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Moc04g14940 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g14940
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:11387431..11387799
RNA-Seq ExpressionMoc04g14940
SyntenyMoc04g14940
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142775.1 protein NYNRIN-like [Momordica charantia]8.2e-3173.12Show/hide
Query:  MPVEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIV
        +PVEIG+PT+R++ YE  +NEEELLLN+DLL+EKRE+ QLRLTEYQNR+ RHYN+ VRPRSFQVGHLVLR++  HV TL+PSWE  FEVKGIV
Subjt:  MPVEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIV

XP_022156049.1 uncharacterized protein LOC111023017 [Momordica charantia]3.7e-3157.02Show/hide
Query:  MPVEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIVRPGTYML
        +PVEIG+PT RVE ++   N E  LLN+DLLEEKR   QL+L EYQNRMAR+YN R R R+F+ G L L+++  HV  L+P+WE P+ V  +VRP  Y+L
Subjt:  MPVEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIVRPGTYML

Query:  ADLKGRVLAHPWNAEHLKRYY
        +DL GR L HPWNAE L+ YY
Subjt:  ADLKGRVLAHPWNAEHLKRYY

XP_022156070.1 uncharacterized protein K02A2.6-like [Momordica charantia]3.1e-3872.48Show/hide
Query:  VEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIVRPGTYMLAD
        VEIG+PT+RVE YE  +NEEELLL +DL++EKRE  QLRL EYQN+MARHYN+RVR RSFQ+G+LVLR++  HV  L+PSWE PFEVKGIVRPGTYMLAD
Subjt:  VEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIVRPGTYMLAD

Query:  LKGRVLAHP
        L+G++L+HP
Subjt:  LKGRVLAHP

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]3.6e-3458.68Show/hide
Query:  MPVEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIVRPGTYML
        +P E+G+PT RVE ++   N E LL+N+DLLEEKR   QLRL EYQNRMAR+YNARV+ R+F+   LVL+++  HVG L+P+WE P+ V  I+RP  Y+L
Subjt:  MPVEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIVRPGTYML

Query:  ADLKGRVLAHPWNAEHLKRYY
        +DL GR L HPWNAEHL+ YY
Subjt:  ADLKGRVLAHPWNAEHLKRYY

XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]1.1e-4878.69Show/hide
Query:  MPVEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIVRPGTYML
        +P EIG+PTDR+EQYEP +NE ELLLN+DLLE KRE  QLRL E QNRMARHYN R++PRSFQVGHLV  +I  HVGTLDPSWE  FEVKGIVRPGTYML
Subjt:  MPVEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIVRPGTYML

Query:  ADLKGRVLAHPWNAEHLKRYYP
        ADL+  VLAHPWNAEHLKRYYP
Subjt:  ADLKGRVLAHPWNAEHLKRYYP

TrEMBL top hitse value%identityAlignment
A0A6J1CLW5 protein NYNRIN-like4.0e-3173.12Show/hide
Query:  MPVEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIV
        +PVEIG+PT+R++ YE  +NEEELLLN+DLL+EKRE+ QLRLTEYQNR+ RHYN+ VRPRSFQVGHLVLR++  HV TL+PSWE  FEVKGIV
Subjt:  MPVEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIV

A0A6J1DP99 uncharacterized protein K02A2.6-like1.5e-3872.48Show/hide
Query:  VEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIVRPGTYMLAD
        VEIG+PT+RVE YE  +NEEELLL +DL++EKRE  QLRL EYQN+MARHYN+RVR RSFQ+G+LVLR++  HV  L+PSWE PFEVKGIVRPGTYMLAD
Subjt:  VEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIVRPGTYMLAD

Query:  LKGRVLAHP
        L+G++L+HP
Subjt:  LKGRVLAHP

A0A6J1DS38 uncharacterized protein LOC1110230171.8e-3157.02Show/hide
Query:  MPVEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIVRPGTYML
        +PVEIG+PT RVE ++   N E  LLN+DLLEEKR   QL+L EYQNRMAR+YN R R R+F+ G L L+++  HV  L+P+WE P+ V  +VRP  Y+L
Subjt:  MPVEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIVRPGTYML

Query:  ADLKGRVLAHPWNAEHLKRYY
        +DL GR L HPWNAE L+ YY
Subjt:  ADLKGRVLAHPWNAEHLKRYY

A0A6J1DWM2 Ribonuclease H1.7e-3458.68Show/hide
Query:  MPVEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIVRPGTYML
        +P E+G+PT RVE ++   N E LL+N+DLLEEKR   QLRL EYQNRMAR+YNARV+ R+F+   LVL+++  HVG L+P+WE P+ V  I+RP  Y+L
Subjt:  MPVEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIVRPGTYML

Query:  ADLKGRVLAHPWNAEHLKRYY
        +DL GR L HPWNAEHL+ YY
Subjt:  ADLKGRVLAHPWNAEHLKRYY

A0A6J1DXL9 uncharacterized protein LOC1110254485.5e-4978.69Show/hide
Query:  MPVEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIVRPGTYML
        +P EIG+PTDR+EQYEP +NE ELLLN+DLLE KRE  QLRL E QNRMARHYN R++PRSFQVGHLV  +I  HVGTLDPSWE  FEVKGIVRPGTYML
Subjt:  MPVEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIVRPGTYML

Query:  ADLKGRVLAHPWNAEHLKRYYP
        ADL+  VLAHPWNAEHLKRYYP
Subjt:  ADLKGRVLAHPWNAEHLKRYYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGTTGAGATCGGCGTACCGACAGACAGGGTAGAGCAGTACGAGCCAACGAAGAACGAAGAAGAGCTACTCCTTAACATGGACTTATTGGAAGAAAAAAGGGAAAT
GCCTCAACTGCGCCTAACAGAGTATCAAAACAGAATGGCCAGACATTACAATGCCCGAGTTCGACCTCGAAGCTTCCAAGTTGGACATTTGGTCTTAAGGAGAATTGGAT
GTCATGTGGGCACCCTTGACCCAAGTTGGGAGAGACCGTTCGAGGTTAAAGGCATAGTCCGACCTGGAACGTATATGCTGGCCGACCTGAAAGGAAGAGTGCTTGCGCAT
CCATGGAACGCAGAGCACTTGAAGCGCTATTACCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGTTGAGATCGGCGTACCGACAGACAGGGTAGAGCAGTACGAGCCAACGAAGAACGAAGAAGAGCTACTCCTTAACATGGACTTATTGGAAGAAAAAAGGGAAAT
GCCTCAACTGCGCCTAACAGAGTATCAAAACAGAATGGCCAGACATTACAATGCCCGAGTTCGACCTCGAAGCTTCCAAGTTGGACATTTGGTCTTAAGGAGAATTGGAT
GTCATGTGGGCACCCTTGACCCAAGTTGGGAGAGACCGTTCGAGGTTAAAGGCATAGTCCGACCTGGAACGTATATGCTGGCCGACCTGAAAGGAAGAGTGCTTGCGCAT
CCATGGAACGCAGAGCACTTGAAGCGCTATTACCCTTGA
Protein sequenceShow/hide protein sequence
MPVEIGVPTDRVEQYEPTKNEEELLLNMDLLEEKREMPQLRLTEYQNRMARHYNARVRPRSFQVGHLVLRRIGCHVGTLDPSWERPFEVKGIVRPGTYMLADLKGRVLAH
PWNAEHLKRYYP