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Moc04g14310 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g14310
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr4:10951090..10953588
RNA-Seq ExpressionMoc04g14310
SyntenyMoc04g14310
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145831.1 uncharacterized protein LOC111015193 [Momordica charantia]1.4e-3057.63Show/hide
Query:  SQHSVFSMFCIKTKTIGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLR
        SQ    SM      TIGQF    +EDP+SH+KSFI++AN F+LPG S DALRLK+FPFSL   A  WLNA  P+S N W  + +KFL KY   T+NAD+R
Subjt:  SQHSVFSMFCIKTKTIGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLR

Query:  EDIVSFRQKENEAVQEAW
        E+I+SFRQ++NEAV EAW
Subjt:  EDIVSFRQKENEAVQEAW

XP_022153526.1 uncharacterized protein LOC111021009 [Momordica charantia]1.5e-3264.42Show/hide
Query:  TIGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLREDIVSFRQKENEAV
        TIGQF GL +EDP+SH+KSF ++AN+F+LPG S DALRLK+FPFSL   A  WLNA  P+SIN+W  + +KFLAKY   T+NAD+RE+I+SFRQ+ENE V
Subjt:  TIGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLREDIVSFRQKENEAV

Query:  QEAW
         EAW
Subjt:  QEAW

XP_022158836.1 uncharacterized protein LOC111025302 [Momordica charantia]3.0e-4991.43Show/hide
Query:  KTIGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLREDIVSFRQKENEA
        +T+GQFGGLTNEDPYSH+KSFIEIANAFQLPG S+DALRLKMFPFSL+DGARTW+NALEPNSINTWAELT+KFLAKYHTLT+NADLREDIVSFRQKENEA
Subjt:  KTIGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLREDIVSFRQKENEA

Query:  VQEAW
        VQEAW
Subjt:  VQEAW

XP_022159127.1 uncharacterized protein LOC111025557 [Momordica charantia]1.6e-4282.52Show/hide
Query:  IGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLREDIVSFRQKENEAVQ
        + QFGG TNEDPYSH+KSFI+IANAFQLPG S+DALRLKMFPFSL+DGA TW+N LE N I TWAELT+KFLAKYHTLTRNADL+EDIVSFRQ+E+EAVQ
Subjt:  IGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLREDIVSFRQKENEAVQ

Query:  EAW
        EAW
Subjt:  EAW

XP_022159235.1 uncharacterized protein LOC111025653 [Momordica charantia]1.4e-3063.11Show/hide
Query:  IGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLREDIVSFRQKENEAVQ
        IGQFGGL +EDP SH+KSFI++AN F+LPG S DALRL +FPFS+   A  WLNA   ++I TW+++ +KFL KY   TRNAD+RE+I+SFRQKENEAV 
Subjt:  IGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLREDIVSFRQKENEAVQ

Query:  EAW
         AW
Subjt:  EAW

TrEMBL top hitse value%identityAlignment
A0A6J1CXK1 uncharacterized protein LOC1110151936.8e-3157.63Show/hide
Query:  SQHSVFSMFCIKTKTIGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLR
        SQ    SM      TIGQF    +EDP+SH+KSFI++AN F+LPG S DALRLK+FPFSL   A  WLNA  P+S N W  + +KFL KY   T+NAD+R
Subjt:  SQHSVFSMFCIKTKTIGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLR

Query:  EDIVSFRQKENEAVQEAW
        E+I+SFRQ++NEAV EAW
Subjt:  EDIVSFRQKENEAVQEAW

A0A6J1DKX0 uncharacterized protein LOC1110210097.3e-3364.42Show/hide
Query:  TIGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLREDIVSFRQKENEAV
        TIGQF GL +EDP+SH+KSF ++AN+F+LPG S DALRLK+FPFSL   A  WLNA  P+SIN+W  + +KFLAKY   T+NAD+RE+I+SFRQ+ENE V
Subjt:  TIGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLREDIVSFRQKENEAV

Query:  QEAW
         EAW
Subjt:  QEAW

A0A6J1DY39 uncharacterized protein LOC1110256536.8e-3163.11Show/hide
Query:  IGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLREDIVSFRQKENEAVQ
        IGQFGGL +EDP SH+KSFI++AN F+LPG S DALRL +FPFS+   A  WLNA   ++I TW+++ +KFL KY   TRNAD+RE+I+SFRQKENEAV 
Subjt:  IGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLREDIVSFRQKENEAVQ

Query:  EAW
         AW
Subjt:  EAW

A0A6J1DYY9 uncharacterized protein LOC1110255575.9e-4383.5Show/hide
Query:  IGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLREDIVSFRQKENEAVQ
        + QFGG TNEDPYSH+KSFI+IANAFQLPG S+DALRLKMFPFSL+DGA TWLN LE N I TWAELT+KFLAKYHTLTRNADL+EDIVSFRQ+E+EAVQ
Subjt:  IGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLREDIVSFRQKENEAVQ

Query:  EAW
        EAW
Subjt:  EAW

A0A6J1E251 uncharacterized protein LOC1110253021.5e-4991.43Show/hide
Query:  KTIGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLREDIVSFRQKENEA
        +T+GQFGGLTNEDPYSH+KSFIEIANAFQLPG S+DALRLKMFPFSL+DGARTW+NALEPNSINTWAELT+KFLAKYHTLT+NADLREDIVSFRQKENEA
Subjt:  KTIGQFGGLTNEDPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLREDIVSFRQKENEA

Query:  VQEAW
        VQEAW
Subjt:  VQEAW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGATCCATCCAGCAACTAAGTAAGACCTCAAATGAATTGTATTCCTCTTGTTCGAAAGATGGCGAGCTTAGAACCTCAACCGGTACTGTGCGGGCTAGATTAGT
CTCATATGCTGCCGCCAATTTTGCCAGAGCATCCGCATTGGAATTCTCAGACCTGGTTACCCTAGCCTCTGCAGCAACCAAAAGCGGTAGTGAAAGAGTAGAACTCGAAT
CCCAAGAAAAGTCAGGAATTGCGCCTAGTGCATTTTCCCAACATAGTGTGTTTTCCATGTTTTGCATCAAAACTAAGACGATAGGCCAGTTTGGAGGATTGACTAATGAA
GATCCTTACTCTCATATCAAATCCTTTATTGAAATAGCTAATGCATTTCAACTTCCTGGTTTCTCTAAGGATGCACTAAGATTAAAAATGTTTCCTTTTTCTCTCAAGGA
TGGTGCAAGGACTTGGCTAAACGCGTTAGAACCAAATTCTATCAACACATGGGCGGAACTGACGGAGAAATTTTTGGCAAAGTACCACACTTTGACCAGGAACGCAGACC
TTCGAGAGGACATCGTGTCTTTTAGACAGAAGGAGAACGAAGCAGTTCAAGAAGCTTGGAGTGTTTTAAGGAATTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGATCCATCCAGCAACTAAGTAAGACCTCAAATGAATTGTATTCCTCTTGTTCGAAAGATGGCGAGCTTAGAACCTCAACCGGTACTGTGCGGGCTAGATTAGT
CTCATATGCTGCCGCCAATTTTGCCAGAGCATCCGCATTGGAATTCTCAGACCTGGTTACCCTAGCCTCTGCAGCAACCAAAAGCGGTAGTGAAAGAGTAGAACTCGAAT
CCCAAGAAAAGTCAGGAATTGCGCCTAGTGCATTTTCCCAACATAGTGTGTTTTCCATGTTTTGCATCAAAACTAAGACGATAGGCCAGTTTGGAGGATTGACTAATGAA
GATCCTTACTCTCATATCAAATCCTTTATTGAAATAGCTAATGCATTTCAACTTCCTGGTTTCTCTAAGGATGCACTAAGATTAAAAATGTTTCCTTTTTCTCTCAAGGA
TGGTGCAAGGACTTGGCTAAACGCGTTAGAACCAAATTCTATCAACACATGGGCGGAACTGACGGAGAAATTTTTGGCAAAGTACCACACTTTGACCAGGAACGCAGACC
TTCGAGAGGACATCGTGTCTTTTAGACAGAAGGAGAACGAAGCAGTTCAAGAAGCTTGGAGTGTTTTAAGGAATTACTGA
Protein sequenceShow/hide protein sequence
MIGSIQQLSKTSNELYSSCSKDGELRTSTGTVRARLVSYAAANFARASALEFSDLVTLASAATKSGSERVELESQEKSGIAPSAFSQHSVFSMFCIKTKTIGQFGGLTNE
DPYSHIKSFIEIANAFQLPGFSKDALRLKMFPFSLKDGARTWLNALEPNSINTWAELTEKFLAKYHTLTRNADLREDIVSFRQKENEAVQEAWSVLRNY