; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g16700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g16700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionpathogenesis-related protein 1-like
Genome locationchr4:12373854..12375246
RNA-Seq ExpressionMoc04g16700
SyntenyMoc04g16700
Gene Ontology termsGO:0005615 - extracellular space (cellular component)
InterPro domainsIPR001283 - Cysteine-rich secretory protein-related
IPR035940 - CAP superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7849478.1 hypothetical protein BT93_L0744 [Corymbia citriodora subsp. variegata]1.9e-1362.12Show/hide
Query:  SAPALLLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC
        + P+ LL L+ L+  L  LS+AQDSPQDYV  HNAAR+ VGV PI WDE VA YAR YAN+H  DC
Subjt:  SAPALLLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC

KAF8008394.1 hypothetical protein BT93_K2160 [Corymbia citriodora subsp. variegata]3.2e-1362.12Show/hide
Query:  SAPALLLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC
        + P+ LL L+ L   L  LS+AQDSPQDYV  HNAAR+ VGV PI WDE VA YAR YAN+H  DC
Subjt:  SAPALLLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC

KCW44744.1 hypothetical protein EUGRSUZ_L01705 [Eucalyptus grandis]1.1e-1361.19Show/hide
Query:  RSAPALLLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC
        RS P  ++ L+ L   L SLS+AQDSPQDYV  HNAAR+ VGV PI WDE+VA YAR YA +H +DC
Subjt:  RSAPALLLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC

KCW63503.1 hypothetical protein EUGRSUZ_G01133 [Eucalyptus grandis]1.1e-1361.19Show/hide
Query:  RSAPALLLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC
        RS P  ++ L+ L   L SLS+AQDSPQDYV  HNAAR+ VGV PI WDE+VA YAR YA +H +DC
Subjt:  RSAPALLLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC

XP_038887491.1 pathogenesis-related protein 1-like [Benincasa hispida]2.9e-1466.67Show/hide
Query:  LLLSLLC-LDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDCYCI
        L LSL C L F +   SLAQDSPQDY++ HNAARA VGV P+QWDE+VA +ARQYANQ I DC  I
Subjt:  LLLSLLC-LDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDCYCI

TrEMBL top hitse value%identityAlignment
A0A058ZTI6 SCP domain-containing protein5.4e-1461.19Show/hide
Query:  RSAPALLLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC
        RS P  ++ L+ L   L SLS+AQDSPQDYV  HNAAR+ VGV PI WDE+VA YAR YA +H +DC
Subjt:  RSAPALLLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC

A0A059BBM5 SCP domain-containing protein5.4e-1461.19Show/hide
Query:  RSAPALLLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC
        RS P  ++ L+ L   L SLS+AQDSPQDYV  HNAAR+ VGV PI WDE+VA YAR YA +H +DC
Subjt:  RSAPALLLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC

A0A5A7SJR7 Pathogenesis-related protein PRB1-2-like3.5e-1364.06Show/hide
Query:  ALLLSLLC-LDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC
        +L LSL C L F +   SLAQDSP+D+V+ HNAARA VGV P+ WDE+VA +ARQYANQ I DC
Subjt:  ALLLSLLC-LDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC

A0A6J1GJH3 pathogenesis-related protein 1-like2.0e-1360.94Show/hide
Query:  LLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDCYCI
        LL    L   +   S AQDSPQDYVD HN ARA VGV P+QWDEKVA++ARQY N+HI DC  +
Subjt:  LLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDCYCI

A0A6J1GKL8 pathogenesis-related protein PRB1-3-like2.0e-1360.94Show/hide
Query:  LLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDCYCI
        LL    L   +   S AQDSPQDYVD HN ARA VGV P+QWDEKVA++ARQY N+HI DC  +
Subjt:  LLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDCYCI

SwissProt top hitse value%identityAlignment
P08299 Pathogenesis-related protein 1A5.4e-1153.23Show/hide
Query:  LLLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC
        LL+S L L   ++    AQ+S QDY+D HN ARA VGVEP+ WD++VA YA+ YA+Q   DC
Subjt:  LLLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC

P09042 Pathogenesis-related protein 1C2.0e-1052.46Show/hide
Query:  LLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC
        L+S L L   ++    AQ+S QDY+D HN ARA VGVEP+ WD++VA YA+ YA+Q   DC
Subjt:  LLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC

P33154 Pathogenesis-related protein 12.0e-1064Show/hide
Query:  SLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDCYCI
        S AQDSPQDY+ VHN AR  VGV P+QWDE+VA YAR YA Q   +C  I
Subjt:  SLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDCYCI

P35793 Pathogenesis-related protein PRB1-31.6e-1050Show/hide
Query:  LLLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC
        ++L  L +   + +LS AQ+SPQDYV  HNAARA VGV  + W  K+  +A+ YANQ I DC
Subjt:  LLLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC

Q41359 Pathogenesis-related protein PR-1 type5.4e-1158.82Show/hide
Query:  LASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC
        +   S+AQ+SPQDYVD HNAAR+ V V P+ WDE VA +ARQYA     DC
Subjt:  LASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC

Arabidopsis top hitse value%identityAlignment
AT2G14580.1 basic pathogenesis-related protein 14.2e-1164.44Show/hide
Query:  AQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC
        AQDS QDYV+ HN AR+ +GV P+QWDE +A YAR YANQ   DC
Subjt:  AQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC

AT2G14610.1 pathogenesis-related gene 11.5e-1164Show/hide
Query:  SLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDCYCI
        S AQDSPQDY+ VHN AR  VGV P+QWDE+VA YAR YA Q   +C  I
Subjt:  SLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDCYCI

AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein8.0e-1053.19Show/hide
Query:  SLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC
        SLA+D  Q +++ HN AR  VG++P+ WD++VA YA  YANQ I DC
Subjt:  SLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC

AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein5.9e-1371.11Show/hide
Query:  AQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC
        AQDSPQD++ VHN ARA VGV P++WDEKVA YAR YANQ   DC
Subjt:  AQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC

AT5G26130.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein2.3e-0944.78Show/hide
Query:  RSAPALLLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC
        +S   L+LS++ L    A    AQD PQDY+D HN AR  VGV P++W      YA  YA Q   DC
Subjt:  RSAPALLLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCATGCCCAGCTCGGACCGCCGAGATCACCGCCGTTAGCATTGATGGATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCAAGGTTCGACCTACCGGGAAGCTCG
ATCCGCCCCAGCTCTCCTTCTCTCTCTTTTGTGTCTTGACTTTCACCTTGCTTCCCTTTCTCTTGCTCAAGACTCACCTCAAGACTATGTCGATGTCCACAATGCTGCCC
GTGCCCCAGTTGGCGTTGAACCCATCCAGTGGGACGAGAAGGTGGCAGACTATGCAAGGCAATATGCCAACCAACACATTAAGGACTGTTATTGCATTCTGATGGACCTT
ATGGGGAGAATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTCATGCCCAGCTCGGACCGCCGAGATCACCGCCGTTAGCATTGATGGATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCAAGGTTCGACCTACCGGGAAGCTCG
ATCCGCCCCAGCTCTCCTTCTCTCTCTTTTGTGTCTTGACTTTCACCTTGCTTCCCTTTCTCTTGCTCAAGACTCACCTCAAGACTATGTCGATGTCCACAATGCTGCCC
GTGCCCCAGTTGGCGTTGAACCCATCCAGTGGGACGAGAAGGTGGCAGACTATGCAAGGCAATATGCCAACCAACACATTAAGGACTGTTATTGCATTCTGATGGACCTT
ATGGGGAGAATCTAG
Protein sequenceShow/hide protein sequence
MSHAQLGPPRSPPLALMDAKYEGRGEPGQGSTYREARSAPALLLSLLCLDFHLASLSLAQDSPQDYVDVHNAARAPVGVEPIQWDEKVADYARQYANQHIKDCYCILMDL
MGRI