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Moc04g14280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g14280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:10936765..10937967
RNA-Seq ExpressionMoc04g14280
SyntenyMoc04g14280
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151609.1 uncharacterized protein LOC111019523 [Momordica charantia]1.2e-3353.42Show/hide
Query:  MAYPLPPKMKKPDMKPYDGSTDPIDHIDLYEGLMELNAAGDEMKCRA----------------------------------KLAQHDRKMPDTHLLTIYQ
        MAYPLPPKMKKPDMKPYD   +PIDHI+LYEGLMEL+A GD+MKCRA                                    AQHDRK  DTHLLTI+Q
Subjt:  MAYPLPPKMKKPDMKPYDGSTDPIDHIDLYEGLMELNAAGDEMKCRA----------------------------------KLAQHDRKMPDTHLLTIYQ

Query:  SEDESLRDFVERFMAEKIKVLDCSDDAARMTFTSAINNPDPVHSLPSNQLGLMPKRSSEDA
         E ESL +FV RF+ EKIKVLDCS+D ARMTF S IN P+ + S       L PKR+  +A
Subjt:  SEDESLRDFVERFMAEKIKVLDCSDDAARMTFTSAINNPDPVHSLPSNQLGLMPKRSSEDA

XP_022156542.1 uncharacterized protein LOC111023421 [Momordica charantia]1.2e-1737.01Show/hide
Query:  DAEVEQGKQEDLPFTTPIMAYPLPPKMKKPDMKPYDGSTDPIDHIDLYEGLMELNAAGDEMKCRA------------------------------KLAQ-
        D  +  G   + PFT+ ++  P+PPK K P +KPYDG+ DP D+++++EGLM+  AA D +KCRA                               LAQ 
Subjt:  DAEVEQGKQEDLPFTTPIMAYPLPPKMKKPDMKPYDGSTDPIDHIDLYEGLMELNAAGDEMKCRA------------------------------KLAQ-

Query:  ---HDRKMPDTHLLTIYQSEDESLRDFVERFMAEKIKVLDCSDDAARMTFTSAI
           H  K   THL TI Q E E+LR++V RF  E++KV  CSDD+A   F + +
Subjt:  ---HDRKMPDTHLLTIYQSEDESLRDFVERFMAEKIKVLDCSDDAARMTFTSAI

XP_022158520.1 uncharacterized protein LOC111024991 [Momordica charantia]1.3e-2262.77Show/hide
Query:  GDTNALGPSVKVWEVNVQKHTAESLIPKDPARGKAPTVSGEEDALPRVSVHEQLNLKTRRTATMDPMEGLRVHITTEARCLCQTSNERNTPQQA
        GD +A GPS+++ E +V +HTAESL+P+DPA GKAPT+S EED  P+V V E LNL+ R+TAT+DP EGLRVHITTEA  L Q   ERN  QQA
Subjt:  GDTNALGPSVKVWEVNVQKHTAESLIPKDPARGKAPTVSGEEDALPRVSVHEQLNLKTRRTATMDPMEGLRVHITTEARCLCQTSNERNTPQQA

XP_022159160.1 uncharacterized protein LOC111025585 [Momordica charantia]3.8e-1941.98Show/hide
Query:  HDAEVEQGKQEDLPFTTPIMAYPLPPKMKKPDMKPYDGSTDPIDHIDLYEGLMELNAAGDEMKCRA-KLA---------QHDRKMPDTHLLTIYQSEDES
        +++    G+  + PFT+ ++  P+PPK K P MKPYDGS DP D+++++E LM+  AA D +KCRA ++A         +  RK+  THL TI Q E E+
Subjt:  HDAEVEQGKQEDLPFTTPIMAYPLPPKMKKPDMKPYDGSTDPIDHIDLYEGLMELNAAGDEMKCRA-KLA---------QHDRKMPDTHLLTIYQSEDES

Query:  LRDFVERFMAEKIKVLDCSDDAARMTFTSAI
        LR++V RF  E++KV  CSDD+A   F + +
Subjt:  LRDFVERFMAEKIKVLDCSDDAARMTFTSAI

XP_022159250.1 uncharacterized protein LOC111025663 [Momordica charantia]4.2e-1837.66Show/hide
Query:  DAEVEQGKQEDLPFTTPIMAYPLPPKMKKPDMKPYDGSTDPIDHIDLYEGLMELNAAGDEMKCRA-KLAQHD------RKMP------------------
        +   + G   + PFT+ I+  P+PPK K P MKPYDGS DP D+++++EGLM+  AA D +KCRA ++A  D      R++P                  
Subjt:  DAEVEQGKQEDLPFTTPIMAYPLPPKMKKPDMKPYDGSTDPIDHIDLYEGLMELNAAGDEMKCRA-KLAQHD------RKMP------------------

Query:  ---------DTHLLTIYQSEDESLRDFVERFMAEKIKVLDCSDDAARMTFTSAI
                  THL TI Q E E+LR++V RF+ E++KV  CSDD+A   F + +
Subjt:  ---------DTHLLTIYQSEDESLRDFVERFMAEKIKVLDCSDDAARMTFTSAI

TrEMBL top hitse value%identityAlignment
A0A6J1DDJ7 uncharacterized protein LOC1110195235.9e-3453.42Show/hide
Query:  MAYPLPPKMKKPDMKPYDGSTDPIDHIDLYEGLMELNAAGDEMKCRA----------------------------------KLAQHDRKMPDTHLLTIYQ
        MAYPLPPKMKKPDMKPYD   +PIDHI+LYEGLMEL+A GD+MKCRA                                    AQHDRK  DTHLLTI+Q
Subjt:  MAYPLPPKMKKPDMKPYDGSTDPIDHIDLYEGLMELNAAGDEMKCRA----------------------------------KLAQHDRKMPDTHLLTIYQ

Query:  SEDESLRDFVERFMAEKIKVLDCSDDAARMTFTSAINNPDPVHSLPSNQLGLMPKRSSEDA
         E ESL +FV RF+ EKIKVLDCS+D ARMTF S IN P+ + S       L PKR+  +A
Subjt:  SEDESLRDFVERFMAEKIKVLDCSDDAARMTFTSAINNPDPVHSLPSNQLGLMPKRSSEDA

A0A6J1DS95 uncharacterized protein LOC1110234215.9e-1837.01Show/hide
Query:  DAEVEQGKQEDLPFTTPIMAYPLPPKMKKPDMKPYDGSTDPIDHIDLYEGLMELNAAGDEMKCRA------------------------------KLAQ-
        D  +  G   + PFT+ ++  P+PPK K P +KPYDG+ DP D+++++EGLM+  AA D +KCRA                               LAQ 
Subjt:  DAEVEQGKQEDLPFTTPIMAYPLPPKMKKPDMKPYDGSTDPIDHIDLYEGLMELNAAGDEMKCRA------------------------------KLAQ-

Query:  ---HDRKMPDTHLLTIYQSEDESLRDFVERFMAEKIKVLDCSDDAARMTFTSAI
           H  K   THL TI Q E E+LR++V RF  E++KV  CSDD+A   F + +
Subjt:  ---HDRKMPDTHLLTIYQSEDESLRDFVERFMAEKIKVLDCSDDAARMTFTSAI

A0A6J1DW30 Ribonuclease H6.1e-2362.77Show/hide
Query:  GDTNALGPSVKVWEVNVQKHTAESLIPKDPARGKAPTVSGEEDALPRVSVHEQLNLKTRRTATMDPMEGLRVHITTEARCLCQTSNERNTPQQA
        GD +A GPS+++ E +V +HTAESL+P+DPA GKAPT+S EED  P+V V E LNL+ R+TAT+DP EGLRVHITTEA  L Q   ERN  QQA
Subjt:  GDTNALGPSVKVWEVNVQKHTAESLIPKDPARGKAPTVSGEEDALPRVSVHEQLNLKTRRTATMDPMEGLRVHITTEARCLCQTSNERNTPQQA

A0A6J1DXW4 uncharacterized protein LOC1110255851.8e-1941.98Show/hide
Query:  HDAEVEQGKQEDLPFTTPIMAYPLPPKMKKPDMKPYDGSTDPIDHIDLYEGLMELNAAGDEMKCRA-KLA---------QHDRKMPDTHLLTIYQSEDES
        +++    G+  + PFT+ ++  P+PPK K P MKPYDGS DP D+++++E LM+  AA D +KCRA ++A         +  RK+  THL TI Q E E+
Subjt:  HDAEVEQGKQEDLPFTTPIMAYPLPPKMKKPDMKPYDGSTDPIDHIDLYEGLMELNAAGDEMKCRA-KLA---------QHDRKMPDTHLLTIYQSEDES

Query:  LRDFVERFMAEKIKVLDCSDDAARMTFTSAI
        LR++V RF  E++KV  CSDD+A   F + +
Subjt:  LRDFVERFMAEKIKVLDCSDDAARMTFTSAI

A0A6J1DY58 uncharacterized protein LOC1110256632.0e-1837.66Show/hide
Query:  DAEVEQGKQEDLPFTTPIMAYPLPPKMKKPDMKPYDGSTDPIDHIDLYEGLMELNAAGDEMKCRA-KLAQHD------RKMP------------------
        +   + G   + PFT+ I+  P+PPK K P MKPYDGS DP D+++++EGLM+  AA D +KCRA ++A  D      R++P                  
Subjt:  DAEVEQGKQEDLPFTTPIMAYPLPPKMKKPDMKPYDGSTDPIDHIDLYEGLMELNAAGDEMKCRA-KLAQHD------RKMP------------------

Query:  ---------DTHLLTIYQSEDESLRDFVERFMAEKIKVLDCSDDAARMTFTSAI
                  THL TI Q E E+LR++V RF+ E++KV  CSDD+A   F + +
Subjt:  ---------DTHLLTIYQSEDESLRDFVERFMAEKIKVLDCSDDAARMTFTSAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCAGGAGTTGATGGGGCTGCGTGCAGAGCTCAACGAGGTTCGATCTGAGTTAGGCGGAGTTGCTCAGTTAAGGGCAGAGATTGCCAATTTGACTACAGCTCTACG
CCGCAGCCAAATTCCGAAGGCAATAGTAGGAGACACGAATGCACTAGGGCCATCAGTCAAGGTCTGGGAAGTTAATGTGCAAAAGCATACTGCTGAGTCTTTGATTCCAA
AGGACCCAGCGCGCGGAAAAGCCCCGACGGTGTCAGGGGAGGAAGATGCACTCCCACGTGTGTCGGTCCATGAGCAATTAAATTTAAAGACAAGGCGAACTGCAACAATG
GACCCAATGGAAGGATTGCGGGTGCATATTACAACGGAGGCCCGATGCCTCTGCCAGACGTCGAATGAGCGTAATACACCTCAACAAGCGGCCACCAGCCGCGGTGACCG
CCACTACTTCAACATATCAGGCCACGATGCGGAGGTAGAGCAGGGTAAACAGGAGGATCTTCCTTTCACGACTCCCATAATGGCATATCCACTCCCACCAAAGATGAAGA
AACCCGACATGAAACCGTACGATGGATCAACCGACCCGATTGATCACATCGACTTGTACGAAGGCTTGATGGAGTTAAATGCTGCAGGAGACGAAATGAAATGCAGGGCC
AAGCTAGCGCAGCATGACAGAAAAATGCCCGACACACATCTCCTCACCATTTATCAATCGGAGGACGAGTCACTGCGTGACTTTGTTGAAAGGTTTATGGCAGAGAAAAT
TAAAGTCCTAGACTGCTCGGATGATGCAGCCAGGATGACTTTCACTTCGGCAATAAATAATCCTGACCCGGTGCATTCTTTGCCATCCAACCAGCTCGGACTTATGCCGA
AGCGATCCAGCGAGGACGCCAGTATATGCATGCTGATGATGTACTCCGGGCAAAACATCTCCAACATCAAACCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCAGGAGTTGATGGGGCTGCGTGCAGAGCTCAACGAGGTTCGATCTGAGTTAGGCGGAGTTGCTCAGTTAAGGGCAGAGATTGCCAATTTGACTACAGCTCTACG
CCGCAGCCAAATTCCGAAGGCAATAGTAGGAGACACGAATGCACTAGGGCCATCAGTCAAGGTCTGGGAAGTTAATGTGCAAAAGCATACTGCTGAGTCTTTGATTCCAA
AGGACCCAGCGCGCGGAAAAGCCCCGACGGTGTCAGGGGAGGAAGATGCACTCCCACGTGTGTCGGTCCATGAGCAATTAAATTTAAAGACAAGGCGAACTGCAACAATG
GACCCAATGGAAGGATTGCGGGTGCATATTACAACGGAGGCCCGATGCCTCTGCCAGACGTCGAATGAGCGTAATACACCTCAACAAGCGGCCACCAGCCGCGGTGACCG
CCACTACTTCAACATATCAGGCCACGATGCGGAGGTAGAGCAGGGTAAACAGGAGGATCTTCCTTTCACGACTCCCATAATGGCATATCCACTCCCACCAAAGATGAAGA
AACCCGACATGAAACCGTACGATGGATCAACCGACCCGATTGATCACATCGACTTGTACGAAGGCTTGATGGAGTTAAATGCTGCAGGAGACGAAATGAAATGCAGGGCC
AAGCTAGCGCAGCATGACAGAAAAATGCCCGACACACATCTCCTCACCATTTATCAATCGGAGGACGAGTCACTGCGTGACTTTGTTGAAAGGTTTATGGCAGAGAAAAT
TAAAGTCCTAGACTGCTCGGATGATGCAGCCAGGATGACTTTCACTTCGGCAATAAATAATCCTGACCCGGTGCATTCTTTGCCATCCAACCAGCTCGGACTTATGCCGA
AGCGATCCAGCGAGGACGCCAGTATATGCATGCTGATGATGTACTCCGGGCAAAACATCTCCAACATCAAACCGTAA
Protein sequenceShow/hide protein sequence
MGQELMGLRAELNEVRSELGGVAQLRAEIANLTTALRRSQIPKAIVGDTNALGPSVKVWEVNVQKHTAESLIPKDPARGKAPTVSGEEDALPRVSVHEQLNLKTRRTATM
DPMEGLRVHITTEARCLCQTSNERNTPQQAATSRGDRHYFNISGHDAEVEQGKQEDLPFTTPIMAYPLPPKMKKPDMKPYDGSTDPIDHIDLYEGLMELNAAGDEMKCRA
KLAQHDRKMPDTHLLTIYQSEDESLRDFVERFMAEKIKVLDCSDDAARMTFTSAINNPDPVHSLPSNQLGLMPKRSSEDASICMLMMYSGQNISNIKP