; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g14500 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g14500
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:11075975..11077094
RNA-Seq ExpressionMoc04g14500
SyntenyMoc04g14500
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG51459.1 hypothetical protein EZV62_023983 [Acer yangbiense]1.6e-2441.1Show/hide
Query:  LDLSLAGKLLSKQPISSTIIKNTLVTSWKLDHSFAVETIGRNTFLVHFKRSSDRNRILQTGPWLFDKSLIILESPSSLV--KPSYLPFNKGSSLCVRISL
        +DL L GK+LS + ++    KN +   W    S  +E++G N F+ HF    +RNRI Q GPW FDKSLI+LE P   V   P+      G  + V++ +
Subjt:  LDLSLAGKLLSKQPISSTIIKNTLVTSWKLDHSFAVETIGRNTFLVHFKRSSDRNRILQTGPWLFDKSLIILESPSSLV--KPSYLPFNKGSSLCVRISL

Query:  DISKPLRRGIKLNIDGPMGGCWIPIQYERLPDFCYNCGKLDHVIKN
        DISKPL+R ++L +D       + ++YERLP FCY CG++ H  KN
Subjt:  DISKPLRRGIKLNIDGPMGGCWIPIQYERLPDFCYNCGKLDHVIKN

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]5.8e-5451.79Show/hide
Query:  MASEDLLDKWESFKLTSEEEETSVDIDILAIEGTGKRLDLSLAGKLLSKQPISSTIIKNTLVTSWKLD-HSFAVETIGRNTFLVHFKRSSDRNRILQTGP
        MA+ +LL++W++FKLTSEE++ +VDID  A+EGTGK L+LSL  KLLSK+ IS T++KNTL  +WKLD  +F+V+ IG N FL +F RSSDRNRIL+ GP
Subjt:  MASEDLLDKWESFKLTSEEEETSVDIDILAIEGTGKRLDLSLAGKLLSKQPISSTIIKNTLVTSWKLD-HSFAVETIGRNTFLVHFKRSSDRNRILQTGP

Query:  WLFDKSLIILESPSSLVKPSYLPF-----------------NK-------------------------GSSLCVRISLDISKPLRRGIKLNIDGPMGGCW
        W FD++LII+++P SL KP  + F                 NK                         GS L VR+  D+ KPL RGIKLN+DGPMGGCW
Subjt:  WLFDKSLIILESPSSLVKPSYLPF-----------------NK-------------------------GSSLCVRISLDISKPLRRGIKLNIDGPMGGCW

Query:  IPIQYERLPDFCYNCGKLDHVIKN
        IPIQYERLPDF Y+CG+LDH++K+
Subjt:  IPIQYERLPDFCYNCGKLDHVIKN

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.5e-2533.64Show/hide
Query:  EDLLDKWESFKLTSEEEETSVDIDILAIEGTGKRLDLSLAGKLLSKQPISSTIIKNTLVTSWKLDHSFAVETIGRNTFLVHFKRSSDRNRILQTGPWLFD
        +++ D WE FK T++E ET V ID      T   + L +  KL + + IS+  I++ + + W++ +S   E +G N +++ FK  S+++R+L +GPW F+
Subjt:  EDLLDKWESFKLTSEEEETSVDIDILAIEGTGKRLDLSLAGKLLSKQPISSTIIKNTLVTSWKLDHSFAVETIGRNTFLVHFKRSSDRNRILQTGPWLFD

Query:  KSLIILESPSSLVKPSYLPFN------------------------------------------KGSSLCVRISLDISKPLRRGIKL-NIDGPMGGCWIPI
        KSL++L SP++  +P  + FN                                           G  + VR+ +D+SKPLRRGIKL N DG     W P+
Subjt:  KSLIILESPSSLVKPSYLPFN------------------------------------------KGSSLCVRISLDISKPLRRGIKL-NIDGPMGGCWIPI

Query:  QYERLPDFCYNCGKLDH
        +YE+LPDFCY CGK+ H
Subjt:  QYERLPDFCYNCGKLDH

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]2.8e-4844.3Show/hide
Query:  MASEDLLDKWESFKLTSEEEETSVDIDILAIEGTGKRLDLSLAGKLLSKQPISSTIIKNTLVTSWKLDHSFAVETIGRNTFLVHFKRSSDRNRILQTGPW
        M  E+LL  W+ FKLTSEE+E ++D+D+ A++   + L  SL GKLL+K+ IS+ ++   L+ +WK++H   VE+IG+N FL HF R  D NR+++TGPW
Subjt:  MASEDLLDKWESFKLTSEEEETSVDIDILAIEGTGKRLDLSLAGKLLSKQPISSTIIKNTLVTSWKLDHSFAVETIGRNTFLVHFKRSSDRNRILQTGPW

Query:  LFDKSLIILESPSSLVKPSYLPFNK------------------------------------------GSSLCVRISLDISKPLRRGIKLNIDGPMGGCWI
         FDK+LI+L+ P S    S L FN+                                          G+SL +R+ +DI+KPLRRGIK+NIDGPMGGCWI
Subjt:  LFDKSLIILESPSSLVKPSYLPFNK------------------------------------------GSSLCVRISLDISKPLRRGIKLNIDGPMGGCWI

Query:  PIQYERLPDFCYNCGKLDHVIKNYDSIY
        PIQYERLPDFCY CG + H   + D+ Y
Subjt:  PIQYERLPDFCYNCGKLDHVIKNYDSIY

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.1e-4847.22Show/hide
Query:  MASEDLLDKWESFKLTSEEEETSVDIDILAIEGTGKRLDLSLAGKLLSKQPISSTIIKNTLVTSWKLD-HSFAVETIGRNTFLVHFKRSSDRNRILQTGP
        MA+ DLL++W++FKLTSEEEET++D+D  A   TG RL+  L GKL  K+PI+  ++KNT+ T+WKL+ ++F V+++G N FL  F R+ DRN+I ++GP
Subjt:  MASEDLLDKWESFKLTSEEEETSVDIDILAIEGTGKRLDLSLAGKLLSKQPISSTIIKNTLVTSWKLD-HSFAVETIGRNTFLVHFKRSSDRNRILQTGP

Query:  WLFDKSLIILESPSSLVKPSYLPFNK------------------------------------------GSSLCVRISLDISKPLRRGIKLNIDGPMGGCW
        W FD++L+++  P +L+ PS L F K                                          GS+L VR+ LDISKPLRRGIKLN+DGP+GG W
Subjt:  WLFDKSLIILESPSSLVKPSYLPFNK------------------------------------------GSSLCVRISLDISKPLRRGIKLNIDGPMGGCW

Query:  IPIQYERLPDFCYNCG
        IPIQYERLPDFCY+CG
Subjt:  IPIQYERLPDFCYNCG

TrEMBL top hitse value%identityAlignment
A0A5C7H421 CCHC-type domain-containing protein7.9e-2541.1Show/hide
Query:  LDLSLAGKLLSKQPISSTIIKNTLVTSWKLDHSFAVETIGRNTFLVHFKRSSDRNRILQTGPWLFDKSLIILESPSSLV--KPSYLPFNKGSSLCVRISL
        +DL L GK+LS + ++    KN +   W    S  +E++G N F+ HF    +RNRI Q GPW FDKSLI+LE P   V   P+      G  + V++ +
Subjt:  LDLSLAGKLLSKQPISSTIIKNTLVTSWKLDHSFAVETIGRNTFLVHFKRSSDRNRILQTGPWLFDKSLIILESPSSLV--KPSYLPFNKGSSLCVRISL

Query:  DISKPLRRGIKLNIDGPMGGCWIPIQYERLPDFCYNCGKLDHVIKN
        DISKPL+R ++L +D       + ++YERLP FCY CG++ H  KN
Subjt:  DISKPLRRGIKLNIDGPMGGCWIPIQYERLPDFCYNCGKLDHVIKN

A0A6J1BSZ1 uncharacterized protein LOC1110054812.8e-5451.79Show/hide
Query:  MASEDLLDKWESFKLTSEEEETSVDIDILAIEGTGKRLDLSLAGKLLSKQPISSTIIKNTLVTSWKLD-HSFAVETIGRNTFLVHFKRSSDRNRILQTGP
        MA+ +LL++W++FKLTSEE++ +VDID  A+EGTGK L+LSL  KLLSK+ IS T++KNTL  +WKLD  +F+V+ IG N FL +F RSSDRNRIL+ GP
Subjt:  MASEDLLDKWESFKLTSEEEETSVDIDILAIEGTGKRLDLSLAGKLLSKQPISSTIIKNTLVTSWKLD-HSFAVETIGRNTFLVHFKRSSDRNRILQTGP

Query:  WLFDKSLIILESPSSLVKPSYLPF-----------------NK-------------------------GSSLCVRISLDISKPLRRGIKLNIDGPMGGCW
        W FD++LII+++P SL KP  + F                 NK                         GS L VR+  D+ KPL RGIKLN+DGPMGGCW
Subjt:  WLFDKSLIILESPSSLVKPSYLPF-----------------NK-------------------------GSSLCVRISLDISKPLRRGIKLNIDGPMGGCW

Query:  IPIQYERLPDFCYNCGKLDHVIKN
        IPIQYERLPDF Y+CG+LDH++K+
Subjt:  IPIQYERLPDFCYNCGKLDHVIKN

A0A6J1D765 uncharacterized protein LOC1110179027.2e-2633.64Show/hide
Query:  EDLLDKWESFKLTSEEEETSVDIDILAIEGTGKRLDLSLAGKLLSKQPISSTIIKNTLVTSWKLDHSFAVETIGRNTFLVHFKRSSDRNRILQTGPWLFD
        +++ D WE FK T++E ET V ID      T   + L +  KL + + IS+  I++ + + W++ +S   E +G N +++ FK  S+++R+L +GPW F+
Subjt:  EDLLDKWESFKLTSEEEETSVDIDILAIEGTGKRLDLSLAGKLLSKQPISSTIIKNTLVTSWKLDHSFAVETIGRNTFLVHFKRSSDRNRILQTGPWLFD

Query:  KSLIILESPSSLVKPSYLPFN------------------------------------------KGSSLCVRISLDISKPLRRGIKL-NIDGPMGGCWIPI
        KSL++L SP++  +P  + FN                                           G  + VR+ +D+SKPLRRGIKL N DG     W P+
Subjt:  KSLIILESPSSLVKPSYLPFN------------------------------------------KGSSLCVRISLDISKPLRRGIKL-NIDGPMGGCWIPI

Query:  QYERLPDFCYNCGKLDH
        +YE+LPDFCY CGK+ H
Subjt:  QYERLPDFCYNCGKLDH

A0A6J1DU55 uncharacterized protein LOC1110231351.3e-4844.3Show/hide
Query:  MASEDLLDKWESFKLTSEEEETSVDIDILAIEGTGKRLDLSLAGKLLSKQPISSTIIKNTLVTSWKLDHSFAVETIGRNTFLVHFKRSSDRNRILQTGPW
        M  E+LL  W+ FKLTSEE+E ++D+D+ A++   + L  SL GKLL+K+ IS+ ++   L+ +WK++H   VE+IG+N FL HF R  D NR+++TGPW
Subjt:  MASEDLLDKWESFKLTSEEEETSVDIDILAIEGTGKRLDLSLAGKLLSKQPISSTIIKNTLVTSWKLDHSFAVETIGRNTFLVHFKRSSDRNRILQTGPW

Query:  LFDKSLIILESPSSLVKPSYLPFNK------------------------------------------GSSLCVRISLDISKPLRRGIKLNIDGPMGGCWI
         FDK+LI+L+ P S    S L FN+                                          G+SL +R+ +DI+KPLRRGIK+NIDGPMGGCWI
Subjt:  LFDKSLIILESPSSLVKPSYLPFNK------------------------------------------GSSLCVRISLDISKPLRRGIKLNIDGPMGGCWI

Query:  PIQYERLPDFCYNCGKLDHVIKNYDSIY
        PIQYERLPDFCY CG + H   + D+ Y
Subjt:  PIQYERLPDFCYNCGKLDHVIKNYDSIY

A0A6J1DX30 uncharacterized protein LOC1110248741.0e-4847.22Show/hide
Query:  MASEDLLDKWESFKLTSEEEETSVDIDILAIEGTGKRLDLSLAGKLLSKQPISSTIIKNTLVTSWKLD-HSFAVETIGRNTFLVHFKRSSDRNRILQTGP
        MA+ DLL++W++FKLTSEEEET++D+D  A   TG RL+  L GKL  K+PI+  ++KNT+ T+WKL+ ++F V+++G N FL  F R+ DRN+I ++GP
Subjt:  MASEDLLDKWESFKLTSEEEETSVDIDILAIEGTGKRLDLSLAGKLLSKQPISSTIIKNTLVTSWKLD-HSFAVETIGRNTFLVHFKRSSDRNRILQTGP

Query:  WLFDKSLIILESPSSLVKPSYLPFNK------------------------------------------GSSLCVRISLDISKPLRRGIKLNIDGPMGGCW
        W FD++L+++  P +L+ PS L F K                                          GS+L VR+ LDISKPLRRGIKLN+DGP+GG W
Subjt:  WLFDKSLIILESPSSLVKPSYLPFNK------------------------------------------GSSLCVRISLDISKPLRRGIKLNIDGPMGGCW

Query:  IPIQYERLPDFCYNCG
        IPIQYERLPDFCY+CG
Subjt:  IPIQYERLPDFCYNCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCAGAGGACTTGTTGGATAAATGGGAAAGTTTCAAGTTGACATCCGAGGAGGAGGAAACTTCAGTGGACATTGACATCTTGGCAATTGAAGGTACCGGGAAGAG
GCTTGATCTAAGCCTCGCTGGGAAGCTTCTCTCTAAGCAACCCATTTCATCCACCATTATCAAGAACACTTTGGTGACTTCTTGGAAGCTAGATCATTCTTTTGCGGTGG
AAACCATAGGAAGGAATACTTTTCTTGTCCATTTCAAAAGATCCTCTGATCGGAACCGAATTCTCCAAACGGGACCATGGTTGTTTGATAAGTCTTTAATCATATTGGAA
TCCCCTTCCTCCCTTGTTAAGCCCTCATATTTACCCTTCAATAAGGGGTCTAGTCTCTGTGTTCGTATTTCTCTTGATATCTCAAAGCCTCTACGACGTGGTATCAAACT
GAACATAGATGGCCCCATGGGTGGCTGCTGGATTCCAATTCAATATGAACGGCTTCCGGACTTCTGCTATAATTGTGGGAAACTTGATCATGTTATCAAGAATTATGACT
CCATTTATTATGGCAAGGAAATGATCCACCCATATAAGGCCCCTATGGATCTTGGTTGCGGTTCCAAGGGAACTTCAAATCCTTCTCCTCCTTTCAGCAGCCAAACTTGG
ATCGTCGGAGGTCTCTCCCCAGAATTCCCCAGCCTCCCAGAACTCACAGTCTCCCTAACATCCTTACACTATACAATCAAGCCGGATTTTGCGCCCACTCTGCCATTTCA
AAAAGAAACTGACAGTGATACTCAATCACCGCTGGGGCCCAGTCCTAAATCAGAGGCTCCAGGAATTGAGGCAGGTGTTACAGCTACTATTCCTCCCAGCTGTGCAAATG
TCCGCAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATCAGAGGACTTGTTGGATAAATGGGAAAGTTTCAAGTTGACATCCGAGGAGGAGGAAACTTCAGTGGACATTGACATCTTGGCAATTGAAGGTACCGGGAAGAG
GCTTGATCTAAGCCTCGCTGGGAAGCTTCTCTCTAAGCAACCCATTTCATCCACCATTATCAAGAACACTTTGGTGACTTCTTGGAAGCTAGATCATTCTTTTGCGGTGG
AAACCATAGGAAGGAATACTTTTCTTGTCCATTTCAAAAGATCCTCTGATCGGAACCGAATTCTCCAAACGGGACCATGGTTGTTTGATAAGTCTTTAATCATATTGGAA
TCCCCTTCCTCCCTTGTTAAGCCCTCATATTTACCCTTCAATAAGGGGTCTAGTCTCTGTGTTCGTATTTCTCTTGATATCTCAAAGCCTCTACGACGTGGTATCAAACT
GAACATAGATGGCCCCATGGGTGGCTGCTGGATTCCAATTCAATATGAACGGCTTCCGGACTTCTGCTATAATTGTGGGAAACTTGATCATGTTATCAAGAATTATGACT
CCATTTATTATGGCAAGGAAATGATCCACCCATATAAGGCCCCTATGGATCTTGGTTGCGGTTCCAAGGGAACTTCAAATCCTTCTCCTCCTTTCAGCAGCCAAACTTGG
ATCGTCGGAGGTCTCTCCCCAGAATTCCCCAGCCTCCCAGAACTCACAGTCTCCCTAACATCCTTACACTATACAATCAAGCCGGATTTTGCGCCCACTCTGCCATTTCA
AAAAGAAACTGACAGTGATACTCAATCACCGCTGGGGCCCAGTCCTAAATCAGAGGCTCCAGGAATTGAGGCAGGTGTTACAGCTACTATTCCTCCCAGCTGTGCAAATG
TCCGCAATTAG
Protein sequenceShow/hide protein sequence
MASEDLLDKWESFKLTSEEEETSVDIDILAIEGTGKRLDLSLAGKLLSKQPISSTIIKNTLVTSWKLDHSFAVETIGRNTFLVHFKRSSDRNRILQTGPWLFDKSLIILE
SPSSLVKPSYLPFNKGSSLCVRISLDISKPLRRGIKLNIDGPMGGCWIPIQYERLPDFCYNCGKLDHVIKNYDSIYYGKEMIHPYKAPMDLGCGSKGTSNPSPPFSSQTW
IVGGLSPEFPSLPELTVSLTSLHYTIKPDFAPTLPFQKETDSDTQSPLGPSPKSEAPGIEAGVTATIPPSCANVRN