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Moc04g13540 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g13540
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPolyprotein
Genome locationchr4:10472167..10473918
RNA-Seq ExpressionMoc04g13540
SyntenyMoc04g13540
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056776.1 Enzymatic polyprotein [Cucumis melo var. makuwa]4.1e-4580.3Show/hide
Query:  MLSKLLSKISPHSQPIID-TASS--SSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEF
        MLSKLLSK+SPHS  IID TASS  SSSS S  +S+ND S  LAEHNSAE HLA+VE+RLKNWSIPK++ NQVYKINTF FSQQDVIVITEENVAMKDEF
Subjt:  MLSKLLSKISPHSQPIID-TASS--SSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEF

Query:  TKITLLPEETLFKVKNKFKYLHIGCVQVALKP
        T I LLPEETLFKV+++FKYLHIGCVQVALKP
Subjt:  TKITLLPEETLFKVKNKFKYLHIGCVQVALKP

KAA0059217.1 Enzymatic polyprotein [Cucumis melo var. makuwa]4.1e-4580.3Show/hide
Query:  MLSKLLSKISPHSQPIID-TASS--SSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEF
        MLSKLLSK+SPHS  IID TASS  SSSS S  +S+ND S  LAEHNSAE HLA+VE+RLKNWSIPK++ NQVYKINTF FSQQDVIVITEENVAMKDEF
Subjt:  MLSKLLSKISPHSQPIID-TASS--SSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEF

Query:  TKITLLPEETLFKVKNKFKYLHIGCVQVALKP
        T I LLPEETLFKV+++FKYLHIGCVQVALKP
Subjt:  TKITLLPEETLFKVKNKFKYLHIGCVQVALKP

KAA0066201.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.5e-4780.62Show/hide
Query:  MLSKLLSKISPHSQPIIDTASSSSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEFTKI
        M+SKLLSK+SPHS  I+DT SSSS S    +S +D SK LAEHNS E HLA+VE+RLKNWSIPKIDP+QVYKINTF FSQQDVIVI EENVAMKDEFT I
Subjt:  MLSKLLSKISPHSQPIIDTASSSSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEFTKI

Query:  TLLPEETLFKVKNKFKYLHIGCVQVALKP
         LLPEETLFKVKNKFKYLHIGCVQVALKP
Subjt:  TLLPEETLFKVKNKFKYLHIGCVQVALKP

TYJ97599.1 Enzymatic polyprotein [Cucumis melo var. makuwa]4.1e-4580.3Show/hide
Query:  MLSKLLSKISPHSQPIID-TASS--SSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEF
        MLSKLLSK+SPHS  IID TASS  SSSS S  +S+ND S  LAEHNSAE HLA+VE+RLKNWSIPK++ NQVYKINTF FSQQDVIVITEENVAMKDEF
Subjt:  MLSKLLSKISPHSQPIID-TASS--SSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEF

Query:  TKITLLPEETLFKVKNKFKYLHIGCVQVALKP
        T I LLPEETLFKV+++FKYLHIGCVQVALKP
Subjt:  TKITLLPEETLFKVKNKFKYLHIGCVQVALKP

TYK01213.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.5e-4780.62Show/hide
Query:  MLSKLLSKISPHSQPIIDTASSSSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEFTKI
        M+SKLLSK+SPHS  I+DT SSSS S    +S +D SK LAEHNS E HLA+VE+RLKNWSIPKIDP+QVYKINTF FSQQDVIVI EENVAMKDEFT I
Subjt:  MLSKLLSKISPHSQPIIDTASSSSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEFTKI

Query:  TLLPEETLFKVKNKFKYLHIGCVQVALKP
         LLPEETLFKVKNKFKYLHIGCVQVALKP
Subjt:  TLLPEETLFKVKNKFKYLHIGCVQVALKP

TrEMBL top hitse value%identityAlignment
A0A5A7T8S7 Polyprotein2.0e-4580.3Show/hide
Query:  MLSKLLSKISPHSQPIID-TASS--SSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEF
        MLSKLLSK+SPHS  IID TASS  SSSS S  +S+ND S  LAEHNSAE HLA+VE+RLKNWSIPK++ NQVYKINTF FSQQDVIVITEENVAMKDEF
Subjt:  MLSKLLSKISPHSQPIID-TASS--SSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEF

Query:  TKITLLPEETLFKVKNKFKYLHIGCVQVALKP
        T I LLPEETLFKV+++FKYLHIGCVQVALKP
Subjt:  TKITLLPEETLFKVKNKFKYLHIGCVQVALKP

A0A5A7UX67 Enzymatic polyprotein2.0e-4580.3Show/hide
Query:  MLSKLLSKISPHSQPIID-TASS--SSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEF
        MLSKLLSK+SPHS  IID TASS  SSSS S  +S+ND S  LAEHNSAE HLA+VE+RLKNWSIPK++ NQVYKINTF FSQQDVIVITEENVAMKDEF
Subjt:  MLSKLLSKISPHSQPIID-TASS--SSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEF

Query:  TKITLLPEETLFKVKNKFKYLHIGCVQVALKP
        T I LLPEETLFKV+++FKYLHIGCVQVALKP
Subjt:  TKITLLPEETLFKVKNKFKYLHIGCVQVALKP

A0A5A7VKK8 Enzymatic polyprotein7.3e-4880.62Show/hide
Query:  MLSKLLSKISPHSQPIIDTASSSSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEFTKI
        M+SKLLSK+SPHS  I+DT SSSS S    +S +D SK LAEHNS E HLA+VE+RLKNWSIPKIDP+QVYKINTF FSQQDVIVI EENVAMKDEFT I
Subjt:  MLSKLLSKISPHSQPIIDTASSSSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEFTKI

Query:  TLLPEETLFKVKNKFKYLHIGCVQVALKP
         LLPEETLFKVKNKFKYLHIGCVQVALKP
Subjt:  TLLPEETLFKVKNKFKYLHIGCVQVALKP

A0A5D3BEY3 Enzymatic polyprotein2.0e-4580.3Show/hide
Query:  MLSKLLSKISPHSQPIID-TASS--SSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEF
        MLSKLLSK+SPHS  IID TASS  SSSS S  +S+ND S  LAEHNSAE HLA+VE+RLKNWSIPK++ NQVYKINTF FSQQDVIVITEENVAMKDEF
Subjt:  MLSKLLSKISPHSQPIID-TASS--SSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEF

Query:  TKITLLPEETLFKVKNKFKYLHIGCVQVALKP
        T I LLPEETLFKV+++FKYLHIGCVQVALKP
Subjt:  TKITLLPEETLFKVKNKFKYLHIGCVQVALKP

A0A5D3BN76 Enzymatic polyprotein7.3e-4880.62Show/hide
Query:  MLSKLLSKISPHSQPIIDTASSSSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEFTKI
        M+SKLLSK+SPHS  I+DT SSSS S    +S +D SK LAEHNS E HLA+VE+RLKNWSIPKIDP+QVYKINTF FSQQDVIVI EENVAMKDEFT I
Subjt:  MLSKLLSKISPHSQPIIDTASSSSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEFTKI

Query:  TLLPEETLFKVKNKFKYLHIGCVQVALKP
         LLPEETLFKVKNKFKYLHIGCVQVALKP
Subjt:  TLLPEETLFKVKNKFKYLHIGCVQVALKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTCCAAACTTCTATCTAAAATCTCTCCCCACTCTCAACCGATCATTGACACAGCTTCCTCTTCTTCCTCTTCTTTGAGCAAACAAAAATCAGAAAATGATTTTTC
AAAGGTTTTAGCCGAGCATAATTCAGCCGAAGACCATCTGGCAAAGGTTGAAGATCGTCTCAAAAATTGGTCTATCCCTAAGATAGATCCAAATCAGGTATATAAGATAA
ATACCTTCAAGTTCTCCCAGCAAGATGTTATCGTTATCACCGAGGAGAACGTTGCTATGAAGGATGAATTCACTAAGATCACCCTTCTCCCTGAAGAAACCCTCTTCAAG
GTCAAAAACAAATTCAAGTACCTCCATATTGGATGCGTTCAAGTTGCTTTGAAACCGAGGATTGCAGATTCTGTATATCATCGTAAAGGCTTCTCCGGCGTCCGATTAGG
CCATTCCATCCAAGGTCTTACTCATGGCCTCTCGCCTAAACTGCCCAAGGAACACCTTCGATCTTCGACCAAGCTTGCCTTTTCCTTCACGAAAACAGACTGGGATAGTG
ATGATAAGATCGGAATACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTCCAAACTTCTATCTAAAATCTCTCCCCACTCTCAACCGATCATTGACACAGCTTCCTCTTCTTCCTCTTCTTTGAGCAAACAAAAATCAGAAAATGATTTTTC
AAAGGTTTTAGCCGAGCATAATTCAGCCGAAGACCATCTGGCAAAGGTTGAAGATCGTCTCAAAAATTGGTCTATCCCTAAGATAGATCCAAATCAGGTATATAAGATAA
ATACCTTCAAGTTCTCCCAGCAAGATGTTATCGTTATCACCGAGGAGAACGTTGCTATGAAGGATGAATTCACTAAGATCACCCTTCTCCCTGAAGAAACCCTCTTCAAG
GTCAAAAACAAATTCAAGTACCTCCATATTGGATGCGTTCAAGTTGCTTTGAAACCGAGGATTGCAGATTCTGTATATCATCGTAAAGGCTTCTCCGGCGTCCGATTAGG
CCATTCCATCCAAGGTCTTACTCATGGCCTCTCGCCTAAACTGCCCAAGGAACACCTTCGATCTTCGACCAAGCTTGCCTTTTCCTTCACGAAAACAGACTGGGATAGTG
ATGATAAGATCGGAATACAATGA
Protein sequenceShow/hide protein sequence
MLSKLLSKISPHSQPIIDTASSSSSSLSKQKSENDFSKVLAEHNSAEDHLAKVEDRLKNWSIPKIDPNQVYKINTFKFSQQDVIVITEENVAMKDEFTKITLLPEETLFK
VKNKFKYLHIGCVQVALKPRIADSVYHRKGFSGVRLGHSIQGLTHGLSPKLPKEHLRSSTKLAFSFTKTDWDSDDKIGIQ