjt: SHLGSKLKPLKVEVSAELLVHLVLLSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD-----
Query: ---CLSYRKQTDAEINIFVGGG
CLSYRK +DAE I+VG G
Subjt: ---CLSYRKQTDAEINIFVGGG
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| RVX12040.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 7.4e-50 | 48.81 | Show/hide |
Query: LALR---PREVEDFGVLDKPVM--EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEM
LALR P E+ + + V +W SNRLSL+I+KR +P+AFRGA+ +TNA DF A+I+K F +N + ETS LL SLISMKYK K NVRE+IMEM
Subjt: LALR---PREVEDFGVLDKPVM--EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEM
Query: SHLGSKLKPLKVEVSAELLVHLVLLSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD-----
SHL SKLK LK+E+S +LLVHLVL+SLP QF+Q KV+Y CQK +W +NELI +CV+EEERL + K +AH +G RK AS P+
Subjt: SHLGSKLKPLKVEVSAELLVHLVLLSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD-----
Query: ---CLSYRKQTDAEINIFVGGG--------KFVAIELMPENNLEVEKMEKGS
CLSYRK +DAE I+VG G +E++P N + +G+
Subjt: ---CLSYRKQTDAEINIFVGGG--------KFVAIELMPENNLEVEKMEKGS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438E116 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.1e-50 | 54.05 | Show/hide |
Query: LALR---PREVEDFGVLDKPVM--EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEM
LALR P E+ + + V +W SNRLSL+I+KR +P+AFRGA+ +TNA DF AEI+K F +N + ETS LL SLISMKYK K NVRE+IMEM
Subjt: LALR---PREVEDFGVLDKPVM--EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEM
Query: SHLGSKLKPLKVEVSAELLVHLVLLSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD-----
SHL SKLK LK+E+S +LLVHLVL+SLP QF+Q KV+Y CQK +W +NELI +CV+EEERL + K +AH +G RK AS P+
Subjt: SHLGSKLKPLKVEVSAELLVHLVLLSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD-----
Query: ---CLSYRKQTDAEINIFVGGG
CLSYRK +DAE I+VG G
Subjt: ---CLSYRKQTDAEINIFVGGG
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| A0A438ETL5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-52 | 47.08 | Show/hide |
Query: LALR---PREVEDFGVLDKPVM--EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEM
LALR P E+ + + V +W SNRLSL+I+KR +P+AFRG + +TNA DF AEI+K F +N + + S+LL SLISMKYK K NVRE+IMEM
Subjt: LALR---PREVEDFGVLDKPVM--EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEM
Query: SHLGSKLKPLKVEVSAELLVHLVLLSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD-----
SHL SKLK LK+E+S +LLVHLVL+SLP QF+Q KV+Y CQK +W +NELI +CV+EEERL + K G+AH +G RK AS P+
Subjt: SHLGSKLKPLKVEVSAELLVHLVLLSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD-----
Query: ---CLSYRKQTDAEINIFVGGGKFVAIELMPENNLEVEKMEKGSLFICKESNAQIAIEDSLKPRCRILVQGRSG
CLSYRK +DAE I+VG G+ V +E + L + + SL + K A++ ++ L R + + R G
Subjt: ---CLSYRKQTDAEINIFVGGGKFVAIELMPENNLEVEKMEKGSLFICKESNAQIAIEDSLKPRCRILVQGRSG
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| A0A438IB77 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.7e-50 | 56.78 | Show/hide |
Query: EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEMSHLGSKLKPLKVEVSAELLVHLVL
+W SNRLSL+I+KR +P+AFRGA+ +TNA DF EI+K F +N + ETS LL SLISMKYK K NVRE+IMEMSHL SKLK LK+E+S +LLVHLVL
Subjt: EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEMSHLGSKLKPLKVEVSAELLVHLVL
Query: LSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD--------CLSYRKQTDAEINIFVGGGK
+SLP QF+Q KV+Y CQK +W +NELI +CV+EEERL + K +AH +G RK AS P+ CLSYRK +DAE I+VG GK
Subjt: LSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD--------CLSYRKQTDAEINIFVGGGK
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| A0A438JKA4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.1e-50 | 54.05 | Show/hide |
Query: LALR---PREVEDFGVLDKPVM--EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEM
LALR P E+ + + V +W SNRLSL+I+KR +P+AFRGA+ +TNA DF AEI+K F +N + ETS LL SLISMKYK K NVRE+IMEM
Subjt: LALR---PREVEDFGVLDKPVM--EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEM
Query: SHLGSKLKPLKVEVSAELLVHLVLLSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD-----
SHL SKLK LK+E+S +LLVHLVL+SLP QF+Q KV+Y CQK +W +NELI +CV+EEERL + K +AH +G RK AS P+
Subjt: SHLGSKLKPLKVEVSAELLVHLVLLSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD-----
Query: ---CLSYRKQTDAEINIFVGGG
CLSYRK +DAE I+VG G
Subjt: ---CLSYRKQTDAEINIFVGGG
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| A0A438JSV4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.6e-50 | 48.81 | Show/hide |
Query: LALR---PREVEDFGVLDKPVM--EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEM
LALR P E+ + + V +W SNRLSL+I+KR +P+AFRGA+ +TNA DF A+I+K F +N + ETS LL SLISMKYK K NVRE+IMEM
Subjt: LALR---PREVEDFGVLDKPVM--EWYHSNRLSLLIIKRDLPDAFRGALFKGITNAKDFWAEIEKYFGENYRVETSILLQSLISMKYKSKDNVREHIMEM
Query: SHLGSKLKPLKVEVSAELLVHLVLLSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD-----
SHL SKLK LK+E+S +LLVHLVL+SLP QF+Q KV+Y CQK +W +NELI +CV+EEERL + K +AH +G RK AS P+
Subjt: SHLGSKLKPLKVEVSAELLVHLVLLSLPTQFDQVKVNYFCQKGEWIINELICYCVEEEERLLELKIGNAHFG--KHHQGPRKQNS---TASKDPD-----
Query: ---CLSYRKQTDAEINIFVGGG--------KFVAIELMPENNLEVEKMEKGS
CLSYRK +DAE I+VG G +E++P N + +G+
Subjt: ---CLSYRKQTDAEINIFVGGG--------KFVAIELMPENNLEVEKMEKGS
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