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Moc04g15610 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g15610
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr4:11712607..11715329
RNA-Seq ExpressionMoc04g15610
SyntenyMoc04g15610
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149799.1 uncharacterized protein LOC111018145 [Momordica charantia]2.2e-3051.68Show/hide
Query:  PQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAEEWVRELEALYAYVACNDQFK--------------------------------ARFKDLLYDYYF
        PQ    PQ+EA+FIKDFK Y   TFD  SE+ TAAEEW+RELEALY Y+ C DQFK                                 RFKDLLYDYY+
Subjt:  PQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAEEWVRELEALYAYVACNDQFK--------------------------------ARFKDLLYDYYF

Query:  SEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFALDLIPTEARKIKR
         E +KD +EA+FL L  G+++VAQY++KF E S FAL+LIPTEA KIKR
Subjt:  SEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFALDLIPTEARKIKR

XP_022156326.1 uncharacterized protein LOC111023247 [Momordica charantia]8.2e-3851.69Show/hide
Query:  MPPCRSMRTRTNVNPALEGENVADPPTPLPQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAEEWVRELEALYAYVACNDQFK---------------
        MPP  SMR R + +PA  G  V     P PQ    PQ+EA+FIKDFK Y  PTFDG SE+ TA EEW+RELEALYAY+ C DQFK               
Subjt:  MPPCRSMRTRTNVNPALEGENVADPPTPLPQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAEEWVRELEALYAYVACNDQFK---------------

Query:  -----------------ARFKDLLYDYYFSEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFALDLIPTEARKIKR
                         ARFK+LLYDYY+ E +KD +EA+FL L  G+++VAQY++KF E SRFAL+LIPTEA KIKR
Subjt:  -----------------ARFKDLLYDYYFSEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFALDLIPTEARKIKR

XP_022156330.1 uncharacterized protein LOC111023250 [Momordica charantia]1.1e-3455.03Show/hide
Query:  PQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAEEWVRELEALYAYVACNDQFK--------------------------------ARFKDLLYDYYF
        P+ F  PQ+EAQFIKDFK Y  PTFDGGS+K T AEEWVRELEALY Y+ C DQFK                                ARFKDLLYDYY+
Subjt:  PQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAEEWVRELEALYAYVACNDQFK--------------------------------ARFKDLLYDYYF

Query:  SEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFALDLIPTEARKIKR
         E +KD +EA+FL  + G++TVAQY++KF E SRFA +LIPTEA KIKR
Subjt:  SEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFALDLIPTEARKIKR

XP_022156546.1 uncharacterized protein LOC111023424 [Momordica charantia]6.3e-3846.01Show/hide
Query:  MPPCRSMRTRTNVNPALEGENVADPPTP-----------------------------------LPQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAE
        MPP RSMR R +V+PA  GENVADPP P                                    P+    PQ+EAQFIKDFK Y  PTF GGSE+ T AE
Subjt:  MPPCRSMRTRTNVNPALEGENVADPPTP-----------------------------------LPQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAE

Query:  EWVRELEALYAYVACNDQFK--------------------------------ARFKDLLYDYYFSEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFA
        EWVRELEALYAY+ C DQFK                                ARFK+LLYD+Y+ E ++D +E +FL L  G++TVAQY++KF E S FA
Subjt:  EWVRELEALYAYVACNDQFK--------------------------------ARFKDLLYDYYFSEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFA

Query:  LDLIPTEARKIKR
        L+LIPTEA KIKR
Subjt:  LDLIPTEARKIKR

XP_022158637.1 uncharacterized protein LOC111025088 [Momordica charantia]2.9e-3556.38Show/hide
Query:  PQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAEEWVRELEALYAYVACNDQFK--------------------------------ARFKDLLYDYYF
        P+ F  PQ+EAQFIKDFK Y  PTFDGGSE+ TAAE WVRELEALYAY+ C DQFK                                ARFKDLLYDYY+
Subjt:  PQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAEEWVRELEALYAYVACNDQFK--------------------------------ARFKDLLYDYYF

Query:  SEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFALDLIPTEARKIKR
         E +KD +EA+FL L  G++TVAQY++KF E SRFAL+ IPTEA KIKR
Subjt:  SEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFALDLIPTEARKIKR

TrEMBL top hitse value%identityAlignment
A0A6J1D841 uncharacterized protein LOC1110181451.0e-3051.68Show/hide
Query:  PQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAEEWVRELEALYAYVACNDQFK--------------------------------ARFKDLLYDYYF
        PQ    PQ+EA+FIKDFK Y   TFD  SE+ TAAEEW+RELEALY Y+ C DQFK                                 RFKDLLYDYY+
Subjt:  PQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAEEWVRELEALYAYVACNDQFK--------------------------------ARFKDLLYDYYF

Query:  SEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFALDLIPTEARKIKR
         E +KD +EA+FL L  G+++VAQY++KF E S FAL+LIPTEA KIKR
Subjt:  SEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFALDLIPTEARKIKR

A0A6J1DQ01 uncharacterized protein LOC1110232505.4e-3555.03Show/hide
Query:  PQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAEEWVRELEALYAYVACNDQFK--------------------------------ARFKDLLYDYYF
        P+ F  PQ+EAQFIKDFK Y  PTFDGGS+K T AEEWVRELEALY Y+ C DQFK                                ARFKDLLYDYY+
Subjt:  PQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAEEWVRELEALYAYVACNDQFK--------------------------------ARFKDLLYDYYF

Query:  SEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFALDLIPTEARKIKR
         E +KD +EA+FL  + G++TVAQY++KF E SRFA +LIPTEA KIKR
Subjt:  SEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFALDLIPTEARKIKR

A0A6J1DUM2 uncharacterized protein LOC1110232474.0e-3851.69Show/hide
Query:  MPPCRSMRTRTNVNPALEGENVADPPTPLPQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAEEWVRELEALYAYVACNDQFK---------------
        MPP  SMR R + +PA  G  V     P PQ    PQ+EA+FIKDFK Y  PTFDG SE+ TA EEW+RELEALYAY+ C DQFK               
Subjt:  MPPCRSMRTRTNVNPALEGENVADPPTPLPQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAEEWVRELEALYAYVACNDQFK---------------

Query:  -----------------ARFKDLLYDYYFSEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFALDLIPTEARKIKR
                         ARFK+LLYDYY+ E +KD +EA+FL L  G+++VAQY++KF E SRFAL+LIPTEA KIKR
Subjt:  -----------------ARFKDLLYDYYFSEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFALDLIPTEARKIKR

A0A6J1DVA0 uncharacterized protein LOC1110234243.0e-3846.01Show/hide
Query:  MPPCRSMRTRTNVNPALEGENVADPPTP-----------------------------------LPQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAE
        MPP RSMR R +V+PA  GENVADPP P                                    P+    PQ+EAQFIKDFK Y  PTF GGSE+ T AE
Subjt:  MPPCRSMRTRTNVNPALEGENVADPPTP-----------------------------------LPQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAE

Query:  EWVRELEALYAYVACNDQFK--------------------------------ARFKDLLYDYYFSEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFA
        EWVRELEALYAY+ C DQFK                                ARFK+LLYD+Y+ E ++D +E +FL L  G++TVAQY++KF E S FA
Subjt:  EWVRELEALYAYVACNDQFK--------------------------------ARFKDLLYDYYFSEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFA

Query:  LDLIPTEARKIKR
        L+LIPTEA KIKR
Subjt:  LDLIPTEARKIKR

A0A6J1DXQ7 uncharacterized protein LOC1110250881.4e-3556.38Show/hide
Query:  PQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAEEWVRELEALYAYVACNDQFK--------------------------------ARFKDLLYDYYF
        P+ F  PQ+EAQFIKDFK Y  PTFDGGSE+ TAAE WVRELEALYAY+ C DQFK                                ARFKDLLYDYY+
Subjt:  PQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAEEWVRELEALYAYVACNDQFK--------------------------------ARFKDLLYDYYF

Query:  SEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFALDLIPTEARKIKR
         E +KD +EA+FL L  G++TVAQY++KF E SRFAL+ IPTEA KIKR
Subjt:  SEIMKDAEEAKFLQLTLGSMTVAQYDKKFVEFSRFALDLIPTEARKIKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCCTGTCGTAGCATGAGAACTCGCACTAACGTTAATCCAGCTCTCGAAGGCGAGAATGTAGCAGACCCTCCAACTCCTCTGCCCCAACAATTTCAAGCTCCTCA
GAATGAGGCCCAGTTCATCAAGGATTTCAAGCATTATAGACTTCCTACCTTTGACGGAGGAAGCGAGAAAACTACAGCAGCAGAGGAGTGGGTCAGGGAATTAGAAGCTC
TGTACGCGTATGTAGCCTGCAATGATCAGTTCAAGGCGAGATTCAAGGACTTGCTATATGACTATTACTTCTCGGAGATAATGAAGGACGCTGAGGAGGCAAAGTTTCTC
CAGTTGACTCTAGGCTCTATGACGGTAGCCCAGTATGACAAGAAGTTCGTGGAATTCTCTCGTTTTGCCCTGGATTTAATTCCCACCGAGGCGAGGAAGATTAAAAGGAC
AACACTGATAAGGCTCAACAACAATAGGAAGTCGGGTCCTCCTAAGGAGTACAAAGAAAGAGGCATCACTTTGGTCTATGCTGGTATCGAAAAAGGGTTTGTTTTAAGTG
CGGAAATGAAGGTCACTATTATAGAGAATGTCCAATGCCTAATTCAAACACTCAAAGTCGCCACCCACAACTATTCTTCCCCGGCAAGGCAGTGGCGGCGGACGACTCCA
CTGGCAGCGGCACACGACGGTAGCAGCAGACCCGTCTGTAACGCCCCGAGTCCCTCAGTTGGTTTTAAACCAAAGGAAAAGAGGAAAAAGAAAACAAAAAGGACTTCATC
TTCTTCTTCTCTCCTCCCTTGTTGTCCTAGCCGTCACCCACCCCTCTTCTTCTTCTTGTTCACCGGCGACCACACCCCACGGCTGCGACGGAAGCGGCGGCGCCTTCTCG
AAACAGCAGCAGCGGCGGCTGGCGACCACGTTCGTAGCAGCAGCAGCGGCGGCGCGACTTCGACCCAAACAGCAGCGGCGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCCTGTCGTAGCATGAGAACTCGCACTAACGTTAATCCAGCTCTCGAAGGCGAGAATGTAGCAGACCCTCCAACTCCTCTGCCCCAACAATTTCAAGCTCCTCA
GAATGAGGCCCAGTTCATCAAGGATTTCAAGCATTATAGACTTCCTACCTTTGACGGAGGAAGCGAGAAAACTACAGCAGCAGAGGAGTGGGTCAGGGAATTAGAAGCTC
TGTACGCGTATGTAGCCTGCAATGATCAGTTCAAGGCGAGATTCAAGGACTTGCTATATGACTATTACTTCTCGGAGATAATGAAGGACGCTGAGGAGGCAAAGTTTCTC
CAGTTGACTCTAGGCTCTATGACGGTAGCCCAGTATGACAAGAAGTTCGTGGAATTCTCTCGTTTTGCCCTGGATTTAATTCCCACCGAGGCGAGGAAGATTAAAAGGAC
AACACTGATAAGGCTCAACAACAATAGGAAGTCGGGTCCTCCTAAGGAGTACAAAGAAAGAGGCATCACTTTGGTCTATGCTGGTATCGAAAAAGGGTTTGTTTTAAGTG
CGGAAATGAAGGTCACTATTATAGAGAATGTCCAATGCCTAATTCAAACACTCAAAGTCGCCACCCACAACTATTCTTCCCCGGCAAGGCAGTGGCGGCGGACGACTCCA
CTGGCAGCGGCACACGACGGTAGCAGCAGACCCGTCTGTAACGCCCCGAGTCCCTCAGTTGGTTTTAAACCAAAGGAAAAGAGGAAAAAGAAAACAAAAAGGACTTCATC
TTCTTCTTCTCTCCTCCCTTGTTGTCCTAGCCGTCACCCACCCCTCTTCTTCTTCTTGTTCACCGGCGACCACACCCCACGGCTGCGACGGAAGCGGCGGCGCCTTCTCG
AAACAGCAGCAGCGGCGGCTGGCGACCACGTTCGTAGCAGCAGCAGCGGCGGCGCGACTTCGACCCAAACAGCAGCGGCGGAGTGA
Protein sequenceShow/hide protein sequence
MPPCRSMRTRTNVNPALEGENVADPPTPLPQQFQAPQNEAQFIKDFKHYRLPTFDGGSEKTTAAEEWVRELEALYAYVACNDQFKARFKDLLYDYYFSEIMKDAEEAKFL
QLTLGSMTVAQYDKKFVEFSRFALDLIPTEARKIKRTTLIRLNNNRKSGPPKEYKERGITLVYAGIEKGFVLSAEMKVTIIENVQCLIQTLKVATHNYSSPARQWRRTTP
LAAAHDGSSRPVCNAPSPSVGFKPKEKRKKKTKRTSSSSSLLPCCPSRHPPLFFFLFTGDHTPRLRRKRRRLLETAAAAAGDHVRSSSSGGATSTQTAAAE