; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g16930 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g16930
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr4:12508124..12509609
RNA-Seq ExpressionMoc04g16930
SyntenyMoc04g16930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036997.1 gypsy/ty3 element polyprotein [Cucumis melo var. makuwa]3.1e-6432.31Show/hide
Query:  MTVKELETRCEATEREIVDIKGAIATLCVKFDEQQKASGKTQLMLEAFMAEIIGGPTSSVSQLGESSMLKNKQTAEMIGGNQNHD--------QGYDRSK
        MT K +E R +A+E+EI  IK  +  + V     +K   K   ML     +    P SS    G S+  +  +T +++ G++  +         G DR K
Subjt:  MTVKELETRCEATEREIVDIKGAIATLCVKFDEQQKASGKTQLMLEAFMAEIIGGPTSSVSQLGESSMLKNKQTAEMIGGNQNHD--------QGYDRSK

Query:  FKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLT----------------------------
        FKK+EMP+F G DPD W++ AE YF++H L ++EKL +++VS +G  L W+RW E R +F SW+ L++RL T                            
Subjt:  FKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLT----------------------------

Query:  -FEALSAPLSHLSD---------GLDPVIRAEVLATEPISLEQMMRRSQLIEDIATAVQEAGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVA
         FE LSAPL  +++         GLDPVIR EV A   + LE MM  ++L E+    +  A  G   +  +    A KP  K +ET +T+  TL  +   
Subjt:  -FEALSAPLSHLSD---------GLDPVIRAEVLATEPISLEQMMRRSQLIEDIATAVQEAGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVA

Query:  TAAVVPMAGTST-------ARRETAYKRLTEEEYRKRKEE--VDKCMEEKGKAVMCR-------------------------------------LNTIVG
          A V  A  S         RR+T ++R T+ E + R+++    +C E   K   C+                                     LN++VG
Subjt:  TAAVVPMAGTST-------ARRETAYKRLTEEEYRKRKEE--VDKCMEEKGKAVMCR-------------------------------------LNTIVG

Query:  LTTPGMIKVRGTVQGREVVVLLDWGATNNFM------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQS
        LT PG  K++GTV+ +E+V+++D GAT+NF+                                    + + LP +++VEDFLP+EL ++D++LGM+WLQ 
Subjt:  LTTPGMIKVRGTVQGREVVVLLDWGATNNFM------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQS

Query:  MGKMKTDWPALTMSFIRGDKWIMLRGDPTLARLEVSLKRLTRAWQETDQGSLWN
         G M  DW ALTM+F+ GD  ++L+GDP+L R+E+SLK L + WQ  DQG L N
Subjt:  MGKMKTDWPALTMSFIRGDKWIMLRGDPTLARLEVSLKRLTRAWQETDQGSLWN

TYK10423.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]3.1e-6432.31Show/hide
Query:  MTVKELETRCEATEREIVDIKGAIATLCVKFDEQQKASGKTQLMLEAFMAEIIGGPTSSVSQLGESSMLKNKQTAEMIGGNQNHD--------QGYDRSK
        MT K +E R +A+E+EI  IK  +  + V     +K   K   ML     +    P SS    G S+  +  +T +++ G++  +         G DR K
Subjt:  MTVKELETRCEATEREIVDIKGAIATLCVKFDEQQKASGKTQLMLEAFMAEIIGGPTSSVSQLGESSMLKNKQTAEMIGGNQNHD--------QGYDRSK

Query:  FKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLT----------------------------
        FKK+EMP+F G DPD W++ AE YF++H L ++EKL +++VS +G  L W+RW E R +F SW+ L++RL T                            
Subjt:  FKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLT----------------------------

Query:  -FEALSAPLSHLSD---------GLDPVIRAEVLATEPISLEQMMRRSQLIEDIATAVQEAGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVA
         FE LSAPL  +++         GLDPVIR EV A   + LE MM  ++L E+    +  A  G   +  +    A KP  K +ET +T+  TL  +   
Subjt:  -FEALSAPLSHLSD---------GLDPVIRAEVLATEPISLEQMMRRSQLIEDIATAVQEAGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVA

Query:  TAAVVPMAGTST-------ARRETAYKRLTEEEYRKRKEE--VDKCMEEKGKAVMCR-------------------------------------LNTIVG
          A V  A  S         RR+T ++R T+ E + R+++    +C E   K   C+                                     LN++VG
Subjt:  TAAVVPMAGTST-------ARRETAYKRLTEEEYRKRKEE--VDKCMEEKGKAVMCR-------------------------------------LNTIVG

Query:  LTTPGMIKVRGTVQGREVVVLLDWGATNNFM------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQS
        LT PG  K++GTV+ +E+V+++D GAT+NF+                                    + + LP +++VEDFLP+EL ++D++LGM+WLQ 
Subjt:  LTTPGMIKVRGTVQGREVVVLLDWGATNNFM------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQS

Query:  MGKMKTDWPALTMSFIRGDKWIMLRGDPTLARLEVSLKRLTRAWQETDQGSLWN
         G M  DW ALTM+F+ GD  ++L+GDP+L R+E+SLK L + WQ  DQG L N
Subjt:  MGKMKTDWPALTMSFIRGDKWIMLRGDPTLARLEVSLKRLTRAWQETDQGSLWN

TYK17386.1 gypsy/ty3 element polyprotein [Cucumis melo var. makuwa]3.1e-6432.31Show/hide
Query:  MTVKELETRCEATEREIVDIKGAIATLCVKFDEQQKASGKTQLMLEAFMAEIIGGPTSSVSQLGESSMLKNKQTAEMIGGNQNHD--------QGYDRSK
        MT K +E R +A+E+EI  IK  +  + V     +K   K   ML     +    P SS    G S+  +  +T +++ G++  +         G DR K
Subjt:  MTVKELETRCEATEREIVDIKGAIATLCVKFDEQQKASGKTQLMLEAFMAEIIGGPTSSVSQLGESSMLKNKQTAEMIGGNQNHD--------QGYDRSK

Query:  FKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLT----------------------------
        FKK+EMP+F G DPD W++ AE YF++H L ++EKL +++VS +G  L W+RW E R +F SW+ L++RL T                            
Subjt:  FKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLT----------------------------

Query:  -FEALSAPLSHLSD---------GLDPVIRAEVLATEPISLEQMMRRSQLIEDIATAVQEAGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVA
         FE LSAPL  +++         GLDPVIR EV A   + LE MM  ++L E+    +  A  G   +  +    A KP  K +ET +T+  TL  +   
Subjt:  -FEALSAPLSHLSD---------GLDPVIRAEVLATEPISLEQMMRRSQLIEDIATAVQEAGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVA

Query:  TAAVVPMAGTST-------ARRETAYKRLTEEEYRKRKEE--VDKCMEEKGKAVMCR-------------------------------------LNTIVG
          A V  A  S         RR+T ++R T+ E + R+++    +C E   K   C+                                     LN++VG
Subjt:  TAAVVPMAGTST-------ARRETAYKRLTEEEYRKRKEE--VDKCMEEKGKAVMCR-------------------------------------LNTIVG

Query:  LTTPGMIKVRGTVQGREVVVLLDWGATNNFM------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQS
        LT PG  K++GTV+ +E+V+++D GAT+NF+                                    + + LP +++VEDFLP+EL ++D++LGM+WLQ 
Subjt:  LTTPGMIKVRGTVQGREVVVLLDWGATNNFM------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQS

Query:  MGKMKTDWPALTMSFIRGDKWIMLRGDPTLARLEVSLKRLTRAWQETDQGSLWN
         G M  DW ALTM+F+ GD  ++L+GDP+L R+E+SLK L + WQ  DQG L N
Subjt:  MGKMKTDWPALTMSFIRGDKWIMLRGDPTLARLEVSLKRLTRAWQETDQGSLWN

TYK21209.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]3.1e-6432.31Show/hide
Query:  MTVKELETRCEATEREIVDIKGAIATLCVKFDEQQKASGKTQLMLEAFMAEIIGGPTSSVSQLGESSMLKNKQTAEMIGGNQNHD--------QGYDRSK
        MT K +E R +A+E+EI  IK  +  + V     +K   K   ML     +    P SS    G S+  +  +T +++ G++  +         G DR K
Subjt:  MTVKELETRCEATEREIVDIKGAIATLCVKFDEQQKASGKTQLMLEAFMAEIIGGPTSSVSQLGESSMLKNKQTAEMIGGNQNHD--------QGYDRSK

Query:  FKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLT----------------------------
        FKK+EMP+F G DPD W++ AE YF++H L ++EKL +++VS +G  L W+RW E R +F SW+ L++RL T                            
Subjt:  FKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLT----------------------------

Query:  -FEALSAPLSHLSD---------GLDPVIRAEVLATEPISLEQMMRRSQLIEDIATAVQEAGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVA
         FE LSAPL  +++         GLDPVIR EV A   + LE MM  ++L E+    +  A  G   +  +    A KP  K +ET +T+  TL  +   
Subjt:  -FEALSAPLSHLSD---------GLDPVIRAEVLATEPISLEQMMRRSQLIEDIATAVQEAGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVA

Query:  TAAVVPMAGTST-------ARRETAYKRLTEEEYRKRKEE--VDKCMEEKGKAVMCR-------------------------------------LNTIVG
          A V  A  S         RR+T ++R T+ E + R+++    +C E   K   C+                                     LN++VG
Subjt:  TAAVVPMAGTST-------ARRETAYKRLTEEEYRKRKEE--VDKCMEEKGKAVMCR-------------------------------------LNTIVG

Query:  LTTPGMIKVRGTVQGREVVVLLDWGATNNFM------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQS
        LT PG  K++GTV+ +E+V+++D GAT+NF+                                    + + LP +++VEDFLP+EL ++D++LGM+WLQ 
Subjt:  LTTPGMIKVRGTVQGREVVVLLDWGATNNFM------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQS

Query:  MGKMKTDWPALTMSFIRGDKWIMLRGDPTLARLEVSLKRLTRAWQETDQGSLWN
         G M  DW ALTM+F+ GD  ++L+GDP+L R+E+SLK L + WQ  DQG L N
Subjt:  MGKMKTDWPALTMSFIRGDKWIMLRGDPTLARLEVSLKRLTRAWQETDQGSLWN

XP_022154744.1 uncharacterized protein LOC111021922 [Momordica charantia]3.0e-6735.7Show/hide
Query:  KELETRCEATEREIVDIKGAIATLCVKFDEQQKAS-----------GKTQLMLEAFMAEIIGG--PTSSVSQLGESSMLKN--KQTAEMIGGNQN---HD
        K+LE RCE+TE+E+  IK  +  +  + +EQ+K S            +TQ  L+ FM E+  G  P  + ++ G S++ +   ++ +E  G         
Subjt:  KELETRCEATEREIVDIKGAIATLCVKFDEQQKAS-----------GKTQLMLEAFMAEIIGG--PTSSVSQLGESSMLKN--KQTAEMIGGNQN---HD

Query:  QGYDRSKFKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLTFEALSAPLSHLSDGLDPVIRA
         G +R+KFKKVEMP+FTG DP+SWLF AERYFEI+ L++EEK+ V+++SF+G A+ WY W E R  F  W NL+ R+    + S   + LS  L   I+ 
Subjt:  QGYDRSKFKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLTFEALSAPLSHLSDGLDPVIRA

Query:  EVLATEPISLEQMMRRSQLIEDIATAVQE---AGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVATAAVVPMAGTSTARRETAYKRLTEEEYR
        E   TE    +     S  + DIA  V E      G+  +  R  A   K   K  ET  TRT TL+ K   TA           R+E   K+LTE EY+
Subjt:  EVLATEPISLEQMMRRSQLIEDIATAVQE---AGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVATAAVVPMAGTSTARRETAYKRLTEEEYR

Query:  KRKE---------------------------------EVDK---CMEEKGK-------AVMCRLNTIVGLTTPGMIKVRGTVQGREVVVLLDWGATNNFM
        +RK+                                 E+D+    M  +G+            LNT+VG +TPG +K+RG ++ +EVV+L+D GAT+NF+
Subjt:  KRKE---------------------------------EVDK---CMEEKGK-------AVMCRLNTIVGLTTPGMIKVRGTVQGREVVVLLDWGATNNFM

Query:  ------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQSMGKMKTDWPALTMSFIRGDKWIMLRGDPTLA
                                            +IL LPE+T+ E+FLP+EL +LDV+LGM+WL + G M+ DW ALTMSF  G   I+L+GDPTL 
Subjt:  ------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQSMGKMKTDWPALTMSFIRGDKWIMLRGDPTLA

Query:  RLEVSLKRLTRAWQETDQGSL
        R+EV+LK+L R W+  DQG L
Subjt:  RLEVSLKRLTRAWQETDQGSL

TrEMBL top hitse value%identityAlignment
A0A5A7T606 Gypsy/ty3 element polyprotein1.5e-6432.31Show/hide
Query:  MTVKELETRCEATEREIVDIKGAIATLCVKFDEQQKASGKTQLMLEAFMAEIIGGPTSSVSQLGESSMLKNKQTAEMIGGNQNHD--------QGYDRSK
        MT K +E R +A+E+EI  IK  +  + V     +K   K   ML     +    P SS    G S+  +  +T +++ G++  +         G DR K
Subjt:  MTVKELETRCEATEREIVDIKGAIATLCVKFDEQQKASGKTQLMLEAFMAEIIGGPTSSVSQLGESSMLKNKQTAEMIGGNQNHD--------QGYDRSK

Query:  FKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLT----------------------------
        FKK+EMP+F G DPD W++ AE YF++H L ++EKL +++VS +G  L W+RW E R +F SW+ L++RL T                            
Subjt:  FKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLT----------------------------

Query:  -FEALSAPLSHLSD---------GLDPVIRAEVLATEPISLEQMMRRSQLIEDIATAVQEAGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVA
         FE LSAPL  +++         GLDPVIR EV A   + LE MM  ++L E+    +  A  G   +  +    A KP  K +ET +T+  TL  +   
Subjt:  -FEALSAPLSHLSD---------GLDPVIRAEVLATEPISLEQMMRRSQLIEDIATAVQEAGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVA

Query:  TAAVVPMAGTST-------ARRETAYKRLTEEEYRKRKEE--VDKCMEEKGKAVMCR-------------------------------------LNTIVG
          A V  A  S         RR+T ++R T+ E + R+++    +C E   K   C+                                     LN++VG
Subjt:  TAAVVPMAGTST-------ARRETAYKRLTEEEYRKRKEE--VDKCMEEKGKAVMCR-------------------------------------LNTIVG

Query:  LTTPGMIKVRGTVQGREVVVLLDWGATNNFM------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQS
        LT PG  K++GTV+ +E+V+++D GAT+NF+                                    + + LP +++VEDFLP+EL ++D++LGM+WLQ 
Subjt:  LTTPGMIKVRGTVQGREVVVLLDWGATNNFM------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQS

Query:  MGKMKTDWPALTMSFIRGDKWIMLRGDPTLARLEVSLKRLTRAWQETDQGSLWN
         G M  DW ALTM+F+ GD  ++L+GDP+L R+E+SLK L + WQ  DQG L N
Subjt:  MGKMKTDWPALTMSFIRGDKWIMLRGDPTLARLEVSLKRLTRAWQETDQGSLWN

A0A5D3BD16 Ty3/gypsy retrotransposon protein1.5e-6432.31Show/hide
Query:  MTVKELETRCEATEREIVDIKGAIATLCVKFDEQQKASGKTQLMLEAFMAEIIGGPTSSVSQLGESSMLKNKQTAEMIGGNQNHD--------QGYDRSK
        MT K +E R +A+E+EI  IK  +  + V     +K   K   ML     +    P SS    G S+  +  +T +++ G++  +         G DR K
Subjt:  MTVKELETRCEATEREIVDIKGAIATLCVKFDEQQKASGKTQLMLEAFMAEIIGGPTSSVSQLGESSMLKNKQTAEMIGGNQNHD--------QGYDRSK

Query:  FKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLT----------------------------
        FKK+EMP+F G DPD W++ AE YF++H L ++EKL +++VS +G  L W+RW E R +F SW+ L++RL T                            
Subjt:  FKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLT----------------------------

Query:  -FEALSAPLSHLSD---------GLDPVIRAEVLATEPISLEQMMRRSQLIEDIATAVQEAGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVA
         FE LSAPL  +++         GLDPVIR EV A   + LE MM  ++L E+    +  A  G   +  +    A KP  K +ET +T+  TL  +   
Subjt:  -FEALSAPLSHLSD---------GLDPVIRAEVLATEPISLEQMMRRSQLIEDIATAVQEAGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVA

Query:  TAAVVPMAGTST-------ARRETAYKRLTEEEYRKRKEE--VDKCMEEKGKAVMCR-------------------------------------LNTIVG
          A V  A  S         RR+T ++R T+ E + R+++    +C E   K   C+                                     LN++VG
Subjt:  TAAVVPMAGTST-------ARRETAYKRLTEEEYRKRKEE--VDKCMEEKGKAVMCR-------------------------------------LNTIVG

Query:  LTTPGMIKVRGTVQGREVVVLLDWGATNNFM------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQS
        LT PG  K++GTV+ +E+V+++D GAT+NF+                                    + + LP +++VEDFLP+EL ++D++LGM+WLQ 
Subjt:  LTTPGMIKVRGTVQGREVVVLLDWGATNNFM------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQS

Query:  MGKMKTDWPALTMSFIRGDKWIMLRGDPTLARLEVSLKRLTRAWQETDQGSLWN
         G M  DW ALTM+F+ GD  ++L+GDP+L R+E+SLK L + WQ  DQG L N
Subjt:  MGKMKTDWPALTMSFIRGDKWIMLRGDPTLARLEVSLKRLTRAWQETDQGSLWN

A0A5D3CEX8 Ty3/gypsy retrotransposon protein1.5e-6432.31Show/hide
Query:  MTVKELETRCEATEREIVDIKGAIATLCVKFDEQQKASGKTQLMLEAFMAEIIGGPTSSVSQLGESSMLKNKQTAEMIGGNQNHD--------QGYDRSK
        MT K +E R +A+E+EI  IK  +  + V     +K   K   ML     +    P SS    G S+  +  +T +++ G++  +         G DR K
Subjt:  MTVKELETRCEATEREIVDIKGAIATLCVKFDEQQKASGKTQLMLEAFMAEIIGGPTSSVSQLGESSMLKNKQTAEMIGGNQNHD--------QGYDRSK

Query:  FKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLT----------------------------
        FKK+EMP+F G DPD W++ AE YF++H L ++EKL +++VS +G  L W+RW E R +F SW+ L++RL T                            
Subjt:  FKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLT----------------------------

Query:  -FEALSAPLSHLSD---------GLDPVIRAEVLATEPISLEQMMRRSQLIEDIATAVQEAGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVA
         FE LSAPL  +++         GLDPVIR EV A   + LE MM  ++L E+    +  A  G   +  +    A KP  K +ET +T+  TL  +   
Subjt:  -FEALSAPLSHLSD---------GLDPVIRAEVLATEPISLEQMMRRSQLIEDIATAVQEAGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVA

Query:  TAAVVPMAGTST-------ARRETAYKRLTEEEYRKRKEE--VDKCMEEKGKAVMCR-------------------------------------LNTIVG
          A V  A  S         RR+T ++R T+ E + R+++    +C E   K   C+                                     LN++VG
Subjt:  TAAVVPMAGTST-------ARRETAYKRLTEEEYRKRKEE--VDKCMEEKGKAVMCR-------------------------------------LNTIVG

Query:  LTTPGMIKVRGTVQGREVVVLLDWGATNNFM------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQS
        LT PG  K++GTV+ +E+V+++D GAT+NF+                                    + + LP +++VEDFLP+EL ++D++LGM+WLQ 
Subjt:  LTTPGMIKVRGTVQGREVVVLLDWGATNNFM------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQS

Query:  MGKMKTDWPALTMSFIRGDKWIMLRGDPTLARLEVSLKRLTRAWQETDQGSLWN
         G M  DW ALTM+F+ GD  ++L+GDP+L R+E+SLK L + WQ  DQG L N
Subjt:  MGKMKTDWPALTMSFIRGDKWIMLRGDPTLARLEVSLKRLTRAWQETDQGSLWN

A0A5D3DRT3 Ty3/gypsy retrotransposon protein1.5e-6432.31Show/hide
Query:  MTVKELETRCEATEREIVDIKGAIATLCVKFDEQQKASGKTQLMLEAFMAEIIGGPTSSVSQLGESSMLKNKQTAEMIGGNQNHD--------QGYDRSK
        MT K +E R +A+E+EI  IK  +  + V     +K   K   ML     +    P SS    G S+  +  +T +++ G++  +         G DR K
Subjt:  MTVKELETRCEATEREIVDIKGAIATLCVKFDEQQKASGKTQLMLEAFMAEIIGGPTSSVSQLGESSMLKNKQTAEMIGGNQNHD--------QGYDRSK

Query:  FKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLT----------------------------
        FKK+EMP+F G DPD W++ AE YF++H L ++EKL +++VS +G  L W+RW E R +F SW+ L++RL T                            
Subjt:  FKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLT----------------------------

Query:  -FEALSAPLSHLSD---------GLDPVIRAEVLATEPISLEQMMRRSQLIEDIATAVQEAGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVA
         FE LSAPL  +++         GLDPVIR EV A   + LE MM  ++L E+    +  A  G   +  +    A KP  K +ET +T+  TL  +   
Subjt:  -FEALSAPLSHLSD---------GLDPVIRAEVLATEPISLEQMMRRSQLIEDIATAVQEAGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVA

Query:  TAAVVPMAGTST-------ARRETAYKRLTEEEYRKRKEE--VDKCMEEKGKAVMCR-------------------------------------LNTIVG
          A V  A  S         RR+T ++R T+ E + R+++    +C E   K   C+                                     LN++VG
Subjt:  TAAVVPMAGTST-------ARRETAYKRLTEEEYRKRKEE--VDKCMEEKGKAVMCR-------------------------------------LNTIVG

Query:  LTTPGMIKVRGTVQGREVVVLLDWGATNNFM------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQS
        LT PG  K++GTV+ +E+V+++D GAT+NF+                                    + + LP +++VEDFLP+EL ++D++LGM+WLQ 
Subjt:  LTTPGMIKVRGTVQGREVVVLLDWGATNNFM------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQS

Query:  MGKMKTDWPALTMSFIRGDKWIMLRGDPTLARLEVSLKRLTRAWQETDQGSLWN
         G M  DW ALTM+F+ GD  ++L+GDP+L R+E+SLK L + WQ  DQG L N
Subjt:  MGKMKTDWPALTMSFIRGDKWIMLRGDPTLARLEVSLKRLTRAWQETDQGSLWN

A0A6J1DN22 Reverse transcriptase1.4e-6735.7Show/hide
Query:  KELETRCEATEREIVDIKGAIATLCVKFDEQQKAS-----------GKTQLMLEAFMAEIIGG--PTSSVSQLGESSMLKN--KQTAEMIGGNQN---HD
        K+LE RCE+TE+E+  IK  +  +  + +EQ+K S            +TQ  L+ FM E+  G  P  + ++ G S++ +   ++ +E  G         
Subjt:  KELETRCEATEREIVDIKGAIATLCVKFDEQQKAS-----------GKTQLMLEAFMAEIIGG--PTSSVSQLGESSMLKN--KQTAEMIGGNQN---HD

Query:  QGYDRSKFKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLTFEALSAPLSHLSDGLDPVIRA
         G +R+KFKKVEMP+FTG DP+SWLF AERYFEI+ L++EEK+ V+++SF+G A+ WY W E R  F  W NL+ R+    + S   + LS  L   I+ 
Subjt:  QGYDRSKFKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLTFEALSAPLSHLSDGLDPVIRA

Query:  EVLATEPISLEQMMRRSQLIEDIATAVQE---AGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVATAAVVPMAGTSTARRETAYKRLTEEEYR
        E   TE    +     S  + DIA  V E      G+  +  R  A   K   K  ET  TRT TL+ K   TA           R+E   K+LTE EY+
Subjt:  EVLATEPISLEQMMRRSQLIEDIATAVQE---AGSGTVDRATRVNAVAGKPTGKPLETTATRTGTLTTKPVATAAVVPMAGTSTARRETAYKRLTEEEYR

Query:  KRKE---------------------------------EVDK---CMEEKGK-------AVMCRLNTIVGLTTPGMIKVRGTVQGREVVVLLDWGATNNFM
        +RK+                                 E+D+    M  +G+            LNT+VG +TPG +K+RG ++ +EVV+L+D GAT+NF+
Subjt:  KRKE---------------------------------EVDK---CMEEKGK-------AVMCRLNTIVGLTTPGMIKVRGTVQGREVVVLLDWGATNNFM

Query:  ------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQSMGKMKTDWPALTMSFIRGDKWIMLRGDPTLA
                                            +IL LPE+T+ E+FLP+EL +LDV+LGM+WL + G M+ DW ALTMSF  G   I+L+GDPTL 
Subjt:  ------------------------------------VILELPEVTVVEDFLPIELNDLDVILGMKWLQSMGKMKTDWPALTMSFIRGDKWIMLRGDPTLA

Query:  RLEVSLKRLTRAWQETDQGSL
        R+EV+LK+L R W+  DQG L
Subjt:  RLEVSLKRLTRAWQETDQGSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67020.1 unknown protein6.7e-0934.25Show/hide
Query:  SKFKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLL
        S  +++EMP+F G     W    ER+F + +  D +KL +  +S +GVAL W+       +F  W +  QRLL
Subjt:  SKFKKVEMPIFTGLDPDSWLFHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLL

AT3G29750.1 Eukaryotic aspartyl protease family protein1.8e-0627.91Show/hide
Query:  IVGLTTPGMIKVRGTVQGREVVVLLDWGATNNFMVI-----LELP-------------------------------EVTVVEDFLPIEL--NDLDVILGM
        ++ LT    ++  G +   +VVV +D GAT+NF+++     L+LP                               EV + E+FL ++L   D+DVILG 
Subjt:  IVGLTTPGMIKVRGTVQGREVVVLLDWGATNNFMVI-----LELP-------------------------------EVTVVEDFLPIEL--NDLDVILGM

Query:  KWLQSMGKMKTDWPALTMSFIRGDKWIML
        +WL  +G+   +W     SF    +WI L
Subjt:  KWLQSMGKMKTDWPALTMSFIRGDKWIML


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGTGAAGGAACTTGAAACACGGTGTGAAGCGACTGAGAGGGAAATCGTCGACATTAAGGGGGCAATCGCAACCTTGTGTGTGAAGTTCGATGAACAACAGAAGGC
AAGCGGCAAAACACAGCTGATGCTGGAAGCATTCATGGCCGAAATTATCGGAGGGCCGACTTCGTCGGTTTCGCAACTGGGAGAATCGTCGATGTTGAAGAACAAACAGA
CGGCGGAAATGATCGGAGGGAACCAGAACCACGACCAAGGATATGACCGAAGTAAGTTCAAAAAAGTCGAAATGCCTATATTCACTGGTTTGGACCCCGATTCTTGGTTA
TTTCATGCTGAAAGGTACTTTGAGATTCATAAACTCACTGACGAAGAGAAGTTAGTGGTCTCGGTGGTTAGCTTCGATGGGGTAGCCTTAGCGTGGTATCGTTGGCATGA
GCCAAGAGATAAGTTCACTAGTTGGGAGAATTTGAGACAACGATTGCTAACCTTCGAAGCCCTCTCGGCGCCGTTGTCTCACCTTTCCGATGGCCTGGACCCAGTCATTA
GAGCGGAAGTTTTGGCCACTGAGCCTATCAGTCTAGAGCAGATGATGCGCAGGTCCCAACTAATTGAGGATATCGCCACAGCGGTCCAAGAAGCAGGAAGTGGAACAGTT
GATCGGGCCACGAGGGTAAATGCCGTTGCTGGTAAACCAACGGGCAAACCTCTAGAAACGACAGCCACACGCACCGGCACTTTGACGACTAAGCCAGTCGCCACCGCAGC
GGTAGTACCGATGGCAGGGACATCGACGGCGAGGAGAGAAACTGCCTATAAGCGCTTGACGGAGGAGGAATATCGAAAGAGGAAAGAGGAAGTGGACAAGTGCATGGAGG
AAAAAGGGAAGGCGGTGATGTGTCGCCTCAATACGATTGTCGGACTAACGACGCCAGGCATGATTAAAGTAAGGGGAACAGTGCAAGGGCGCGAGGTGGTGGTGCTGTTG
GATTGGGGAGCTACTAACAATTTTATGGTGATATTAGAACTACCAGAAGTGACGGTTGTGGAAGACTTCCTACCCATCGAGTTGAATGACCTAGATGTAATCTTGGGAAT
GAAGTGGCTTCAATCAATGGGGAAGATGAAAACGGACTGGCCAGCCTTGACCATGTCGTTTATCAGAGGAGACAAATGGATCATGCTGAGGGGTGACCCTACATTGGCAC
GATTGGAAGTTTCACTCAAGAGACTTACTCGTGCTTGGCAAGAAACTGATCAGGGTTCCTTGTGGAACTGTGGGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGGTGAAGGAACTTGAAACACGGTGTGAAGCGACTGAGAGGGAAATCGTCGACATTAAGGGGGCAATCGCAACCTTGTGTGTGAAGTTCGATGAACAACAGAAGGC
AAGCGGCAAAACACAGCTGATGCTGGAAGCATTCATGGCCGAAATTATCGGAGGGCCGACTTCGTCGGTTTCGCAACTGGGAGAATCGTCGATGTTGAAGAACAAACAGA
CGGCGGAAATGATCGGAGGGAACCAGAACCACGACCAAGGATATGACCGAAGTAAGTTCAAAAAAGTCGAAATGCCTATATTCACTGGTTTGGACCCCGATTCTTGGTTA
TTTCATGCTGAAAGGTACTTTGAGATTCATAAACTCACTGACGAAGAGAAGTTAGTGGTCTCGGTGGTTAGCTTCGATGGGGTAGCCTTAGCGTGGTATCGTTGGCATGA
GCCAAGAGATAAGTTCACTAGTTGGGAGAATTTGAGACAACGATTGCTAACCTTCGAAGCCCTCTCGGCGCCGTTGTCTCACCTTTCCGATGGCCTGGACCCAGTCATTA
GAGCGGAAGTTTTGGCCACTGAGCCTATCAGTCTAGAGCAGATGATGCGCAGGTCCCAACTAATTGAGGATATCGCCACAGCGGTCCAAGAAGCAGGAAGTGGAACAGTT
GATCGGGCCACGAGGGTAAATGCCGTTGCTGGTAAACCAACGGGCAAACCTCTAGAAACGACAGCCACACGCACCGGCACTTTGACGACTAAGCCAGTCGCCACCGCAGC
GGTAGTACCGATGGCAGGGACATCGACGGCGAGGAGAGAAACTGCCTATAAGCGCTTGACGGAGGAGGAATATCGAAAGAGGAAAGAGGAAGTGGACAAGTGCATGGAGG
AAAAAGGGAAGGCGGTGATGTGTCGCCTCAATACGATTGTCGGACTAACGACGCCAGGCATGATTAAAGTAAGGGGAACAGTGCAAGGGCGCGAGGTGGTGGTGCTGTTG
GATTGGGGAGCTACTAACAATTTTATGGTGATATTAGAACTACCAGAAGTGACGGTTGTGGAAGACTTCCTACCCATCGAGTTGAATGACCTAGATGTAATCTTGGGAAT
GAAGTGGCTTCAATCAATGGGGAAGATGAAAACGGACTGGCCAGCCTTGACCATGTCGTTTATCAGAGGAGACAAATGGATCATGCTGAGGGGTGACCCTACATTGGCAC
GATTGGAAGTTTCACTCAAGAGACTTACTCGTGCTTGGCAAGAAACTGATCAGGGTTCCTTGTGGAACTGTGGGCCTTGA
Protein sequenceShow/hide protein sequence
MTVKELETRCEATEREIVDIKGAIATLCVKFDEQQKASGKTQLMLEAFMAEIIGGPTSSVSQLGESSMLKNKQTAEMIGGNQNHDQGYDRSKFKKVEMPIFTGLDPDSWL
FHAERYFEIHKLTDEEKLVVSVVSFDGVALAWYRWHEPRDKFTSWENLRQRLLTFEALSAPLSHLSDGLDPVIRAEVLATEPISLEQMMRRSQLIEDIATAVQEAGSGTV
DRATRVNAVAGKPTGKPLETTATRTGTLTTKPVATAAVVPMAGTSTARRETAYKRLTEEEYRKRKEEVDKCMEEKGKAVMCRLNTIVGLTTPGMIKVRGTVQGREVVVLL
DWGATNNFMVILELPEVTVVEDFLPIELNDLDVILGMKWLQSMGKMKTDWPALTMSFIRGDKWIMLRGDPTLARLEVSLKRLTRAWQETDQGSLWNCGP