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Moc04g16880 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g16880
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr4:12478867..12481355
RNA-Seq ExpressionMoc04g16880
SyntenyMoc04g16880
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156328.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia]1.6e-2087.32Show/hide
Query:  MHSELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFSMMGHGYFTLSRIGRFAWLRFCG
        MHSELEC EVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFSM+GHG FTLS  G  A L FCG
Subjt:  MHSELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFSMMGHGYFTLSRIGRFAWLRFCG

XP_022156880.1 uncharacterized protein LOC111023714 [Momordica charantia]2.0e-1070.91Show/hide
Query:  ELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFSMMGHGYFTL
        EL+  EVEL V+DVSA+LARLSVEP+LRQR+I AQ+ DPSL+KGFSM+G G F+L
Subjt:  ELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFSMMGHGYFTL

XP_022157022.1 uncharacterized protein LOC111023849 [Momordica charantia]1.5e-1393.88Show/hide
Query:  MHSELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFS
        MHSELE LEVELTVDDVSA LARLS+EPSLRQRIIVAQKEDPSLAKGFS
Subjt:  MHSELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFS

XP_022157823.1 uncharacterized protein LOC111024441 [Momordica charantia]9.9e-1889.83Show/hide
Query:  MHSELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFSMMGHGYFTLS
        +HSELE LEVELT+DDV ALLARLSVEPSLRQRIIVAQKEDPSLAKGFSM+GHG FTLS
Subjt:  MHSELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFSMMGHGYFTLS

XP_022159308.1 uncharacterized protein LOC111025717 [Momordica charantia]2.4e-0864.91Show/hide
Query:  ELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFSMMGHGYFTLSR
        EL+  EVEL V DVSA+LARLSVE +LRQ++I A+K DPSL+KGF ++G G F+LSR
Subjt:  ELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFSMMGHGYFTLSR

TrEMBL top hitse value%identityAlignment
A0A6J1DQB9 Reverse transcriptase7.9e-2187.32Show/hide
Query:  MHSELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFSMMGHGYFTLSRIGRFAWLRFCG
        MHSELEC EVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFSM+GHG FTLS  G  A L FCG
Subjt:  MHSELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFSMMGHGYFTLSRIGRFAWLRFCG

A0A6J1DRK1 uncharacterized protein LOC1110237149.7e-1170.91Show/hide
Query:  ELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFSMMGHGYFTL
        EL+  EVEL V+DVSA+LARLSVEP+LRQR+I AQ+ DPSL+KGFSM+G G F+L
Subjt:  ELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFSMMGHGYFTL

A0A6J1DTG8 Reverse transcriptase7.2e-1493.88Show/hide
Query:  MHSELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFS
        MHSELE LEVELTVDDVSA LARLS+EPSLRQRIIVAQKEDPSLAKGFS
Subjt:  MHSELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFS

A0A6J1DUE8 uncharacterized protein LOC1110244414.8e-1889.83Show/hide
Query:  MHSELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFSMMGHGYFTLS
        +HSELE LEVELT+DDV ALLARLSVEPSLRQRIIVAQKEDPSLAKGFSM+GHG FTLS
Subjt:  MHSELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFSMMGHGYFTLS

A0A6J1DYG1 uncharacterized protein LOC1110257171.2e-0864.91Show/hide
Query:  ELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFSMMGHGYFTLSR
        EL+  EVEL V DVSA+LARLSVE +LRQ++I A+K DPSL+KGF ++G G F+LSR
Subjt:  ELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFSMMGHGYFTLSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAGCGAGTTGGAATGCTTGGAGGTGGAGCTGACGGTGGATGATGTCTCCGCGTTGTTGGCTCGACTCTCAGTGGAACCTAGCCTGAGACAGAGGATCATTGTTGC
CCAAAAGGAAGACCCTAGCTTGGCCAAAGGCTTTAGTATGATGGGCCATGGATATTTCACTCTTTCGAGAATCGGACGATTTGCTTGGTTAAGGTTTTGTGGAGAAACCA
CCAAGTGGAAGAAGCTACTTGGGAGCGGGAGGACGATATCGAGGCGAGATACCCTGAACTGTTGGAACAGTAAACTTTCGGGGACGAAAGTTTTTGAAGGAGGGAAGTCT
GTAACGCCCCGAGTCCCTCAGCCGTCACCCACCCCTCTTCTTTTTCTTGATTCTCCAGCGACCACACCTCACGGCGGCGACGGAAACAACGGCGCCTCCTCGAAACAGCA
GCAGCGGCGGCCGGCGACCACGTCCGTAGCGGCAGCAGCGACGGCGCAACTTCGACCCGAGCAGCAGCGGCGACGCGATTCCTCCGGCGACGTGTTCTCCGACGAACGGC
CCAGCGTCCTCCACAAACCCCGGCGATCCGCGGCGAACCTCGACGACCTGTTGCTACGATCCGACGAACAAAAACTCCAGCGGCGGGATTTGTGCGTTATAGCAGCGTTT
AAGACGTTTGGCGGTGACCCACATCCGTTCGAAGCTCGATTTAGGCTACCCACACCTTGGCGAGCTAGATCTAGGTGTGAGGTCGACGTAAAACTTAAGGGCGCGGTTGT
GAGTAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACAGCGAGTTGGAATGCTTGGAGGTGGAGCTGACGGTGGATGATGTCTCCGCGTTGTTGGCTCGACTCTCAGTGGAACCTAGCCTGAGACAGAGGATCATTGTTGC
CCAAAAGGAAGACCCTAGCTTGGCCAAAGGCTTTAGTATGATGGGCCATGGATATTTCACTCTTTCGAGAATCGGACGATTTGCTTGGTTAAGGTTTTGTGGAGAAACCA
CCAAGTGGAAGAAGCTACTTGGGAGCGGGAGGACGATATCGAGGCGAGATACCCTGAACTGTTGGAACAGTAAACTTTCGGGGACGAAAGTTTTTGAAGGAGGGAAGTCT
GTAACGCCCCGAGTCCCTCAGCCGTCACCCACCCCTCTTCTTTTTCTTGATTCTCCAGCGACCACACCTCACGGCGGCGACGGAAACAACGGCGCCTCCTCGAAACAGCA
GCAGCGGCGGCCGGCGACCACGTCCGTAGCGGCAGCAGCGACGGCGCAACTTCGACCCGAGCAGCAGCGGCGACGCGATTCCTCCGGCGACGTGTTCTCCGACGAACGGC
CCAGCGTCCTCCACAAACCCCGGCGATCCGCGGCGAACCTCGACGACCTGTTGCTACGATCCGACGAACAAAAACTCCAGCGGCGGGATTTGTGCGTTATAGCAGCGTTT
AAGACGTTTGGCGGTGACCCACATCCGTTCGAAGCTCGATTTAGGCTACCCACACCTTGGCGAGCTAGATCTAGGTGTGAGGTCGACGTAAAACTTAAGGGCGCGGTTGT
GAGTAAGTAG
Protein sequenceShow/hide protein sequence
MHSELECLEVELTVDDVSALLARLSVEPSLRQRIIVAQKEDPSLAKGFSMMGHGYFTLSRIGRFAWLRFCGETTKWKKLLGSGRTISRRDTLNCWNSKLSGTKVFEGGKS
VTPRVPQPSPTPLLFLDSPATTPHGGDGNNGASSKQQQRRPATTSVAAAATAQLRPEQQRRRDSSGDVFSDERPSVLHKPRRSAANLDDLLLRSDEQKLQRRDLCVIAAF
KTFGGDPHPFEARFRLPTPWRARSRCEVDVKLKGAVVSK