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Moc04g15580 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g15580
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:11701021..11701245
RNA-Seq ExpressionMoc04g15580
SyntenyMoc04g15580
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ00937.1 hypothetical protein Acr_14g0005720 [Actinidia rufa]3.1e-1756.41Show/hide
Query:  MAKHYNTRVRPRAFQVGHLVLRRV-----QTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHPWNAEHLKRYY
        +AK+YN RVR R+F  G LVLR+V     + + G L PTWEGP+KV  + +PGTY L DL+G  ++HPWNAEHLK+YY
Subjt:  MAKHYNTRVRPRAFQVGHLVLRRV-----QTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHPWNAEHLKRYY

XP_022144032.1 uncharacterized protein LOC111013824 [Momordica charantia]2.8e-1872.73Show/hide
Query:  VLRRVQTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHPWNAEHLKRYYP
        V +++Q+HVG LDP+WEGPF+VKGI++ GTY+LADL+G+V+AHPWNAEHLKRYYP
Subjt:  VLRRVQTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHPWNAEHLKRYYP

XP_022156070.1 uncharacterized protein K02A2.6-like [Momordica charantia]2.6e-1968.25Show/hide
Query:  MAKHYNTRVRPRAFQVGHLVLRRVQTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHP
        MA+HYN+RVR R+FQ+G+LVLR+VQ HV  L+P+WEGPF+VKGIV+PGTY+LADL+G +++HP
Subjt:  MAKHYNTRVRPRAFQVGHLVLRRVQTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHP

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]2.4e-1754.79Show/hide
Query:  MAKHYNTRVRPRAFQVGHLVLRRVQTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHPWNAEHLKRYY
        MA++YN RV+ R F+   LVL++V  HVGAL+P WEGP++V  I++P  Y+L+DL G  + HPWNAEHL+ YY
Subjt:  MAKHYNTRVRPRAFQVGHLVLRRVQTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHPWNAEHLKRYY

XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]4.4e-2772.97Show/hide
Query:  MAKHYNTRVRPRAFQVGHLVLRRVQTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHPWNAEHLKRYYP
        MA+HYNTR++PR+FQVGHLV  ++Q+HVG LDP+WE  F+VKGIV+PGTY+LADL+  V+AHPWNAEHLKRYYP
Subjt:  MAKHYNTRVRPRAFQVGHLVLRRVQTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHPWNAEHLKRYYP

TrEMBL top hitse value%identityAlignment
A0A2N9FYD5 Ribonuclease H6.8e-1854.43Show/hide
Query:  MAKHYNTRVRPRAFQVGHLVLRRV-----QTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHPWNAEHLKRYYP
        MA+HYN+RV+PR   +G LVLR+V         G L P WEGP+KV  + +PGTY L D+ G  ++HPWNAEHL+RYYP
Subjt:  MAKHYNTRVRPRAFQVGHLVLRRV-----QTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHPWNAEHLKRYYP

A0A2N9GS26 Ribonuclease H6.8e-1854.43Show/hide
Query:  MAKHYNTRVRPRAFQVGHLVLRRV-----QTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHPWNAEHLKRYYP
        MA+HYN+RV+PR   +G LVLR+V         G L P WEGP+KV  + +PGTY L D+ G  ++HPWNAEHL+RYYP
Subjt:  MAKHYNTRVRPRAFQVGHLVLRRV-----QTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHPWNAEHLKRYYP

A0A6J1CSJ1 Ribonuclease H1.4e-1872.73Show/hide
Query:  VLRRVQTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHPWNAEHLKRYYP
        V +++Q+HVG LDP+WEGPF+VKGI++ GTY+LADL+G+V+AHPWNAEHLKRYYP
Subjt:  VLRRVQTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHPWNAEHLKRYYP

A0A6J1DP99 uncharacterized protein K02A2.6-like1.2e-1968.25Show/hide
Query:  MAKHYNTRVRPRAFQVGHLVLRRVQTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHP
        MA+HYN+RVR R+FQ+G+LVLR+VQ HV  L+P+WEGPF+VKGIV+PGTY+LADL+G +++HP
Subjt:  MAKHYNTRVRPRAFQVGHLVLRRVQTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHP

A0A6J1DXL9 uncharacterized protein LOC1110254482.1e-2772.97Show/hide
Query:  MAKHYNTRVRPRAFQVGHLVLRRVQTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHPWNAEHLKRYYP
        MA+HYNTR++PR+FQVGHLV  ++Q+HVG LDP+WE  F+VKGIV+PGTY+LADL+  V+AHPWNAEHLKRYYP
Subjt:  MAKHYNTRVRPRAFQVGHLVLRRVQTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHPWNAEHLKRYYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAACATTACAACACCCGCGTTCGACCTCGGGCCTTTCAGGTCGGACATCTGGTCTTAAGGAGGGTCCAAACCCATGTGGGTGCCCTTGATCCGACCTGGGAGGG
CCCGTTTAAGGTCAAGGGCATAGTCCAACCTGGGACGTACGTATTGGCCGATCTGAAAGGAGACGTCATCGCGCACCCGTGGAACGCGGAGCACCTGAAGCGTTATTATC
CTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAACATTACAACACCCGCGTTCGACCTCGGGCCTTTCAGGTCGGACATCTGGTCTTAAGGAGGGTCCAAACCCATGTGGGTGCCCTTGATCCGACCTGGGAGGG
CCCGTTTAAGGTCAAGGGCATAGTCCAACCTGGGACGTACGTATTGGCCGATCTGAAAGGAGACGTCATCGCGCACCCGTGGAACGCGGAGCACCTGAAGCGTTATTATC
CTTGA
Protein sequenceShow/hide protein sequence
MAKHYNTRVRPRAFQVGHLVLRRVQTHVGALDPTWEGPFKVKGIVQPGTYVLADLKGDVIAHPWNAEHLKRYYP