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Moc04g15880 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g15880
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionextensin-like
Genome locationchr4:11889963..11890694
RNA-Seq ExpressionMoc04g15880
SyntenyMoc04g15880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154805.1 extensin-like [Momordica charantia]1.7e-1939.74Show/hide
Query:  MHRIKFKVNRKRALKLELSASSGSSGDFKEAAETILLEAFEEQSHTQQSPTSSEHTSVDAELPLPPPLVVSPQVNAPVLAASFFQTQPNKSLLAGEDPEK
        M RIK + NRKR LKLELSASSGS+GDFKEAAETI  EA EE     QSPTSSEHT  +AE+  PPP V SPQ                           
Subjt:  MHRIKFKVNRKRALKLELSASSGSSGDFKEAAETILLEAFEEQSHTQQSPTSSEHTSVDAELPLPPPLVVSPQVNAPVLAASFFQTQPNKSLLAGEDPEK

Query:  LTAPSPLTESPPTVTGNPPPSPTFPQTPQPTTTPSSTSTILPPILVEEIHPHVPSKSTPTGEPTSRIRKSKRPAQFVPSPSLIKKRKTLKAPPPPPIKAK
                                                                             +KRPAQ V SPS  KK KT K P PPP KAK
Subjt:  LTAPSPLTESPPTVTGNPPPSPTFPQTPQPTTTPSSTSTILPPILVEEIHPHVPSKSTPTGEPTSRIRKSKRPAQFVPSPSLIKKRKTLKAPPPPPIKAK

Query:  AAKSASVSEGKRRSRTTSVPQIPQTPSFS
        A K ASVSE KRRSR  ++PQ+P TPS S
Subjt:  AAKSASVSEGKRRSRTTSVPQIPQTPSFS
TrEMBL top hitse value%identityAlignment
A0A6J1DKP0 extensin-like8.2e-2039.74Show/hide
Query:  MHRIKFKVNRKRALKLELSASSGSSGDFKEAAETILLEAFEEQSHTQQSPTSSEHTSVDAELPLPPPLVVSPQVNAPVLAASFFQTQPNKSLLAGEDPEK
        M RIK + NRKR LKLELSASSGS+GDFKEAAETI  EA EE     QSPTSSEHT  +AE+  PPP V SPQ                           
Subjt:  MHRIKFKVNRKRALKLELSASSGSSGDFKEAAETILLEAFEEQSHTQQSPTSSEHTSVDAELPLPPPLVVSPQVNAPVLAASFFQTQPNKSLLAGEDPEK

Query:  LTAPSPLTESPPTVTGNPPPSPTFPQTPQPTTTPSSTSTILPPILVEEIHPHVPSKSTPTGEPTSRIRKSKRPAQFVPSPSLIKKRKTLKAPPPPPIKAK
                                                                             +KRPAQ V SPS  KK KT K P PPP KAK
Subjt:  LTAPSPLTESPPTVTGNPPPSPTFPQTPQPTTTPSSTSTILPPILVEEIHPHVPSKSTPTGEPTSRIRKSKRPAQFVPSPSLIKKRKTLKAPPPPPIKAK

Query:  AAKSASVSEGKRRSRTTSVPQIPQTPSFS
        A K ASVSE KRRSR  ++PQ+P TPS S
Subjt:  AAKSASVSEGKRRSRTTSVPQIPQTPSFS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATAGAATAAAATTTAAGGTGAATAGGAAGAGAGCGCTGAAGCTCGAGCTTTCAGCAAGCTCTGGGTCGAGCGGCGACTTCAAGGAGGCCGCTGAAACCATCCTTTT
GGAGGCATTTGAGGAGCAGAGCCACACCCAGCAAAGCCCCACCAGCTCGGAACACACATCAGTTGACGCTGAGCTTCCATTGCCGCCTCCTCTTGTTGTCAGCCCTCAGG
TAAACGCCCCTGTCCTTGCTGCCTCCTTCTTTCAGACCCAGCCTAATAAATCCTTACTCGCCGGTGAAGACCCAGAAAAACTCACCGCTCCTTCTCCTCTCACTGAAAGC
CCTCCTACCGTTACTGGAAATCCACCCCCTTCACCTACCTTTCCACAGACTCCACAACCCACGACCACCCCTTCCTCAACTTCCACCATCCTTCCACCCATCCTCGTAGA
AGAAATCCATCCGCATGTCCCCTCTAAATCCACACCTACTGGTGAACCGACCTCGCGAATTCGAAAGAGTAAGCGGCCAGCCCAATTTGTCCCAAGCCCCAGCCTGATTA
AAAAGAGGAAAACACTAAAAGCTCCTCCACCGCCCCCTATCAAAGCAAAGGCTGCAAAATCCGCTTCTGTGTCTGAAGGTAAGCGTCGCAGCCGGACGACCTCTGTTCCC
CAGATTCCCCAAACACCGAGCTTCTCTCTACTGGCCAAGCAACATTCCAGAAGTTCGTTGATTCAGAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCATAGAATAAAATTTAAGGTGAATAGGAAGAGAGCGCTGAAGCTCGAGCTTTCAGCAAGCTCTGGGTCGAGCGGCGACTTCAAGGAGGCCGCTGAAACCATCCTTTT
GGAGGCATTTGAGGAGCAGAGCCACACCCAGCAAAGCCCCACCAGCTCGGAACACACATCAGTTGACGCTGAGCTTCCATTGCCGCCTCCTCTTGTTGTCAGCCCTCAGG
TAAACGCCCCTGTCCTTGCTGCCTCCTTCTTTCAGACCCAGCCTAATAAATCCTTACTCGCCGGTGAAGACCCAGAAAAACTCACCGCTCCTTCTCCTCTCACTGAAAGC
CCTCCTACCGTTACTGGAAATCCACCCCCTTCACCTACCTTTCCACAGACTCCACAACCCACGACCACCCCTTCCTCAACTTCCACCATCCTTCCACCCATCCTCGTAGA
AGAAATCCATCCGCATGTCCCCTCTAAATCCACACCTACTGGTGAACCGACCTCGCGAATTCGAAAGAGTAAGCGGCCAGCCCAATTTGTCCCAAGCCCCAGCCTGATTA
AAAAGAGGAAAACACTAAAAGCTCCTCCACCGCCCCCTATCAAAGCAAAGGCTGCAAAATCCGCTTCTGTGTCTGAAGGTAAGCGTCGCAGCCGGACGACCTCTGTTCCC
CAGATTCCCCAAACACCGAGCTTCTCTCTACTGGCCAAGCAACATTCCAGAAGTTCGTTGATTCAGAGATAA
Protein sequenceShow/hide protein sequence
MHRIKFKVNRKRALKLELSASSGSSGDFKEAAETILLEAFEEQSHTQQSPTSSEHTSVDAELPLPPPLVVSPQVNAPVLAASFFQTQPNKSLLAGEDPEKLTAPSPLTES
PPTVTGNPPPSPTFPQTPQPTTTPSSTSTILPPILVEEIHPHVPSKSTPTGEPTSRIRKSKRPAQFVPSPSLIKKRKTLKAPPPPPIKAKAAKSASVSEGKRRSRTTSVP
QIPQTPSFSLLAKQHSRSSLIQR