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Moc04g12910 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g12910
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein RETICULATA-RELATED 1, chloroplastic
Genome locationchr4:9932888..9933605
RNA-Seq ExpressionMoc04g12910
SyntenyMoc04g12910
Gene Ontology termsGO:0006631 - fatty acid metabolic process (biological process)
GO:0008610 - lipid biosynthetic process (biological process)
GO:0044249 - cellular biosynthetic process (biological process)
GO:0099402 - plant organ development (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0031969 - chloroplast membrane (cellular component)
GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449416.1 PREDICTED: protein RETICULATA-RELATED 1, chloroplastic [Cucumis melo]3.2e-3675.19Show/hide
Query:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTT---SSPSSSSSAVSDGDSIALLERCFVAPSAPA------ATSSSSLG
        M+HAVFQTAQIMPINTQL T KLWL   P +VKLGPS   R++ VLVVKAFTT   SSPSSSSS V  GDSIA LERCF  PSAPA      A SSSS G
Subjt:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTT---SSPSSSSSAVSDGDSIALLERCFVAPSAPA------ATSSSSLG

Query:  PVMKGQYGSLGSVTLEKSKLDLSQKQSKSSPET
        PVMKGQ+G+LGSVTLEKSKLDLSQKQSKSSPET
Subjt:  PVMKGQYGSLGSVTLEKSKLDLSQKQSKSSPET
XP_022155012.1 protein RETICULATA-RELATED 1, chloroplastic [Momordica charantia]4.4e-57100Show/hide
Query:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSPSSSSSAVSDGDSIALLERCFVAPSAPAATSSSSLGPVMKGQYGS
        MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSPSSSSSAVSDGDSIALLERCFVAPSAPAATSSSSLGPVMKGQYGS
Subjt:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSPSSSSSAVSDGDSIALLERCFVAPSAPAATSSSSLGPVMKGQYGS

Query:  LGSVTLEKSKLDLSQKQSKSSPET
        LGSVTLEKSKLDLSQKQSKSSPET
Subjt:  LGSVTLEKSKLDLSQKQSKSSPET
XP_022927672.1 protein RETICULATA-RELATED 1, chloroplastic [Cucurbita moschata]4.2e-3672.59Show/hide
Query:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSP----SSSSSAVSDGDSIALLERCFVAPSAPA-------ATSSSS
        M+HAVFQTAQIMPI+TQLPTTKLWLPPP   VKLG  Q  R++ VLVVKA TT SP    SSSSS  SDG+SIALLERCF APS+PA       ATSSSS
Subjt:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSP----SSSSSAVSDGDSIALLERCFVAPSAPA-------ATSSSS

Query:  LGPVMKGQYGSLGSVTLEKSKLDLSQKQSKSSPET
         GPVMKG+YG+LG+VTLEKSKLD+SQKQ++SSPET
Subjt:  LGPVMKGQYGSLGSVTLEKSKLDLSQKQSKSSPET
XP_022989621.1 protein RETICULATA-RELATED 1, chloroplastic [Cucurbita maxima]4.2e-3672.59Show/hide
Query:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSP----SSSSSAVSDGDSIALLERCFVAPSAPA-------ATSSSS
        M+HAVFQTAQIMPI+TQLPTTKLWLPPP   VKLG  Q  R++ VLVVKA TT SP    SSSSS  SDG+SIALLERCF APS+PA       ATSSSS
Subjt:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSP----SSSSSAVSDGDSIALLERCFVAPSAPA-------ATSSSS

Query:  LGPVMKGQYGSLGSVTLEKSKLDLSQKQSKSSPET
         GPVMKG+YG+LG+VTLEKSKLD+SQKQ++SSPET
Subjt:  LGPVMKGQYGSLGSVTLEKSKLDLSQKQSKSSPET
XP_038888281.1 protein RETICULATA-RELATED 1, chloroplastic [Benincasa hispida]8.5e-3776.69Show/hide
Query:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSPSSSSSA---VSDGDSIALLERCFVAPSAPA------ATSSSSLG
        M+HAVFQTAQIMPINTQLPT KLWL   P  VKLGP    R++ VLVVKAFTTS PSSSSS+   VS  DSIALLERCF APSAPA      A SSSS G
Subjt:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSPSSSSSA---VSDGDSIALLERCFVAPSAPA------ATSSSSLG

Query:  PVMKGQYGSLGSVTLEKSKLDLSQKQSKSSPET
        PVMKGQYG+LGSVTLEKSKLDLSQKQSKSSPET
Subjt:  PVMKGQYGSLGSVTLEKSKLDLSQKQSKSSPET
TrEMBL top hitse value%identityAlignment
A0A1S3BMX1 protein RETICULATA-RELATED 1, chloroplastic1.6e-3675.19Show/hide
Query:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTT---SSPSSSSSAVSDGDSIALLERCFVAPSAPA------ATSSSSLG
        M+HAVFQTAQIMPINTQL T KLWL   P +VKLGPS   R++ VLVVKAFTT   SSPSSSSS V  GDSIA LERCF  PSAPA      A SSSS G
Subjt:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTT---SSPSSSSSAVSDGDSIALLERCFVAPSAPA------ATSSSSLG

Query:  PVMKGQYGSLGSVTLEKSKLDLSQKQSKSSPET
        PVMKGQ+G+LGSVTLEKSKLDLSQKQSKSSPET
Subjt:  PVMKGQYGSLGSVTLEKSKLDLSQKQSKSSPET
A0A5D3CSL0 Protein RETICULATA-RELATED 16.0e-3675Show/hide
Query:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTT---SSPSSSSSAVSDGDSIALLERCFVAPSAPA------ATSSSSLG
        M+HAVFQTAQIMPINTQL T KLWL   P +VKLGPS   R++ VLVVKAFTT   SSPSSSSS V  GDSIA LERCF  PSAPA      A SSSS G
Subjt:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTT---SSPSSSSSAVSDGDSIALLERCFVAPSAPA------ATSSSSLG

Query:  PVMKGQYGSLGSVTLEKSKLDLSQKQSKSSPE
        PVMKGQ+G+LGSVTLEKSKLDLSQKQSKSSPE
Subjt:  PVMKGQYGSLGSVTLEKSKLDLSQKQSKSSPE
A0A6J1DN85 protein RETICULATA-RELATED 1, chloroplastic2.1e-57100Show/hide
Query:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSPSSSSSAVSDGDSIALLERCFVAPSAPAATSSSSLGPVMKGQYGS
        MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSPSSSSSAVSDGDSIALLERCFVAPSAPAATSSSSLGPVMKGQYGS
Subjt:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSPSSSSSAVSDGDSIALLERCFVAPSAPAATSSSSLGPVMKGQYGS

Query:  LGSVTLEKSKLDLSQKQSKSSPET
        LGSVTLEKSKLDLSQKQSKSSPET
Subjt:  LGSVTLEKSKLDLSQKQSKSSPET
A0A6J1EHU7 protein RETICULATA-RELATED 1, chloroplastic2.1e-3672.59Show/hide
Query:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSP----SSSSSAVSDGDSIALLERCFVAPSAPA-------ATSSSS
        M+HAVFQTAQIMPI+TQLPTTKLWLPPP   VKLG  Q  R++ VLVVKA TT SP    SSSSS  SDG+SIALLERCF APS+PA       ATSSSS
Subjt:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSP----SSSSSAVSDGDSIALLERCFVAPSAPA-------ATSSSS

Query:  LGPVMKGQYGSLGSVTLEKSKLDLSQKQSKSSPET
         GPVMKG+YG+LG+VTLEKSKLD+SQKQ++SSPET
Subjt:  LGPVMKGQYGSLGSVTLEKSKLDLSQKQSKSSPET
A0A6J1JKL8 protein RETICULATA-RELATED 1, chloroplastic2.1e-3672.59Show/hide
Query:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSP----SSSSSAVSDGDSIALLERCFVAPSAPA-------ATSSSS
        M+HAVFQTAQIMPI+TQLPTTKLWLPPP   VKLG  Q  R++ VLVVKA TT SP    SSSSS  SDG+SIALLERCF APS+PA       ATSSSS
Subjt:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSP----SSSSSAVSDGDSIALLERCFVAPSAPA-------ATSSSS

Query:  LGPVMKGQYGSLGSVTLEKSKLDLSQKQSKSSPET
         GPVMKG+YG+LG+VTLEKSKLD+SQKQ++SSPET
Subjt:  LGPVMKGQYGSLGSVTLEKSKLDLSQKQSKSSPET
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G24690.1 Protein of unknown function (DUF3411)9.5e-1041.98Show/hide
Query:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSPSSSSSAVSDGDSIALLERCFVAPSAPAATSSSS--------LGP
        M+H VFQ+  + P    L   K  LP P PLV L         P  + + F     +SSSS + D DS++ LERC   PS     +SSS        + P
Subjt:  MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSPSSSSSAVSDGDSIALLERCFVAPSAPAATSSSS--------LGP

Query:  VMKGQYGSLGSVTLEKSKLDLSQKQSKSSPE
        VMKG++GS+G+VTLEK KLD++QK S++SPE
Subjt:  VMKGQYGSLGSVTLEKSKLDLSQKQSKSSPE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCATGCGGTGTTCCAGACGGCGCAAATCATGCCCATTAACACCCAGCTTCCCACCACCAAGCTATGGCTGCCGCCGCCGCCGCCGCTTGTAAAGCTCGGTCCCTC
TCAGACCCCACGGAGCAAACCAGTTCTGGTGGTGAAGGCTTTCACCACTTCTTCTCCATCCTCGTCTTCTTCGGCCGTTTCAGATGGGGATTCCATTGCTCTGTTGGAGC
GTTGCTTTGTAGCACCGTCGGCACCTGCCGCCACATCTTCCTCCTCTCTCGGTCCTGTTATGAAAGGCCAATATGGTTCCCTTGGGTCTGTTACCTTGGAGAAATCGAAG
CTTGATTTATCTCAGAAGCAATCAAAGTCCAGTCCCGAGACTTGTGGTTGGATAGACGTGGTGATTTCCACTAGTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCATGCGGTGTTCCAGACGGCGCAAATCATGCCCATTAACACCCAGCTTCCCACCACCAAGCTATGGCTGCCGCCGCCGCCGCCGCTTGTAAAGCTCGGTCCCTC
TCAGACCCCACGGAGCAAACCAGTTCTGGTGGTGAAGGCTTTCACCACTTCTTCTCCATCCTCGTCTTCTTCGGCCGTTTCAGATGGGGATTCCATTGCTCTGTTGGAGC
GTTGCTTTGTAGCACCGTCGGCACCTGCCGCCACATCTTCCTCCTCTCTCGGTCCTGTTATGAAAGGCCAATATGGTTCCCTTGGGTCTGTTACCTTGGAGAAATCGAAG
CTTGATTTATCTCAGAAGCAATCAAAGTCCAGTCCCGAGACTTGTGGTTGGATAGACGTGGTGATTTCCACTAGTTGTTGA
Protein sequenceShow/hide protein sequence
MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSPSSSSSAVSDGDSIALLERCFVAPSAPAATSSSSLGPVMKGQYGSLGSVTLEKSK
LDLSQKQSKSSPETCGWIDVVISTSC