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Moc04g15890 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g15890
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionnucleolar protein 58-like
Genome locationchr4:11890801..11891381
RNA-Seq ExpressionMoc04g15890
SyntenyMoc04g15890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]3.8e-0731.18Show/hide
Query:  LVWEFYANSYPNRVGHTTVWEVEIDWTSKRINKLLKLPNNPEVELNAMIQQPSMRELDN-LHLVGIQGAVLQVTDKGACSLKSGQLT-------------
        LV EFYAN          V  V++ W+ + IN +  L  +P  E +  I+  +  +L   L  V + GA   V+ +GA +     LT             
Subjt:  LVWEFYANSYPNRVGHTTVWEVEIDWTSKRINKLLKLPNNPEVELNAMIQQPSMRELDN-LHLVGIQGAVLQVTDKGACSLKSGQLT-------------

Query:  ------GKLTFGCRF-----------IDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPLKEKLVIDRSTVERL
              GK     R            I+VG++IH EI  CA +KT  LFFPSLIT  C     P L +EE L     ID   V R+
Subjt:  ------GKLTFGCRF-----------IDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPLKEKLVIDRSTVERL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.0e-0731.72Show/hide
Query:  LVWEFYANSYPNRVGHTTVWEVEIDWTSKRINKLLKLPNNPEVELNAMIQQPSMRELDN-LHLVGIQGAVLQVTDKGACSLKSGQLT-------------
        LV EFYAN          V  V++ W+ + IN +  L  +P  E +  IQ  + ++L   L  V   GA   V+ +GA +     LT             
Subjt:  LVWEFYANSYPNRVGHTTVWEVEIDWTSKRINKLLKLPNNPEVELNAMIQQPSMRELDN-LHLVGIQGAVLQVTDKGACSLKSGQLT-------------

Query:  ------GKLTFGCRF-----------IDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPLKEKLVIDRSTVERL
              GK     R            I+VG++IH EI  CA +KT  LFFPSLIT  C     P L +EE L     ID   V R+
Subjt:  ------GKLTFGCRF-----------IDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPLKEKLVIDRSTVERL

PON65869.1 hypothetical protein PanWU01x14_113580, partial [Parasponia andersonii]3.6e-0541.18Show/hide
Query:  QVTDKGACSLKSGQLTGKLTFGCRFIDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPLKEKLVIDRSTVERL
        ++  K    L    LTGK       I+VG++IHREI  CA +K   LFFPSLIT  C     P L +EE L     ID   V R+
Subjt:  QVTDKGACSLKSGQLTGKLTFGCRFIDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPLKEKLVIDRSTVERL

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]7.9e-0545.07Show/hide
Query:  QVTDKGACSLKSGQLTGKLTFGCRFIDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPL
        +   K   SL    LTGK       I+VG++IHREI  CA +K+  LFFPSLIT+ C     P L +EE L
Subjt:  QVTDKGACSLKSGQLTGKLTFGCRFIDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPL

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]5.0e-0731.55Show/hide
Query:  LVWEFYANSYPNRVGHTTVWEVEIDWTSKRINKLLKL--PNNPEVELNAMIQQPSMRELDNLHLVGIQGAVLQVTDKGACSLKSGQLT------------
        LV EFYAN          V  V++ W+ + IN +  L  P +   E    I +P +  +  L  V   GA   V+ +GA +     LT            
Subjt:  LVWEFYANSYPNRVGHTTVWEVEIDWTSKRINKLLKL--PNNPEVELNAMIQQPSMRELDNLHLVGIQGAVLQVTDKGACSLKSGQLT------------

Query:  -------GKLTFGCRF-----------IDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPLKEKLVIDRSTVERL
               GK+    R            I+VG++IH EI  CA +KT  LFFPSLIT  C  R+ P L +EE L     ID   V R+
Subjt:  -------GKLTFGCRF-----------IDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPLKEKLVIDRSTVERL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.8e-0731.18Show/hide
Query:  LVWEFYANSYPNRVGHTTVWEVEIDWTSKRINKLLKLPNNPEVELNAMIQQPSMRELDN-LHLVGIQGAVLQVTDKGACSLKSGQLT-------------
        LV EFYAN          V  V++ W+ + IN +  L  +P  E +  I+  +  +L   L  V + GA   V+ +GA +     LT             
Subjt:  LVWEFYANSYPNRVGHTTVWEVEIDWTSKRINKLLKLPNNPEVELNAMIQQPSMRELDN-LHLVGIQGAVLQVTDKGACSLKSGQLT-------------

Query:  ------GKLTFGCRF-----------IDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPLKEKLVIDRSTVERL
              GK     R            I+VG++IH EI  CA +KT  LFFPSLIT  C     P L +EE L     ID   V R+
Subjt:  ------GKLTFGCRF-----------IDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPLKEKLVIDRSTVERL

A0A2P5BCG4 Uncharacterized protein (Fragment)4.8e-0831.72Show/hide
Query:  LVWEFYANSYPNRVGHTTVWEVEIDWTSKRINKLLKLPNNPEVELNAMIQQPSMRELDN-LHLVGIQGAVLQVTDKGACSLKSGQLT-------------
        LV EFYAN          V  V++ W+ + IN +  L  +P  E +  IQ  + ++L   L  V   GA   V+ +GA +     LT             
Subjt:  LVWEFYANSYPNRVGHTTVWEVEIDWTSKRINKLLKLPNNPEVELNAMIQQPSMRELDN-LHLVGIQGAVLQVTDKGACSLKSGQLT-------------

Query:  ------GKLTFGCRF-----------IDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPLKEKLVIDRSTVERL
              GK     R            I+VG++IH EI  CA +KT  LFFPSLIT  C     P L +EE L     ID   V R+
Subjt:  ------GKLTFGCRF-----------IDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPLKEKLVIDRSTVERL

A0A2P5CXU3 Uncharacterized protein (Fragment)1.7e-0541.18Show/hide
Query:  QVTDKGACSLKSGQLTGKLTFGCRFIDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPLKEKLVIDRSTVERL
        ++  K    L    LTGK       I+VG++IHREI  CA +K   LFFPSLIT  C     P L +EE L     ID   V R+
Subjt:  QVTDKGACSLKSGQLTGKLTFGCRFIDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPLKEKLVIDRSTVERL

A0A2P5DAQ2 Uncharacterized protein3.8e-0545.07Show/hide
Query:  QVTDKGACSLKSGQLTGKLTFGCRFIDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPL
        +   K   SL    LTGK       I+VG++IHREI  CA +K+  LFFPSLIT+ C     P L +EE L
Subjt:  QVTDKGACSLKSGQLTGKLTFGCRFIDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPL

A0A2P5DXM3 Uncharacterized protein2.4e-0731.55Show/hide
Query:  LVWEFYANSYPNRVGHTTVWEVEIDWTSKRINKLLKL--PNNPEVELNAMIQQPSMRELDNLHLVGIQGAVLQVTDKGACSLKSGQLT------------
        LV EFYAN          V  V++ W+ + IN +  L  P +   E    I +P +  +  L  V   GA   V+ +GA +     LT            
Subjt:  LVWEFYANSYPNRVGHTTVWEVEIDWTSKRINKLLKL--PNNPEVELNAMIQQPSMRELDNLHLVGIQGAVLQVTDKGACSLKSGQLT------------

Query:  -------GKLTFGCRF-----------IDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPLKEKLVIDRSTVERL
               GK+    R            I+VG++IH EI  CA +KT  LFFPSLIT  C  R+ P L +EE L     ID   V R+
Subjt:  -------GKLTFGCRF-----------IDVGQLIHREIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPLKEKLVIDRSTVERL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGTTTTACCAGAGCTCGTGTGGGAATTCTACGCCAACTCTTACCCTAACAGAGTGGGGCACACTACGGTGTGGGAGGTAGAAATCGATTGGACGTCGAAGAGGAT
CAACAAGCTGCTTAAGCTGCCCAACAATCCAGAGGTTGAGCTCAACGCGATGATCCAGCAGCCCTCAATGCGGGAGCTTGACAATCTACATCTAGTAGGAATTCAGGGTG
CTGTGTTGCAAGTGACAGACAAGGGTGCCTGCTCGTTGAAATCTGGTCAGCTCACCGGGAAACTAACGTTTGGCTGTCGCTTCATCGATGTCGGACAACTTATCCACCGG
GAGATCGTTCAATGCGCAACGAAGAAAACTGACCGCCTGTTTTTCCCCAGCCTTATCACTAACCGCTGCCTTCGCAGAGATGTGCCCATCTTGGATGACGAAGAACCCCT
CAAAGAAAAGTTGGTGATAGATAGGAGTACGGTGGAAAGACTGATGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTGTTTTACCAGAGCTCGTGTGGGAATTCTACGCCAACTCTTACCCTAACAGAGTGGGGCACACTACGGTGTGGGAGGTAGAAATCGATTGGACGTCGAAGAGGAT
CAACAAGCTGCTTAAGCTGCCCAACAATCCAGAGGTTGAGCTCAACGCGATGATCCAGCAGCCCTCAATGCGGGAGCTTGACAATCTACATCTAGTAGGAATTCAGGGTG
CTGTGTTGCAAGTGACAGACAAGGGTGCCTGCTCGTTGAAATCTGGTCAGCTCACCGGGAAACTAACGTTTGGCTGTCGCTTCATCGATGTCGGACAACTTATCCACCGG
GAGATCGTTCAATGCGCAACGAAGAAAACTGACCGCCTGTTTTTCCCCAGCCTTATCACTAACCGCTGCCTTCGCAGAGATGTGCCCATCTTGGATGACGAAGAACCCCT
CAAAGAAAAGTTGGTGATAGATAGGAGTACGGTGGAAAGACTGATGAACTAG
Protein sequenceShow/hide protein sequence
MLVLPELVWEFYANSYPNRVGHTTVWEVEIDWTSKRINKLLKLPNNPEVELNAMIQQPSMRELDNLHLVGIQGAVLQVTDKGACSLKSGQLTGKLTFGCRFIDVGQLIHR
EIVQCATKKTDRLFFPSLITNRCLRRDVPILDDEEPLKEKLVIDRSTVERLMN