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Moc04g15450 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g15450
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:11647005..11648438
RNA-Seq ExpressionMoc04g15450
SyntenyMoc04g15450
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS34966.1 hypothetical protein Acr_00g0037010 [Actinidia rufa]8.0e-1338.71Show/hide
Query:  EFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYE--------TDLAHTVPVDALSMPSVEQEEHCS--VETNQTPY
        ++ AKD RM  YLG+ K TL+       +K ++F I Q+P+ +N   DALA LA+ +E          L  +    A  +PS+    H +  + T +TPY
Subjt:  EFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYE--------TDLAHTVPVDALSMPSVEQEEHCS--VETNQTPY

Query:  SLAFGSKAMIPVEIGSRLERTSRPFNEAENAEALNLNLDLLEEKYCNAPSPSAWY
        S+ FG++++IPVEIG    RT   FNE  N   L LNLDLL+EK   A    A Y
Subjt:  SLAFGSKAMIPVEIGSRLERTSRPFNEAENAEALNLNLDLLEEKYCNAPSPSAWY

XP_022150038.1 uncharacterized protein K02A2.6-like [Momordica charantia]3.0e-1252.33Show/hide
Query:  EEFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYETDLAHTVPVDALSMPSVEQEEHCSVET
        EE+QAKD RM KYLGK +         +LA+FR + + QVP+S NSN DALAKLA+ YETDLA +VPV+ L  PS+ + +   V+T
Subjt:  EEFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYETDLAHTVPVDALSMPSVEQEEHCSVET

XP_022150100.1 uncharacterized protein LOC111018362 [Momordica charantia]5.2e-1251.16Show/hide
Query:  EEFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYETDLAHTVPVDALSMPSVEQEEHCSVET
        EE+Q KD RM KYL K +         +LA+FR + + QVP+SENSN DALAKLA+ YETDLA +VPV+ L  PS+ + +   V+T
Subjt:  EEFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYETDLAHTVPVDALSMPSVEQEEHCSVET

XP_022153142.1 uncharacterized protein LOC111020710 [Momordica charantia]1.2e-1151.16Show/hide
Query:  EEFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYETDLAHTVPVDALSMPSVEQEEHCSVET
        EE+QAKD RM KYL K +         +LA+F  + + QVP+SENSN DALAKLA+ YETDLA +VPV+ L  PS+ + +   V+T
Subjt:  EEFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYETDLAHTVPVDALSMPSVEQEEHCSVET

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]8.8e-1250Show/hide
Query:  EEFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYETDLAHTVPVDALSMPSVEQEEHCSVETNQ
        EE+Q K+ RM +YL KA+          LA+F D+VIRQVP+SENSN D LA+LA+ Y+TDL  TVPV+ L+  SV+Q E   + + Q
Subjt:  EEFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYETDLAHTVPVDALSMPSVEQEEHCSVETNQ

TrEMBL top hitse value%identityAlignment
A0A6J1D7J6 Ribonuclease H2.5e-1251.16Show/hide
Query:  EEFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYETDLAHTVPVDALSMPSVEQEEHCSVET
        EE+Q KD RM KYL K +         +LA+FR + + QVP+SENSN DALAKLA+ YETDLA +VPV+ L  PS+ + +   V+T
Subjt:  EEFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYETDLAHTVPVDALSMPSVEQEEHCSVET

A0A6J1D8D8 Ribonuclease H1.5e-1252.33Show/hide
Query:  EEFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYETDLAHTVPVDALSMPSVEQEEHCSVET
        EE+QAKD RM KYLGK +         +LA+FR + + QVP+S NSN DALAKLA+ YETDLA +VPV+ L  PS+ + +   V+T
Subjt:  EEFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYETDLAHTVPVDALSMPSVEQEEHCSVET

A0A6J1DI47 Ribonuclease H5.6e-1251.16Show/hide
Query:  EEFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYETDLAHTVPVDALSMPSVEQEEHCSVET
        EE+QAKD RM KYL K +         +LA+F  + + QVP+SENSN DALAKLA+ YETDLA +VPV+ L  PS+ + +   V+T
Subjt:  EEFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYETDLAHTVPVDALSMPSVEQEEHCSVET

A0A6J1DWM2 Ribonuclease H4.3e-1250Show/hide
Query:  EEFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYETDLAHTVPVDALSMPSVEQEEHCSVETNQ
        EE+Q K+ RM +YL KA+          LA+F D+VIRQVP+SENSN D LA+LA+ Y+TDL  TVPV+ L+  SV+Q E   + + Q
Subjt:  EEFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYETDLAHTVPVDALSMPSVEQEEHCSVETNQ

A0A7J0DGR0 RNase H domain-containing protein3.9e-1338.71Show/hide
Query:  EFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYE--------TDLAHTVPVDALSMPSVEQEEHCS--VETNQTPY
        ++ AKD RM  YLG+ K TL+       +K ++F I Q+P+ +N   DALA LA+ +E          L  +    A  +PS+    H +  + T +TPY
Subjt:  EFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYE--------TDLAHTVPVDALSMPSVEQEEHCS--VETNQTPY

Query:  SLAFGSKAMIPVEIGSRLERTSRPFNEAENAEALNLNLDLLEEKYCNAPSPSAWY
        S+ FG++++IPVEIG    RT   FNE  N   L LNLDLL+EK   A    A Y
Subjt:  SLAFGSKAMIPVEIGSRLERTSRPFNEAENAEALNLNLDLLEEKYCNAPSPSAWY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGTTCCAAGCAAAAGATGGAAGGATGGCCAAATACTTAGGAAAAGCGAAAGAAACTTTGGCTAAGTTCAGAGAAGAAAATTTGGCTAAGTTCAGAGAC
TTTGTAATTCGACAAGTTCCTAAGTCTGAGAATTCCAACACAGACGCCCTGGCAAAATTAGCGGCGGTGTACGAGACTGATCTAGCCCACACAGTACCGGTTGAT
GCTCTGAGCATGCCATCTGTTGAACAAGAAGAACACTGTTCAGTTGAGACAAATCAAACACCTTATTCGTTAGCCTTTGGCTCGAAAGCAATGATCCCAGTAGAG
ATTGGATCACGGTTAGAACGAACTAGTCGGCCTTTCAATGAGGCTGAGAACGCAGAAGCATTGAATTTGAATCTAGACCTACTTGAGGAGAAATACTGTAACGCC
CCGAGTCCCTCAGCTTGGTATGTTGGGTCTTGGGTTGAGGGAATGGACTCCTCCTTCTTTGGGTTTGGGCTTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGTTCCAAGCAAAAGATGGAAGGATGGCCAAATACTTAGGAAAAGCGAAAGAAACTTTGGCTAAGTTCAGAGAAGAAAATTTGGCTAAGTTCAGAGAC
TTTGTAATTCGACAAGTTCCTAAGTCTGAGAATTCCAACACAGACGCCCTGGCAAAATTAGCGGCGGTGTACGAGACTGATCTAGCCCACACAGTACCGGTTGAT
GCTCTGAGCATGCCATCTGTTGAACAAGAAGAACACTGTTCAGTTGAGACAAATCAAACACCTTATTCGTTAGCCTTTGGCTCGAAAGCAATGATCCCAGTAGAG
ATTGGATCACGGTTAGAACGAACTAGTCGGCCTTTCAATGAGGCTGAGAACGCAGAAGCATTGAATTTGAATCTAGACCTACTTGAGGAGAAATACTGTAACGCC
CCGAGTCCCTCAGCTTGGTATGTTGGGTCTTGGGTTGAGGGAATGGACTCCTCCTTCTTTGGGTTTGGGCTTGGTTGA
Protein sequenceShow/hide protein sequence
MEEFQAKDGRMAKYLGKAKETLAKFREENLAKFRDFVIRQVPKSENSNTDALAKLAAVYETDLAHTVPVDALSMPSVEQEEHCSVETNQTPYSLAFGSKAMIPVE
IGSRLERTSRPFNEAENAEALNLNLDLLEEKYCNAPSPSAWYVGSWVEGMDSSFFGFGLG