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Moc04g15050 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g15050
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr4:11449974..11450273
RNA-Seq ExpressionMoc04g15050
SyntenyMoc04g15050
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131660.1 uncharacterized protein LOC111004785 [Momordica charantia]4.9e-3487.06Show/hide
Query:  GMLRRFQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ
        G    F+ RGAVFMLRG+AVNWWES+AAAEDHAN PVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFT+LS+
Subjt:  GMLRRFQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ

XP_022155341.1 uncharacterized protein LOC111022474 [Momordica charantia]3.8e-3487.06Show/hide
Query:  GMLRRFQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ
        G    F+ RGA+FMLRGEAVNWWES+AAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTV QYERKFT+LS+
Subjt:  GMLRRFQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ

XP_022157413.1 uncharacterized protein LOC111024114 [Momordica charantia]2.2e-3492.5Show/hide
Query:  FQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ
        F+ RGAVFMLRGEAVNWWES+AAAEDH NVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFT+LS+
Subjt:  FQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ

XP_022158645.1 uncharacterized protein LOC111025102 [Momordica charantia]1.9e-3387.06Show/hide
Query:  GMLRRFQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ
        G    F+ RGAVFML GEAVNWWES+AAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQ+ERKFT+LS+
Subjt:  GMLRRFQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ

XP_022158750.1 uncharacterized protein LOC111025215 [Momordica charantia]4.9e-3491.25Show/hide
Query:  FQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ
        F+ RGAVFMLRGEAVNWWES+AAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKR EFLRLTQGSLTVA+YERKFT+LS+
Subjt:  FQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ

TrEMBL top hitse value%identityAlignment
A0A6J1BQB2 uncharacterized protein LOC1110047852.4e-3487.06Show/hide
Query:  GMLRRFQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ
        G    F+ RGAVFMLRG+AVNWWES+AAAEDHAN PVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFT+LS+
Subjt:  GMLRRFQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ

A0A6J1DRF5 uncharacterized protein LOC1110224741.8e-3487.06Show/hide
Query:  GMLRRFQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ
        G    F+ RGA+FMLRGEAVNWWES+AAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTV QYERKFT+LS+
Subjt:  GMLRRFQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ

A0A6J1DTA8 uncharacterized protein LOC1110241141.1e-3492.5Show/hide
Query:  FQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ
        F+ RGAVFMLRGEAVNWWES+AAAEDH NVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFT+LS+
Subjt:  FQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ

A0A6J1DWE6 uncharacterized protein LOC1110251029.1e-3487.06Show/hide
Query:  GMLRRFQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ
        G    F+ RGAVFML GEAVNWWES+AAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQ+ERKFT+LS+
Subjt:  GMLRRFQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ

A0A6J1DWP4 uncharacterized protein LOC1110252152.4e-3491.25Show/hide
Query:  FQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ
        F+ RGAVFMLRGEAVNWWES+AAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKR EFLRLTQGSLTVA+YERKFT+LS+
Subjt:  FQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCAGGGAGTTGGAAGCCCTTTATGTGTATTTGGGATGCTCCGACGATTTCAAGGTCGCGGAGCAGTGTTTATGCTTCGAGGAGAAGCAGTAAATTGGTGG
GAGTCGATGGCGGCAGCGGAGGATCACGCCAACGTACCCGTCACATGGGCAAGATTTAAGGACCTACTCTATGAGTACTATTTCCCCGTGACTGTGAGGAATGAA
AAACGGGCAGAGTTTCTCCGTCTCACTCAAGGGAGCCTAACTGTGGCCCAATACGAGAGGAAGTTCACCGACCTGTCCCAGGCTAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCAGGGAGTTGGAAGCCCTTTATGTGTATTTGGGATGCTCCGACGATTTCAAGGTCGCGGAGCAGTGTTTATGCTTCGAGGAGAAGCAGTAAATTGGTGG
GAGTCGATGGCGGCAGCGGAGGATCACGCCAACGTACCCGTCACATGGGCAAGATTTAAGGACCTACTCTATGAGTACTATTTCCCCGTGACTGTGAGGAATGAA
AAACGGGCAGAGTTTCTCCGTCTCACTCAAGGGAGCCTAACTGTGGCCCAATACGAGAGGAAGTTCACCGACCTGTCCCAGGCTAGCTGA
Protein sequenceShow/hide protein sequence
MGQGVGSPLCVFGMLRRFQGRGAVFMLRGEAVNWWESMAAAEDHANVPVTWARFKDLLYEYYFPVTVRNEKRAEFLRLTQGSLTVAQYERKFTDLSQAS