CuGenDBv2

Gene ID	Moc04g13440
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Genome location	chr4:10416833..10417174
RNA-Seq Expression	Moc04g13440
Synteny	Moc04g13440
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR005162 - Retrotransposon gag domain

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022141796.1 uncharacterized protein LOC111012081 [Momordica charantia]

2.3e-51

90.27

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Query:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ
        +EAPIPPKFK PT+KPYDG KDPKDYVEVFEGLMDFQ  +DAIKCRAFQIALTGSARLWYRRLPARSISTYSQLR+EF++QFSSRHYD+KTATHLATIRQ
Subjt:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ

Query:  KEGETLREYVTRF
        KEGETLREYVTRF
Subjt:  KEGETLREYVTRF

XP_022152362.1 uncharacterized protein LOC111020105 [Momordica charantia]

1.7e-51

92.04

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Query:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ
        +EA IPPKFKTPTMKPYDG KDPKDYVEVFEGL+DFQ  TDAIKCRAFQIA TGSARLWYR+LPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ
Subjt:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ

Query:  KEGETLREYVTRF
        K+GETLREYVTRF
Subjt:  KEGETLREYVTRF

XP_022156542.1 uncharacterized protein LOC111023421 [Momordica charantia]

3.0e-51

90.27

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Query:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ
        +EAPIPPKFK PT+KPYDG KDPKDYVEVFEGLMDFQ A+DAIKCRAFQIALTGSARLWYRRLP RSISTYSQLR+EF++QFSSRHYD+KTATHLATIRQ
Subjt:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ

Query:  KEGETLREYVTRF
        KEGETLREYVTRF
Subjt:  KEGETLREYVTRF

XP_022157897.1 uncharacterized protein LOC111024503 [Momordica charantia]

1.1e-50

92.92

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Query:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ
        +E PIPPKFKTPTMK YD  KDPKDYVEVFEGLMDFQ ATDAIKC AFQIALTGSARLWYRRLPARSISTYSQLRKEFISQF SRHYDRKTATHLATIRQ
Subjt:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ

Query:  KEGETLREYVTRF
        KEGETLREYVTRF
Subjt:  KEGETLREYVTRF

XP_022159250.1 uncharacterized protein LOC111025663 [Momordica charantia]

8.4e-54

96.46

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Query:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ
        +EAPIPPKFKTPTMKPYDG KDPKDYVEVFEGLMDFQ ATDAIKCRAFQIALT SARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ
Subjt:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ

Query:  KEGETLREYVTRF
        KEGETLREYVTRF
Subjt:  KEGETLREYVTRF

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CKB3 uncharacterized protein LOC111012081

1.1e-51

90.27

Show/hide

Query:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ
        +EAPIPPKFK PT+KPYDG KDPKDYVEVFEGLMDFQ  +DAIKCRAFQIALTGSARLWYRRLPARSISTYSQLR+EF++QFSSRHYD+KTATHLATIRQ
Subjt:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ

Query:  KEGETLREYVTRF
        KEGETLREYVTRF
Subjt:  KEGETLREYVTRF

A0A6J1DG02 uncharacterized protein LOC111020105

8.4e-52

92.04

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Query:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ
        +EA IPPKFKTPTMKPYDG KDPKDYVEVFEGL+DFQ  TDAIKCRAFQIA TGSARLWYR+LPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ
Subjt:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ

Query:  KEGETLREYVTRF
        K+GETLREYVTRF
Subjt:  KEGETLREYVTRF

A0A6J1DS95 uncharacterized protein LOC111023421

1.4e-51

90.27

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Query:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ
        +EAPIPPKFK PT+KPYDG KDPKDYVEVFEGLMDFQ A+DAIKCRAFQIALTGSARLWYRRLP RSISTYSQLR+EF++QFSSRHYD+KTATHLATIRQ
Subjt:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ

Query:  KEGETLREYVTRF
        KEGETLREYVTRF
Subjt:  KEGETLREYVTRF

A0A6J1DVR0 uncharacterized protein LOC111024503

5.5e-51

92.92

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Query:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ
        +E PIPPKFKTPTMK YD  KDPKDYVEVFEGLMDFQ ATDAIKC AFQIALTGSARLWYRRLPARSISTYSQLRKEFISQF SRHYDRKTATHLATIRQ
Subjt:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ

Query:  KEGETLREYVTRF
        KEGETLREYVTRF
Subjt:  KEGETLREYVTRF

A0A6J1DY58 uncharacterized protein LOC111025663

4.0e-54

96.46

Show/hide

Query:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ
        +EAPIPPKFKTPTMKPYDG KDPKDYVEVFEGLMDFQ ATDAIKCRAFQIALT SARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ
Subjt:  MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQ

Query:  KEGETLREYVTRF
        KEGETLREYVTRF
Subjt:  KEGETLREYVTRF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGAAGCCCCAATCCCTCCGAAGTTCAAGACTCCCACCATGAAGCCCTATGATGGGTTTAAGGACCCTAAAGACTATGTTGAGGTCTTCGAGGGCCTCATGGACTTTCA
AGTGGCAACAGATGCAATAAAATGTCGCGCCTTCCAGATCGCGCTTACCGGCAGCGCGCGCCTGTGGTACCGGAGACTGCCGGCTAGGTCGATATCAACCTATTCTCAGC
TGAGAAAGGAGTTCATCAGCCAATTCTCTTCTCGGCACTACGATAGGAAAACAGCAACTCACCTCGCCACCATCAGACAGAAGGAAGGTGAGACGCTGAGAGAATATGTC
ACAAGGTTCTAG

mRNA sequence

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Protein sequence

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MEAPIPPKFKTPTMKPYDGFKDPKDYVEVFEGLMDFQVATDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFSSRHYDRKTATHLATIRQKEGETLREYV
TRF

Moc04g13440 (gene) of Bitter gourd (OHB3-1) v2 genome