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Moc04g15830 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g15830
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr4:11862629..11863573
RNA-Seq ExpressionMoc04g15830
SyntenyMoc04g15830
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026044.1 hypothetical protein E6C27_scaffold581G00300 [Cucumis melo var. makuwa]3.3e-1047.62Show/hide
Query:  SSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAGGVSRSPFACFEN
        SSHR+ +W  EL+WICH   GK   R +W + W +T+ FIW E N R+H GG +R P   F N
Subjt:  SSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAGGVSRSPFACFEN

TYK26641.1 putative non-LTR retroelement reverse transcriptase [Cucumis melo var. makuwa]1.6e-0947.54Show/hide
Query:  SSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAGGVSRSPFACF
        SSHR+ +W  EL+WICH   GK   R +W + W +T+ FIW E N R+H GG +R P   F
Subjt:  SSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAGGVSRSPFACF

XP_022158199.1 uncharacterized protein LOC111024737 [Momordica charantia]5.8e-1559.46Show/hide
Query:  DDFSLGLCISGMIAW------YGSSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAG
        D FS+G       AW      + SSHRVSYW TEL WICH+SAG S+ R VW LAWTSTVS +WRE N RIH G
Subjt:  DDFSLGLCISGMIAW------YGSSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAG

XP_022158861.1 uncharacterized protein LOC111025324 [Momordica charantia]2.3e-1667.8Show/hide
Query:  SGMIAWYGSSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAG
        +GMI+W GSSHRVSYW TEL WICH++ G S+ R VW LAWT TVS +WRE N RIH G
Subjt:  SGMIAWYGSSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAG

XP_031737043.1 uncharacterized protein LOC116402131 [Cucumis sativus]5.6e-1039.33Show/hide
Query:  GEWEQDDFSLGLCISGMIAW------YGSSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAGGVSRSPFACF
        G +E  D     C  G   W        SSHR+ YW  EL+WIC+   GK   R +W L W +T+ FIW+E N  +H GG  R P   F
Subjt:  GEWEQDDFSLGLCISGMIAW------YGSSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAGGVSRSPFACF

TrEMBL top hitse value%identityAlignment
A0A5A7SK23 Uncharacterized protein1.6e-1047.62Show/hide
Query:  SSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAGGVSRSPFACFEN
        SSHR+ +W  EL+WICH   GK   R +W + W +T+ FIW E N R+H GG +R P   F N
Subjt:  SSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAGGVSRSPFACFEN

A0A5A7TZS0 Reverse transcriptase domain-containing protein1.3e-0947.54Show/hide
Query:  SSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAGGVSRSPFACF
        SSHR+ +W  EL+WICH   GK   R +W + W +T+ FIW E N R+H GG +R P   F
Subjt:  SSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAGGVSRSPFACF

A0A5D3DSA8 Putative non-LTR retroelement reverse transcriptase7.9e-1047.54Show/hide
Query:  SSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAGGVSRSPFACF
        SSHR+ +W  EL+WICH   GK   R +W + W +T+ FIW E N R+H GG +R P   F
Subjt:  SSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAGGVSRSPFACF

A0A6J1DYP6 uncharacterized protein LOC1110247372.8e-1559.46Show/hide
Query:  DDFSLGLCISGMIAW------YGSSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAG
        D FS+G       AW      + SSHRVSYW TEL WICH+SAG S+ R VW LAWTSTVS +WRE N RIH G
Subjt:  DDFSLGLCISGMIAW------YGSSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAG

A0A6J1E271 uncharacterized protein LOC1110253241.1e-1667.8Show/hide
Query:  SGMIAWYGSSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAG
        +GMI+W GSSHRVSYW TEL WICH++ G S+ R VW LAWT TVS +WRE N RIH G
Subjt:  SGMIAWYGSSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCGTTGCGAAAATTGTAGCACTGCCGAGAACCACCAGAAGGAGACGGTGAAGCTGCAGAGGCCCGCCGCGAGTCTACCAGAAAATGTCGAATCTGGGGCCGACCG
TAGCTACTGTGGAACGCCCGAGGAAGAAGCTCGCACCGTCGGAGTTGTTGTGCATCGTCACTGCTGGTTCGCCAAGTACCGCCGTTGGGGTAGAGAAAACACGAACACGC
TGCTGCAAGAGGACGTTGGTCGCCGCTGCACTTCGCCGGAGAAGAAATGTGGTTGCAGGCTGGGATACCCGAAGAAGAAGAAGAAATTGGGGGAGGGGGAATGGGAACAA
GATGACTTTTCTTTAGGGCTTTGTATTTCTGGTATGATTGCTTGGTATGGTTCTTCTCACCGGGTTTCATATTGGTTTACTGAGCTTGCTTGGATCTGTCACATTAGTGC
TGGGAAGTCTGCTCATCGTCCTGTGTGGAGCTTGGCGTGGACTTCAACTGTTTCTTTTATCTGGAGGGAGCATAATGCTAGAATTCATGCGGGTGGGGTGAGTCGGTCTC
CTTTTGCATGCTTTGAAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATCGTTGCGAAAATTGTAGCACTGCCGAGAACCACCAGAAGGAGACGGTGAAGCTGCAGAGGCCCGCCGCGAGTCTACCAGAAAATGTCGAATCTGGGGCCGACCG
TAGCTACTGTGGAACGCCCGAGGAAGAAGCTCGCACCGTCGGAGTTGTTGTGCATCGTCACTGCTGGTTCGCCAAGTACCGCCGTTGGGGTAGAGAAAACACGAACACGC
TGCTGCAAGAGGACGTTGGTCGCCGCTGCACTTCGCCGGAGAAGAAATGTGGTTGCAGGCTGGGATACCCGAAGAAGAAGAAGAAATTGGGGGAGGGGGAATGGGAACAA
GATGACTTTTCTTTAGGGCTTTGTATTTCTGGTATGATTGCTTGGTATGGTTCTTCTCACCGGGTTTCATATTGGTTTACTGAGCTTGCTTGGATCTGTCACATTAGTGC
TGGGAAGTCTGCTCATCGTCCTGTGTGGAGCTTGGCGTGGACTTCAACTGTTTCTTTTATCTGGAGGGAGCATAATGCTAGAATTCATGCGGGTGGGGTGAGTCGGTCTC
CTTTTGCATGCTTTGAAAACTGA
Protein sequenceShow/hide protein sequence
MHRCENCSTAENHQKETVKLQRPAASLPENVESGADRSYCGTPEEEARTVGVVVHRHCWFAKYRRWGRENTNTLLQEDVGRRCTSPEKKCGCRLGYPKKKKKLGEGEWEQ
DDFSLGLCISGMIAWYGSSHRVSYWFTELAWICHISAGKSAHRPVWSLAWTSTVSFIWREHNARIHAGGVSRSPFACFEN