; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g15910 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g15910
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr4:11894746..11899366
RNA-Seq ExpressionMoc04g15910
SyntenyMoc04g15910
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR005162 - Retrotransposon gag domain
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA3003162.1 uncharacterized protein LOC111369392 isoform X1, partial [Olea europaea subsp. europaea]2.1e-5939.63Show/hide
Query:  VGESSHRPLDSQE--DIVDQDEGVMARIAALRVRMLRRDPDKDFKIELLRALGATDFSRTADPADAE------------------------------SAG
        V ES H   D +   D+   D  ++A   A  V    R+ DKD+ IE    LGA  F+ TADP DAE                              SA 
Subjt:  VGESSHRPLDSQE--DIVDQDEGVMARIAALRVRMLRRDPDKDFKIELLRALGATDFSRTADPADAE------------------------------SAG

Query:  EWWESVIARQPEAEKLSWKEFKNLFNEAYYPRCNRDTKRSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTASRWQEF
        +WW SV ++  +   ++W EFK+ FNE +YPR  +  K++EFL+LVQ S TVAEYQKK++ELSKYA  ++ DE+D+CRRFE GL++EIRS  TAS ++  
Subjt:  EWWESVIARQPEAEKLSWKEFKNLFNEAYYPRCNRDTKRSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTASRWQEF

Query:  GPLVEVAVRVKKSLLDKKNQRKVSKNVRCTFSSSTSSLSGRHFRDSSRRFTP----EVSGRGSFKPRYRGSQNFRANVNFPQQTTSGSSQYRRPSGSQKS
        G LVE A+RV+K L ++   +   + +R    S++ S +GR     SRR        +S  GSFK R  GSQ  R++    QQ  S  +Q +R S    +
Subjt:  GPLVEVAVRVKKSLLDKKNQRKVSKNVRCTFSSSTSSLSGRHFRDSSRRFTP----EVSGRGSFKPRYRGSQNFRANVNFPQQTTSGSSQYRRPSGSQKS

Query:  GQQAESGPNYTRYPVPKNCGKSHRGECLWRASIVCYNCGQAGHMKRECPQLWQEGSASQGAS--SRPMVPGRSDSQ------AKLVSEGQPNTGNSSGVK
          Q++S     R+P  + CGK H  ECL +   VCY+CGQ GHM+RECP  +Q+GS   G S  S   +  ++ +Q      A   S  Q +   S G +
Subjt:  GQQAESGPNYTRYPVPKNCGKSHRGECLWRASIVCYNCGQAGHMKRECPQLWQEGSASQGAS--SRPMVPGRSDSQ------AKLVSEGQPNTGNSSGVK

Query:  SKGQVGRPRGQGKIFAMMQHEAEELPDLV
         KGQ GRPR QG++FA+ QH+A+ELPD+V
Subjt:  SKGQVGRPRGQGKIFAMMQHEAEELPDLV

KAA0037581.1 reverse transcriptase [Cucumis melo var. makuwa]3.0e-5837.3Show/hide
Query:  DPDKDFKIELLRALGATDFSRTADPADAE------------------------------SAGEWWESVIARQPEAEKLSWKEFKNLFNEAYYPRCNRDTK
        D +K + IE L+ LGAT F  + DPADAE                               A  WW+S+IAR+ +A  L W+ F+ +F E YYP    + K
Subjt:  DPDKDFKIELLRALGATDFSRTADPADAE------------------------------SAGEWWESVIARQPEAEKLSWKEFKNLFNEAYYPRCNRDTK

Query:  RSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTA-SRWQEFGPLVEVAVRVKKSLLDKKNQRKVSKNVRCTFSSSTSS
        R EFL+L Q S++VA+Y++KY ELS+YA  ++  E DRC RFE GLR EIR+  TA ++W  F  LVE A+RVK+S++++K+  ++S+ V     S+TS 
Subjt:  RSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTA-SRWQEFGPLVEVAVRVKKSLLDKKNQRKVSKNVRCTFSSSTSS

Query:  LSGRHFRDSSRRFTP--EVSGRGSFKPRYRGS--QNFRANVNFPQQTTSGSSQYRRPSGSQKSGQQAESGPNYTRYPVPKNCGKSHRGECLWRASIVCYN
        + GR      RRFTP   VSG   FK R  G   +   +   + +Q+   SSQ        ++GQ  ES  + ++     +CGKSH+G C+  A  VCY 
Subjt:  LSGRHFRDSSRRFTP--EVSGRGSFKPRYRGS--QNFRANVNFPQQTTSGSSQYRRPSGSQKSGQQAESGPNYTRYPVPKNCGKSHRGECLWRASIVCYN

Query:  CGQAGHMKRECPQLWQEGSASQGASSRPMVPGRSDSQAKLVSEGQPNTGNSSGVKSKGQVGRPRGQGKIFAMMQHEAEELPDLVTD--------------
        CG+ GH KR+CPQL       QG  S  +   R  + A     G+     +SG + KG VGRPR QGK++AM Q EAE+ PD++T+              
Subjt:  CGQAGHMKRECPQLWQEGSASQGASSRPMVPGRSDSQAKLVSEGQPNTGNSSGVKSKGQVGRPRGQGKIFAMMQHEAEELPDLVTD--------------

Query:  -----------------RKLEPLPSELVVATPGGISLIADSVYRD
                         R LEPLP ELV+ TP G  L+   V  D
Subjt:  -----------------RKLEPLPSELVVATPGGISLIADSVYRD

KAA0060484.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]2.7e-6739.65Show/hide
Query:  MAEDVVGESSHRPLDSQEDIVDQDEGVMARIAAL-RVRMLRRDPDKDFKIELLRALGATDFSRTADPADAES----------------------------
        M+ +  G     P        D +    AR AA+      + DP+K + IE L+ALGAT F+ T +PADAE+                            
Subjt:  MAEDVVGESSHRPLDSQEDIVDQDEGVMARIAAL-RVRMLRRDPDKDFKIELLRALGATDFSRTADPADAES----------------------------

Query:  --AGEWWESVIARQPEAEKLSWKEFKNLFNEAYYPRCNRDTKRSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTA-S
          A +WW    +R+     +SW EFK  F + +YPR  RD KR+EFL+L QGSMT+AEY+KKY ELS YAT VIEDE++RC+RFE+GLR+EIR+  TA +
Subjt:  --AGEWWESVIARQPEAEKLSWKEFKNLFNEAYYPRCNRDTKRSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTA-S

Query:  RWQEFGPLVEVAVRVKKSLLDKKNQRKVSKNVRCTFSSSTSSLSGRHFRDSSRRFTPEVSGRGSFKPRYRGSQNFRANVNFPQQTTSGSSQYRRPSGSQK
         W +F  LVE A+RV+KSL ++K +R+ SKNV CTFSSS      R  ++ S RF P VS RG+FK +Y GS   ++  +   Q +SGSS     +G   
Subjt:  RWQEFGPLVEVAVRVKKSLLDKKNQRKVSKNVRCTFSSSTSSLSGRHFRDSSRRFTPEVSGRGSFKPRYRGSQNFRANVNFPQQTTSGSSQYRRPSGSQK

Query:  SGQQAESGPNYTRYPVPKNCGKSHRGECLWRASIVCYNCGQAGHMKRECPQLWQEG-----SASQGASSRPMVPGRSDSQAKLVSEGQPNTGNSSGVKSK
                          +  +S R       S VCYNCGQ GH +R+CP L   G     + SQ  S +P +          ++ G+     SSG K K
Subjt:  SGQQAESGPNYTRYPVPKNCGKSHRGECLWRASIVCYNCGQAGHMKRECPQLWQEG-----SASQGASSRPMVPGRSDSQAKLVSEGQPNTGNSSGVKSK

Query:  GQVGRPRGQGKIFAMMQHEAEELPDLVT---DRKLEPLPSELVVATPGGISLIADSVYR
        G VGR R +GK+FAM Q EA + P++VT   D++LE L  EL+++T  G S I +SVYR
Subjt:  GQVGRPRGQGKIFAMMQHEAEELPDLVT---DRKLEPLPSELVVATPGGISLIADSVYR

XP_022846657.1 uncharacterized protein LOC111369392 isoform X1 [Olea europaea var. sylvestris]7.6e-6239.81Show/hide
Query:  VGESSHRPLD--SQEDIVDQDEGVMARIAALRVRMLRRDPDKDFKIELLRALGATDFSRTADPADA------------------------------ESAG
        V ES H+P +   Q +++  D   + RI A+ V    R+ D+DF IE    LGA  F+ TADPA A                              E A 
Subjt:  VGESSHRPLD--SQEDIVDQDEGVMARIAALRVRMLRRDPDKDFKIELLRALGATDFSRTADPADA------------------------------ESAG

Query:  EWWESVIARQPEAEKLSWKEFKNLFNEAYYPRCNRDTKRSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTASRWQEF
        +WW+SV +   +   ++W EF+ +F + YYPR  +D K+ EFLKLVQG MTVAEYQ +++ELSKYA  ++ +EID+CRRFE+GLR+EIRS  TA+ W  F
Subjt:  EWWESVIARQPEAEKLSWKEFKNLFNEAYYPRCNRDTKRSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTASRWQEF

Query:  GPLVEVAVRVKKSLLDKKNQRKVSKNVRCTFSSSTSSLSG-RHFRDSSRRFTPEVSGRGSFKPRYRGSQNFRANVNFPQQTTSGSSQYRRPSGSQKSGQQ
        G LVE A+RV+KS+ D+ + R+ +   R + S + +S+S  R  R  SR F P VS    FK R RGSQ  R + +  QQ  +  +  +  S    + +Q
Subjt:  GPLVEVAVRVKKSLLDKKNQRKVSKNVRCTFSSSTSSLSG-RHFRDSSRRFTPEVSGRGSFKPRYRGSQNFRANVNFPQQTTSGSSQYRRPSGSQKSGQQ

Query:  AESGPNYTRYPVPKNCGKSHRGECL-WRASIVCYNCGQAGHMKRECPQLWQE-------------GSASQGASSRPMVPGRSDSQAKLVSEGQPNTGNSS
         ES  + TR P  + C + H G CL ++ S VCY+CGQ  H++R CP L QE             GS  Q  + R     R+ +     S  Q N  + S
Subjt:  AESGPNYTRYPVPKNCGKSHRGECL-WRASIVCYNCGQAGHMKRECPQLWQE-------------GSASQGASSRPMVPGRSDSQAKLVSEGQPNTGNSS

Query:  GVKSKGQVGRPRGQGKIFAMMQHEAEELPDLV
        G KSKGQ GRP+ QGK+FAM Q  AEE PD++
Subjt:  GVKSKGQVGRPRGQGKIFAMMQHEAEELPDLV

XP_022846659.1 uncharacterized protein LOC111369392 isoform X2 [Olea europaea var. sylvestris]7.6e-6239.81Show/hide
Query:  VGESSHRPLD--SQEDIVDQDEGVMARIAALRVRMLRRDPDKDFKIELLRALGATDFSRTADPADA------------------------------ESAG
        V ES H+P +   Q +++  D   + RI A+ V    R+ D+DF IE    LGA  F+ TADPA A                              E A 
Subjt:  VGESSHRPLD--SQEDIVDQDEGVMARIAALRVRMLRRDPDKDFKIELLRALGATDFSRTADPADA------------------------------ESAG

Query:  EWWESVIARQPEAEKLSWKEFKNLFNEAYYPRCNRDTKRSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTASRWQEF
        +WW+SV +   +   ++W EF+ +F + YYPR  +D K+ EFLKLVQG MTVAEYQ +++ELSKYA  ++ +EID+CRRFE+GLR+EIRS  TA+ W  F
Subjt:  EWWESVIARQPEAEKLSWKEFKNLFNEAYYPRCNRDTKRSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTASRWQEF

Query:  GPLVEVAVRVKKSLLDKKNQRKVSKNVRCTFSSSTSSLSG-RHFRDSSRRFTPEVSGRGSFKPRYRGSQNFRANVNFPQQTTSGSSQYRRPSGSQKSGQQ
        G LVE A+RV+KS+ D+ + R+ +   R + S + +S+S  R  R  SR F P VS    FK R RGSQ  R + +  QQ  +  +  +  S    + +Q
Subjt:  GPLVEVAVRVKKSLLDKKNQRKVSKNVRCTFSSSTSSLSG-RHFRDSSRRFTPEVSGRGSFKPRYRGSQNFRANVNFPQQTTSGSSQYRRPSGSQKSGQQ

Query:  AESGPNYTRYPVPKNCGKSHRGECL-WRASIVCYNCGQAGHMKRECPQLWQE-------------GSASQGASSRPMVPGRSDSQAKLVSEGQPNTGNSS
         ES  + TR P  + C + H G CL ++ S VCY+CGQ  H++R CP L QE             GS  Q  + R     R+ +     S  Q N  + S
Subjt:  AESGPNYTRYPVPKNCGKSHRGECL-WRASIVCYNCGQAGHMKRECPQLWQE-------------GSASQGASSRPMVPGRSDSQAKLVSEGQPNTGNSS

Query:  GVKSKGQVGRPRGQGKIFAMMQHEAEELPDLV
        G KSKGQ GRP+ QGK+FAM Q  AEE PD++
Subjt:  GVKSKGQVGRPRGQGKIFAMMQHEAEELPDLV

TrEMBL top hitse value%identityAlignment
A0A5A7UZM6 Gag protease polyprotein-like protein1.3e-6739.65Show/hide
Query:  MAEDVVGESSHRPLDSQEDIVDQDEGVMARIAAL-RVRMLRRDPDKDFKIELLRALGATDFSRTADPADAES----------------------------
        M+ +  G     P        D +    AR AA+      + DP+K + IE L+ALGAT F+ T +PADAE+                            
Subjt:  MAEDVVGESSHRPLDSQEDIVDQDEGVMARIAAL-RVRMLRRDPDKDFKIELLRALGATDFSRTADPADAES----------------------------

Query:  --AGEWWESVIARQPEAEKLSWKEFKNLFNEAYYPRCNRDTKRSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTA-S
          A +WW    +R+     +SW EFK  F + +YPR  RD KR+EFL+L QGSMT+AEY+KKY ELS YAT VIEDE++RC+RFE+GLR+EIR+  TA +
Subjt:  --AGEWWESVIARQPEAEKLSWKEFKNLFNEAYYPRCNRDTKRSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTA-S

Query:  RWQEFGPLVEVAVRVKKSLLDKKNQRKVSKNVRCTFSSSTSSLSGRHFRDSSRRFTPEVSGRGSFKPRYRGSQNFRANVNFPQQTTSGSSQYRRPSGSQK
         W +F  LVE A+RV+KSL ++K +R+ SKNV CTFSSS      R  ++ S RF P VS RG+FK +Y GS   ++  +   Q +SGSS     +G   
Subjt:  RWQEFGPLVEVAVRVKKSLLDKKNQRKVSKNVRCTFSSSTSSLSGRHFRDSSRRFTPEVSGRGSFKPRYRGSQNFRANVNFPQQTTSGSSQYRRPSGSQK

Query:  SGQQAESGPNYTRYPVPKNCGKSHRGECLWRASIVCYNCGQAGHMKRECPQLWQEG-----SASQGASSRPMVPGRSDSQAKLVSEGQPNTGNSSGVKSK
                          +  +S R       S VCYNCGQ GH +R+CP L   G     + SQ  S +P +          ++ G+     SSG K K
Subjt:  SGQQAESGPNYTRYPVPKNCGKSHRGECLWRASIVCYNCGQAGHMKRECPQLWQEG-----SASQGASSRPMVPGRSDSQAKLVSEGQPNTGNSSGVKSK

Query:  GQVGRPRGQGKIFAMMQHEAEELPDLVT---DRKLEPLPSELVVATPGGISLIADSVYR
        G VGR R +GK+FAM Q EA + P++VT   D++LE L  EL+++T  G S I +SVYR
Subjt:  GQVGRPRGQGKIFAMMQHEAEELPDLVT---DRKLEPLPSELVVATPGGISLIADSVYR

A0A5A7VQD2 Putative Gag-pol protein9.4e-5837.08Show/hide
Query:  DPDKDFKIELLRALGATDFSRTADPADAES------------------------------AGEWWESVIARQPEAEKLSWKEFKNLFNEAYYPRCNRDTK
        DP+K + IE L+ LGAT F  + DPADAE+                              A  WW+S++AR+ +A  L W+ F+ +F + YYP    + K
Subjt:  DPDKDFKIELLRALGATDFSRTADPADAES------------------------------AGEWWESVIARQPEAEKLSWKEFKNLFNEAYYPRCNRDTK

Query:  RSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTA-SRWQEFGPLVEVAVRVKKSLLDKKNQRKVSKNVRCTFSSSTSS
        R EFL L QGS++VAEY++KY ELS+YA  +I  E DRCRRFE GLR EIR+  TA ++W  F  LVE A+RV++S+ ++K+  ++S+      +S+ S 
Subjt:  RSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTA-SRWQEFGPLVEVAVRVKKSLLDKKNQRKVSKNVRCTFSSSTSS

Query:  LSGRHFRDSSRRFTP--EVSGRGSFKPRYRG--SQNFRANVNFPQQTTSGSSQYRRPSGSQKSGQQAESGPNYTRYPVPKNCGKSHRGECLWRASIVCYN
          GR      RRFTP   +S R  FK R  G  S+N      F +Q+    SQ  R +   + GQ  ES  +  R     +CG++HRG+CL  A  VCY 
Subjt:  LSGRHFRDSSRRFTP--EVSGRGSFKPRYRG--SQNFRANVNFPQQTTSGSSQYRRPSGSQKSGQQAESGPNYTRYPVPKNCGKSHRGECLWRASIVCYN

Query:  CGQAGHMKRECPQLWQEGSASQGASSRPMVPGRSDSQAKLVSEGQPNTGNSSGVKSKGQVGRPRGQGKIFAMMQHEAEELPDLVT---------------
        CGQ GH K++CPQL       QG  S+ +      S+  +V      T  +SG + KG VGRPR QGK++AM Q E E+ PD++T               
Subjt:  CGQAGHMKRECPQLWQEGSASQGASSRPMVPGRSDSQAKLVSEGQPNTGNSSGVKSKGQVGRPRGQGKIFAMMQHEAEELPDLVT---------------

Query:  ----------------DRKLEPLPSELVVATPGGISLIADSVYRD
                        +R LEPL   L + TP G  L+ + V R+
Subjt:  ----------------DRKLEPLPSELVVATPGGISLIADSVYRD

A0A5A7VQD2 Putative Gag-pol protein8.3e-1469.23Show/hide
Query:  DDPILMQLSENLSYEEKPVQILDRKEQVLRNKTIPLVKVLRRNHAVEEATWESEDQMRTQYPRLF
        D P+  +L E+LSY E+PVQILDRKEQVLRNKTIPL+KVL R+H  EEATWE E QM+  YP LF
Subjt:  DDPILMQLSENLSYEEKPVQILDRKEQVLRNKTIPLVKVLRRNHAVEEATWESEDQMRTQYPRLF

A0A5D3BB91 Reverse transcriptase3.2e-5838.48Show/hide
Query:  QEDIVDQDEGVMARIAALRVRMLRRDPDKDFKIELLRALGATDFSRTADPADAES------------------------------AGEWWESVIARQPEA
        +E++ +Q    +A+     +R  + DP+K +  E L+ALGAT F+ T +P D E+                              A +WW    +R+   
Subjt:  QEDIVDQDEGVMARIAALRVRMLRRDPDKDFKIELLRALGATDFSRTADPADAES------------------------------AGEWWESVIARQPEA

Query:  EKLSWKEFKNLFNEAYYPRCNRDTKRSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTA-SRWQEFGPLVEVAVRVKK
          +SW EFK  F + +YPR  RD K +EF++L QG+MTVAEY+KKY ELSKYAT VI DE +RC+RFE+GLR+EIR+  TA + W +F  LVEVA+RV+K
Subjt:  EKLSWKEFKNLFNEAYYPRCNRDTKRSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTA-SRWQEFGPLVEVAVRVKK

Query:  SLLDKKNQRKVSKNVRCTFSSSTSSLSGRHFRDSSRRFTPEVSGRGSFKPRYRGSQNFRANVNFPQQTTSGSSQYRRPSGSQKSGQQAESGPNYTRYPVP
        SL ++K +R+ SKN+R TFSSS      R  ++ S RF P VS RGSFK +Y GS       +F +  + G +Q      S  S   + +G ++      
Subjt:  SLLDKKNQRKVSKNVRCTFSSSTSSLSGRHFRDSSRRFTPEVSGRGSFKPRYRGSQNFRANVNFPQQTTSGSSQYRRPSGSQKSGQQAESGPNYTRYPVP

Query:  KNCGKSHRGECLWRASIVCYNCGQAGHMKRECPQLWQEGSASQGASSRPMVPGRSDSQAKLVSEGQPNTGNSSGVKSKGQVGRPRGQGKIFAMMQHEAEE
            +S+R       S VCYNC Q GH +R+CP L    +     +S+ ++        +L + G    G SSG K KG VGR R +GK+FAM Q EA +
Subjt:  KNCGKSHRGECLWRASIVCYNCGQAGHMKRECPQLWQEGSASQGASSRPMVPGRSDSQAKLVSEGQPNTGNSSGVKSKGQVGRPRGQGKIFAMMQHEAEE

Query:  LPDLVTDRKLEPLPSELVVATPGGISLIADSVYR
         P++VT        S  V+  PG  S I +SVYR
Subjt:  LPDLVTDRKLEPLPSELVVATPGGISLIADSVYR

A0A5D3BTP3 Reverse transcriptase1.4e-5837.3Show/hide
Query:  DPDKDFKIELLRALGATDFSRTADPADAE------------------------------SAGEWWESVIARQPEAEKLSWKEFKNLFNEAYYPRCNRDTK
        D +K + IE L+ LGAT F  + DPADAE                               A  WW+S+IAR+ +A  L W+ F+ +F E YYP    + K
Subjt:  DPDKDFKIELLRALGATDFSRTADPADAE------------------------------SAGEWWESVIARQPEAEKLSWKEFKNLFNEAYYPRCNRDTK

Query:  RSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTA-SRWQEFGPLVEVAVRVKKSLLDKKNQRKVSKNVRCTFSSSTSS
        R EFL+L Q S++VA+Y++KY ELS+YA  ++  E DRC RFE GLR EIR+  TA ++W  F  LVE A+RVK+S++++K+  ++S+ V     S+TS 
Subjt:  RSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTA-SRWQEFGPLVEVAVRVKKSLLDKKNQRKVSKNVRCTFSSSTSS

Query:  LSGRHFRDSSRRFTP--EVSGRGSFKPRYRGS--QNFRANVNFPQQTTSGSSQYRRPSGSQKSGQQAESGPNYTRYPVPKNCGKSHRGECLWRASIVCYN
        + GR      RRFTP   VSG   FK R  G   +   +   + +Q+   SSQ        ++GQ  ES  + ++     +CGKSH+G C+  A  VCY 
Subjt:  LSGRHFRDSSRRFTP--EVSGRGSFKPRYRGS--QNFRANVNFPQQTTSGSSQYRRPSGSQKSGQQAESGPNYTRYPVPKNCGKSHRGECLWRASIVCYN

Query:  CGQAGHMKRECPQLWQEGSASQGASSRPMVPGRSDSQAKLVSEGQPNTGNSSGVKSKGQVGRPRGQGKIFAMMQHEAEELPDLVTD--------------
        CG+ GH KR+CPQL       QG  S  +   R  + A     G+     +SG + KG VGRPR QGK++AM Q EAE+ PD++T+              
Subjt:  CGQAGHMKRECPQLWQEGSASQGASSRPMVPGRSDSQAKLVSEGQPNTGNSSGVKSKGQVGRPRGQGKIFAMMQHEAEELPDLVTD--------------

Query:  -----------------RKLEPLPSELVVATPGGISLIADSVYRD
                         R LEPLP ELV+ TP G  L+   V  D
Subjt:  -----------------RKLEPLPSELVVATPGGISLIADSVYRD

A0A5D3BTP3 Reverse transcriptase9.5e-0272.73Show/hide
Query:  MQLSENLSYEEKPVQILDRKEQVLRNKTIPLVK
        ++L E+LSY E+ VQILDRKEQVLRNKTI L+K
Subjt:  MQLSENLSYEEKPVQILDRKEQVLRNKTIPLVK

A0A5D3BTP3 Reverse transcriptase1.4e-5837.3Show/hide
Query:  DPDKDFKIELLRALGATDFSRTADPADAE------------------------------SAGEWWESVIARQPEAEKLSWKEFKNLFNEAYYPRCNRDTK
        D +K + IE L+ LGAT F  + DPADAE                               A  WW+S+IAR+ +A  L W+ F+ +F E YYP    + K
Subjt:  DPDKDFKIELLRALGATDFSRTADPADAE------------------------------SAGEWWESVIARQPEAEKLSWKEFKNLFNEAYYPRCNRDTK

Query:  RSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTA-SRWQEFGPLVEVAVRVKKSLLDKKNQRKVSKNVRCTFSSSTSS
        R EFL+L Q S++VA+Y++KY ELS+YA  ++  E DRC RFE GLR EIR+  TA ++W  F  LVE A+RVK+S++++K+  ++S+ V     S+TS 
Subjt:  RSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTA-SRWQEFGPLVEVAVRVKKSLLDKKNQRKVSKNVRCTFSSSTSS

Query:  LSGRHFRDSSRRFTP--EVSGRGSFKPRYRGS--QNFRANVNFPQQTTSGSSQYRRPSGSQKSGQQAESGPNYTRYPVPKNCGKSHRGECLWRASIVCYN
        + GR      RRFTP   VSG   FK R  G   +   +   + +Q+   SSQ        ++GQ  ES  + ++     +CGKSH+G C+  A  VCY 
Subjt:  LSGRHFRDSSRRFTP--EVSGRGSFKPRYRGS--QNFRANVNFPQQTTSGSSQYRRPSGSQKSGQQAESGPNYTRYPVPKNCGKSHRGECLWRASIVCYN

Query:  CGQAGHMKRECPQLWQEGSASQGASSRPMVPGRSDSQAKLVSEGQPNTGNSSGVKSKGQVGRPRGQGKIFAMMQHEAEELPDLVTD--------------
        CG+ GH KR+CPQL       QG  S  +   R  + A     G+     +SG + KG VGRPR QGK++AM Q EAE+ PD++T+              
Subjt:  CGQAGHMKRECPQLWQEGSASQGASSRPMVPGRSDSQAKLVSEGQPNTGNSSGVKSKGQVGRPRGQGKIFAMMQHEAEELPDLVTD--------------

Query:  -----------------RKLEPLPSELVVATPGGISLIADSVYRD
                         R LEPLP ELV+ TP G  L+   V  D
Subjt:  -----------------RKLEPLPSELVVATPGGISLIADSVYRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAGACGTAGTTGGTGAGTCTAGCCACCGTCCTTTAGATTCACAGGAGGATATAGTTGATCAGGATGAAGGTGTAATGGCAAGAATTGCTGCATTGCGAGTAAG
AATGTTGAGGAGGGATCCCGATAAAGACTTTAAGATCGAGCTACTCAGAGCCTTAGGGGCTACTGATTTCTCTAGGACGGCAGATCCAGCTGACGCGGAATCAGCTGGTG
AGTGGTGGGAGTCAGTTATAGCGAGACAACCAGAAGCTGAAAAATTAAGCTGGAAAGAATTCAAAAACTTGTTTAATGAAGCATACTACCCACGATGCAACAGAGATACA
AAAAGAAGTGAGTTCTTGAAGCTAGTACAGGGGTCGATGACGGTAGCAGAATATCAGAAAAAATATGTAGAACTTTCAAAGTATGCCACCACTGTCATTGAAGATGAGAT
TGATCGATGTAGACGGTTTGAGGATGGATTGCGTAAGGAGATTCGAAGTTGTACTACTGCATCTAGGTGGCAGGAATTTGGACCCTTGGTGGAAGTTGCAGTAAGGGTTA
AGAAGAGTTTGTTGGACAAGAAAAATCAGAGGAAAGTGTCAAAGAATGTGCGTTGCACTTTTTCTAGCTCTACGAGTTCTTTGAGTGGTAGACATTTTCGAGATAGTAGC
AGGAGATTTACGCCTGAAGTGTCGGGTCGAGGGAGTTTTAAACCTAGATATCGAGGATCACAAAACTTTAGAGCGAATGTAAATTTTCCTCAACAGACTACAAGTGGCTC
GAGTCAGTATAGAAGACCTTCAGGTAGTCAGAAATCCGGGCAACAAGCGGAGTCTGGTCCTAATTATACTAGATATCCTGTACCCAAGAATTGTGGTAAGTCGCACAGGG
GTGAATGCCTTTGGAGGGCGAGTATCGTTTGTTATAATTGTGGGCAAGCAGGTCATATGAAAAGAGAATGTCCTCAGTTGTGGCAGGAAGGTAGTGCGTCCCAAGGAGCT
TCCTCAAGACCGATGGTACCGGGACGTTCAGATTCACAAGCAAAACTCGTGAGTGAGGGGCAACCAAATACAGGAAATTCTAGTGGCGTTAAGTCGAAGGGTCAGGTAGG
CAGACCACGTGGTCAGGGAAAGATATTTGCGATGATGCAGCATGAGGCGGAAGAACTGCCAGATTTAGTTACAGATAGAAAGTTAGAACCCTTACCTAGTGAATTGGTGG
TAGCTACACCGGGTGGTATATCTTTGATAGCAGACAGTGTGTATCGTGATTTCATGATTGATTTGGGTGATAGGCTGTTTAATGTAAGGCCTACTTTGATTGATAGAATT
GTAACAGCTCAGCTTGATGATCCAATACTGATGCAGTTAAGTGAGAATTTGTCTTATGAAGAGAAGCCAGTGCAAATTTTAGATAGAAAAGAACAGGTATTGCGAAACAA
GACTATTCCGTTAGTTAAAGTCTTGCGGAGGAATCATGCAGTAGAAGAGGCAACATGGGAAAGTGAGGATCAGATGCGTACTCAGTACCCTCGTCTATTTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAAGACGTAGTTGGTGAGTCTAGCCACCGTCCTTTAGATTCACAGGAGGATATAGTTGATCAGGATGAAGGTGTAATGGCAAGAATTGCTGCATTGCGAGTAAG
AATGTTGAGGAGGGATCCCGATAAAGACTTTAAGATCGAGCTACTCAGAGCCTTAGGGGCTACTGATTTCTCTAGGACGGCAGATCCAGCTGACGCGGAATCAGCTGGTG
AGTGGTGGGAGTCAGTTATAGCGAGACAACCAGAAGCTGAAAAATTAAGCTGGAAAGAATTCAAAAACTTGTTTAATGAAGCATACTACCCACGATGCAACAGAGATACA
AAAAGAAGTGAGTTCTTGAAGCTAGTACAGGGGTCGATGACGGTAGCAGAATATCAGAAAAAATATGTAGAACTTTCAAAGTATGCCACCACTGTCATTGAAGATGAGAT
TGATCGATGTAGACGGTTTGAGGATGGATTGCGTAAGGAGATTCGAAGTTGTACTACTGCATCTAGGTGGCAGGAATTTGGACCCTTGGTGGAAGTTGCAGTAAGGGTTA
AGAAGAGTTTGTTGGACAAGAAAAATCAGAGGAAAGTGTCAAAGAATGTGCGTTGCACTTTTTCTAGCTCTACGAGTTCTTTGAGTGGTAGACATTTTCGAGATAGTAGC
AGGAGATTTACGCCTGAAGTGTCGGGTCGAGGGAGTTTTAAACCTAGATATCGAGGATCACAAAACTTTAGAGCGAATGTAAATTTTCCTCAACAGACTACAAGTGGCTC
GAGTCAGTATAGAAGACCTTCAGGTAGTCAGAAATCCGGGCAACAAGCGGAGTCTGGTCCTAATTATACTAGATATCCTGTACCCAAGAATTGTGGTAAGTCGCACAGGG
GTGAATGCCTTTGGAGGGCGAGTATCGTTTGTTATAATTGTGGGCAAGCAGGTCATATGAAAAGAGAATGTCCTCAGTTGTGGCAGGAAGGTAGTGCGTCCCAAGGAGCT
TCCTCAAGACCGATGGTACCGGGACGTTCAGATTCACAAGCAAAACTCGTGAGTGAGGGGCAACCAAATACAGGAAATTCTAGTGGCGTTAAGTCGAAGGGTCAGGTAGG
CAGACCACGTGGTCAGGGAAAGATATTTGCGATGATGCAGCATGAGGCGGAAGAACTGCCAGATTTAGTTACAGATAGAAAGTTAGAACCCTTACCTAGTGAATTGGTGG
TAGCTACACCGGGTGGTATATCTTTGATAGCAGACAGTGTGTATCGTGATTTCATGATTGATTTGGGTGATAGGCTGTTTAATGTAAGGCCTACTTTGATTGATAGAATT
GTAACAGCTCAGCTTGATGATCCAATACTGATGCAGTTAAGTGAGAATTTGTCTTATGAAGAGAAGCCAGTGCAAATTTTAGATAGAAAAGAACAGGTATTGCGAAACAA
GACTATTCCGTTAGTTAAAGTCTTGCGGAGGAATCATGCAGTAGAAGAGGCAACATGGGAAAGTGAGGATCAGATGCGTACTCAGTACCCTCGTCTATTTCCTTAA
Protein sequenceShow/hide protein sequence
MAEDVVGESSHRPLDSQEDIVDQDEGVMARIAALRVRMLRRDPDKDFKIELLRALGATDFSRTADPADAESAGEWWESVIARQPEAEKLSWKEFKNLFNEAYYPRCNRDT
KRSEFLKLVQGSMTVAEYQKKYVELSKYATTVIEDEIDRCRRFEDGLRKEIRSCTTASRWQEFGPLVEVAVRVKKSLLDKKNQRKVSKNVRCTFSSSTSSLSGRHFRDSS
RRFTPEVSGRGSFKPRYRGSQNFRANVNFPQQTTSGSSQYRRPSGSQKSGQQAESGPNYTRYPVPKNCGKSHRGECLWRASIVCYNCGQAGHMKRECPQLWQEGSASQGA
SSRPMVPGRSDSQAKLVSEGQPNTGNSSGVKSKGQVGRPRGQGKIFAMMQHEAEELPDLVTDRKLEPLPSELVVATPGGISLIADSVYRDFMIDLGDRLFNVRPTLIDRI
VTAQLDDPILMQLSENLSYEEKPVQILDRKEQVLRNKTIPLVKVLRRNHAVEEATWESEDQMRTQYPRLFP