; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g17320 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g17320
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr4:12756071..12766338
RNA-Seq ExpressionMoc04g17320
SyntenyMoc04g17320
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032583.1 reverse transcriptase [Cucumis melo var. makuwa]6.3e-15834.89Show/hide
Query:  MGALKFLSAIQKRVNGPKGTSKKGLMFVDATINSKPAKSTMVDSGATHNFISEQEARRLELTIEKDTGKMKVVNSEALPIVGVSKRVSLKLGTWTGSVNF
        MGALKFLS++QK+V       ++GLM+VD  IN KP KSTMVDSGATHNFI+E EA+RL L  EKD G+MK VNS ALPI+G+ KR  ++LG W+G V+F
Subjt:  MGALKFLSAIQKRVNGPKGTSKKGLMFVDATINSKPAKSTMVDSGATHNFISEQEARRLELTIEKDTGKMKVVNSEALPIVGVSKRVSLKLGTWTGSVNF

Query:  VVVGMDDFDDVLGMEYLIEHKVIPMRLAKCMIVTSNNPTVVTASIKQPGGIRMISALQLEKGLNREEPTFMAILMVEQTVEARDVPPEIQVVMREY----
        +VV MDDFD VLGME+L+EH+VIPM LAKC+++T   P+VV   ++QP G++MISA+QL+KGL+R+EPTFMAI +         VP EI  V+ +Y    
Subjt:  VVVGMDDFDDVLGMEYLIEHKVIPMRLAKCMIVTSNNPTVVTASIKQPGGIRMISALQLEKGLNREEPTFMAILMVEQTVEARDVPPEIQVVMREY----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------WRQYLLGSYFVVKTDNSAICHFFNQP
                                                                                  WRQYLLGS FVVKTDNSA CHFF QP
Subjt:  --------------------------------------------------------------------------WRQYLLGSYFVVKTDNSAICHFFNQP

Query:  KLTSKQARWQELLAEFD---------------------------------SNKVDGSIRDLIREYLQRNPSARTVVELAKTGKTRQFWVEGDLLFTRGNR
        KLTSKQARWQE LAEFD                                  +++ GS+RD +RE+LQ++ +A+ V+ LAK GKTRQFWVE DLL T+GNR
Subjt:  KLTSKQARWQELLAEFD---------------------------------SNKVDGSIRDLIREYLQRNPSARTVVELAKTGKTRQFWVEGDLLFTRGNR

Query:  L--------------------------WQQTYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHK
        L                          WQ+TYALLKKGYFWPNMR+DVMQYTKTCL CQQDKVE+ K+AGLL+PLP PTRP ESV +DFI+HLPKVG+ +
Subjt:  L--------------------------WQQTYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHK

Query:  AILIVIDRFFNYGEF----RRASLAT---------------GMADLQGPSGLNFFLFWVQ----AGTSPRVI----------------------------
        AIL++IDRF  Y  F    ++ S  T                 + +    G     FW +     GTS  +                             
Subjt:  AILIVIDRFFNYGEF----RRASLAT---------------GMADLQGPSGLNFFLFWVQ----AGTSPRVI----------------------------

Query:  -------------------THKPMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLI
                           T    G +P  + +     LPH++DHP+ GK+PQA NFTKEW+QT +IARAYLEKASK MKKWAD+KR PLEFR GD+VLI
Subjt:  -------------------THKPMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLI

Query:  KLRPEQIHFRGRKDQKLVRKYEGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPYHLNLEDDERNTVVRPGIDFKLKEDKEAEEILAERTRK
        KLRPEQ+ FRGRKDQ+LVRKYEGPVEV+KKVGN SY+V LPTWMKI+PVIHVSNLKPYH + ED +RN V RP ID   KEDK+ EEILAER R+
Subjt:  KLRPEQIHFRGRKDQKLVRKYEGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPYHLNLEDDERNTVVRPGIDFKLKEDKEAEEILAERTRK

KAA0032849.1 reverse transcriptase [Cucumis melo var. makuwa]6.3e-15835.07Show/hide
Query:  MGALKFLSAIQKRVNGPKGTSKKGLMFVDATINSKPAKSTMVDSGATHNFISEQEARRLELTIEKDTGKMKVVNSEALPIVGVSKRVSLKLGTWTGSVNF
        MGALKFLS++QK+V       ++GLM+VD  IN KP KSTMVDSGATHNFI+E EA+RL L  EKD G+MK VNS ALPI+G+ KR  ++LG W+G V+F
Subjt:  MGALKFLSAIQKRVNGPKGTSKKGLMFVDATINSKPAKSTMVDSGATHNFISEQEARRLELTIEKDTGKMKVVNSEALPIVGVSKRVSLKLGTWTGSVNF

Query:  VVVGMDDFDDVLGMEYLIEHKVIPMRLAKCMIVTSNNPTVVTASIKQPGGIRMISALQLEKGLNREEPTFMAILMVEQTVEARDVPPEIQVVMREY----
        VVV MDDFD VLGME+L+EH+VIPM LAKC+++T   P+VV   ++QP G++MISA+QL+KGL+R+EPTFMAI +         VP EI  V+ +Y    
Subjt:  VVVGMDDFDDVLGMEYLIEHKVIPMRLAKCMIVTSNNPTVVTASIKQPGGIRMISALQLEKGLNREEPTFMAILMVEQTVEARDVPPEIQVVMREY----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------WRQYLLGSYFVVKTDNSAICHFFNQP
                                                                                  WRQYLLGS FVVKTDNSA CHFF QP
Subjt:  --------------------------------------------------------------------------WRQYLLGSYFVVKTDNSAICHFFNQP

Query:  KLTSKQARWQELLAEFD---------------------------------SNKVDGSIRDLIREYLQRNPSARTVVELAKTGKTRQFWVEGDLLFTRGNR
        KLTSKQARWQE LAEFD                                  +++ GS+RD +RE+LQ++ +A+ V+ LAK GKTRQFWVE DLL T+GNR
Subjt:  KLTSKQARWQELLAEFD---------------------------------SNKVDGSIRDLIREYLQRNPSARTVVELAKTGKTRQFWVEGDLLFTRGNR

Query:  L--------------------------WQQTYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHK
        L                          WQ+TYALLKKGYFWPNMR+DVMQYTKTCL CQQDKVE+ K+AGLL+PLP PTRP ESV +DFI+HLPKVG+ +
Subjt:  L--------------------------WQQTYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHK

Query:  AILIVIDRFFNYGEF----RRASLAT---------------GMADLQGPSGLNFFLFWVQ----AGTSPRVI----------------------------
        AIL++IDRF  Y  F    ++ S  T                 + +    G     FW +     GTS  +                             
Subjt:  AILIVIDRFFNYGEF----RRASLAT---------------GMADLQGPSGLNFFLFWVQ----AGTSPRVI----------------------------

Query:  -------------------THKPMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLI
                           T    G +P  + +     LPH++DHP+ GK+PQA NFTKEW+QT +IARAYLEKASK MKKWAD+KR PLEFR GD+VLI
Subjt:  -------------------THKPMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLI

Query:  KLRPEQIHFRGRKDQKLVRKYEGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPYHLNLEDDERNTVVRPGIDFKLKEDKEAEEILAERTRK
        KLRPEQ+ FRGRKDQ+LVRKYEGPVEV+KKVGN SY+V LPTWMKI+PVIHVSNLKPYH + ED +RN V RP ID   KEDK+ EEILAER RK
Subjt:  KLRPEQIHFRGRKDQKLVRKYEGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPYHLNLEDDERNTVVRPGIDFKLKEDKEAEEILAERTRK

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]8.2e-15834.98Show/hide
Query:  MGALKFLSAIQKRVNGPKGTSKKGLMFVDATINSKPAKSTMVDSGATHNFISEQEARRLELTIEKDTGKMKVVNSEALPIVGVSKRVSLKLGTWTGSVNF
        MGALKFLS++QK+V       ++GLM+VD  IN KP KSTMVDSGATHNFI+E EA+RL L  EKD G+MK VNS ALPI+G+ KR  ++LG W+G V+F
Subjt:  MGALKFLSAIQKRVNGPKGTSKKGLMFVDATINSKPAKSTMVDSGATHNFISEQEARRLELTIEKDTGKMKVVNSEALPIVGVSKRVSLKLGTWTGSVNF

Query:  VVVGMDDFDDVLGMEYLIEHKVIPMRLAKCMIVTSNNPTVVTASIKQPGGIRMISALQLEKGLNREEPTFMAILMVEQTVEARDVPPEIQVVMREY----
        VVV MDDFD VLGME+L+EH+VIPM LAKC+++T   P+VV   ++QP G++MISA+QL+KGL+R+EPTFMAI +         VP EI  V+ +Y    
Subjt:  VVVGMDDFDDVLGMEYLIEHKVIPMRLAKCMIVTSNNPTVVTASIKQPGGIRMISALQLEKGLNREEPTFMAILMVEQTVEARDVPPEIQVVMREY----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------WRQYLLGSYFVVKTDNSAICHFFNQP
                                                                                  WRQYLLGS FVVKTDNSA CHFF QP
Subjt:  --------------------------------------------------------------------------WRQYLLGSYFVVKTDNSAICHFFNQP

Query:  KLTSKQARWQELLAEFD---------------------------------SNKVDGSIRDLIREYLQRNPSARTVVELAKTGKTRQFWVEGDLLFTRGNR
        KLTSKQARWQE LAEFD                                  +++ GS+RD +RE+LQ++ +A+ V+ LAK GKTRQFWVE DLL T+GNR
Subjt:  KLTSKQARWQELLAEFD---------------------------------SNKVDGSIRDLIREYLQRNPSARTVVELAKTGKTRQFWVEGDLLFTRGNR

Query:  L--------------------------WQQTYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHK
        L                          WQ+TYALLKKGYFWPNMR+DVMQYTKTCL CQQDKVE+ K+AGLL+PLP PTRP ESV +DFI+HLPKVG+ +
Subjt:  L--------------------------WQQTYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHK

Query:  AILIVIDRFFNYGEF----RRASLAT---------------GMADLQGPSGLNFFLFWVQ----AGTSPRVI----------------------------
        AIL++IDRF  Y  F    ++ S  T                 + +    G     FW +     GTS  +                             
Subjt:  AILIVIDRFFNYGEF----RRASLAT---------------GMADLQGPSGLNFFLFWVQ----AGTSPRVI----------------------------

Query:  -------------------THKPMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLI
                           T    G +P  + +     LPH++DHP+ GK+PQA NFTKEW+QT +IARAYLEKASK MKKWAD+KR PLEFR GD+VLI
Subjt:  -------------------THKPMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLI

Query:  KLRPEQIHFRGRKDQKLVRKYEGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPYHLNLEDDERNTVVRPGIDFKLKEDKEAEEILAERTRK
        KLRPEQ+ FRGRKDQ+LVRKYEGPVEV+KKVGN SY+V LPTWMKI+PVIHVSNLKPYH + ED +RN V RP ID   KEDK+ EEILAER R+
Subjt:  KLRPEQIHFRGRKDQKLVRKYEGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPYHLNLEDDERNTVVRPGIDFKLKEDKEAEEILAERTRK

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]8.2e-15834.98Show/hide
Query:  MGALKFLSAIQKRVNGPKGTSKKGLMFVDATINSKPAKSTMVDSGATHNFISEQEARRLELTIEKDTGKMKVVNSEALPIVGVSKRVSLKLGTWTGSVNF
        MGALKFLS++QK+V       ++GLM+VD  IN KP KSTMVDSGATHNFI+E EA+RL L  EKD G+MK VNS ALPI+G+ KR  ++LG W+G V+F
Subjt:  MGALKFLSAIQKRVNGPKGTSKKGLMFVDATINSKPAKSTMVDSGATHNFISEQEARRLELTIEKDTGKMKVVNSEALPIVGVSKRVSLKLGTWTGSVNF

Query:  VVVGMDDFDDVLGMEYLIEHKVIPMRLAKCMIVTSNNPTVVTASIKQPGGIRMISALQLEKGLNREEPTFMAILMVEQTVEARDVPPEIQVVMREY----
        VVV MDDFD VLGME+L+EH+VIPM LAKC+++T   P+VV   ++QP G++MISA+QL+KGL+R+EPTFMAI +         VP EI  V+ +Y    
Subjt:  VVVGMDDFDDVLGMEYLIEHKVIPMRLAKCMIVTSNNPTVVTASIKQPGGIRMISALQLEKGLNREEPTFMAILMVEQTVEARDVPPEIQVVMREY----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------WRQYLLGSYFVVKTDNSAICHFFNQP
                                                                                  WRQYLLGS FVVKTDNSA CHFF QP
Subjt:  --------------------------------------------------------------------------WRQYLLGSYFVVKTDNSAICHFFNQP

Query:  KLTSKQARWQELLAEFD---------------------------------SNKVDGSIRDLIREYLQRNPSARTVVELAKTGKTRQFWVEGDLLFTRGNR
        KLTSKQARWQE LAEFD                                  +++ GS+RD +RE+LQ++ +A+ V+ LAK GKTRQFWVE DLL T+GNR
Subjt:  KLTSKQARWQELLAEFD---------------------------------SNKVDGSIRDLIREYLQRNPSARTVVELAKTGKTRQFWVEGDLLFTRGNR

Query:  L--------------------------WQQTYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHK
        L                          WQ+TYALLKKGYFWPNMR+DVMQYTKTCL CQQDKVE+ K+AGLL+PLP PTRP ESV +DFI+HLPKVG+ +
Subjt:  L--------------------------WQQTYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHK

Query:  AILIVIDRFFNYGEF----RRASLAT---------------GMADLQGPSGLNFFLFWVQ----AGTSPRVI----------------------------
        AIL++IDRF  Y  F    ++ S  T                 + +    G     FW +     GTS  +                             
Subjt:  AILIVIDRFFNYGEF----RRASLAT---------------GMADLQGPSGLNFFLFWVQ----AGTSPRVI----------------------------

Query:  -------------------THKPMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLI
                           T    G +P  + +     LPH++DHP+ GK+PQA NFTKEW+QT +IARAYLEKASK MKKWAD+KR PLEFR GD+VLI
Subjt:  -------------------THKPMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLI

Query:  KLRPEQIHFRGRKDQKLVRKYEGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPYHLNLEDDERNTVVRPGIDFKLKEDKEAEEILAERTRK
        KLRPEQ+ FRGRKDQ+LVRKYEGPVEV+KKVGN SY+V LPTWMKI+PVIHVSNLKPYH + ED +RN V RP ID   KEDK+ EEILAER R+
Subjt:  KLRPEQIHFRGRKDQKLVRKYEGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPYHLNLEDDERNTVVRPGIDFKLKEDKEAEEILAERTRK

TYK28713.1 reverse transcriptase [Cucumis melo var. makuwa]8.2e-15834.98Show/hide
Query:  MGALKFLSAIQKRVNGPKGTSKKGLMFVDATINSKPAKSTMVDSGATHNFISEQEARRLELTIEKDTGKMKVVNSEALPIVGVSKRVSLKLGTWTGSVNF
        MGALKFLS++QK+V       ++GLM+VD  IN KP KSTMVDSGATHNFI+E EA+RL L  EKD G+MK VNS ALPI+G+ KR  ++LG W+G V+F
Subjt:  MGALKFLSAIQKRVNGPKGTSKKGLMFVDATINSKPAKSTMVDSGATHNFISEQEARRLELTIEKDTGKMKVVNSEALPIVGVSKRVSLKLGTWTGSVNF

Query:  VVVGMDDFDDVLGMEYLIEHKVIPMRLAKCMIVTSNNPTVVTASIKQPGGIRMISALQLEKGLNREEPTFMAILMVEQTVEARDVPPEIQVVMREY----
        VVV MDDFD VLGME+L+EH+VIPM LAKC+++T   P+VV   ++QP G++MISA+QL+KGL+R+EPTFMAI +         VP EI  V+ +Y    
Subjt:  VVVGMDDFDDVLGMEYLIEHKVIPMRLAKCMIVTSNNPTVVTASIKQPGGIRMISALQLEKGLNREEPTFMAILMVEQTVEARDVPPEIQVVMREY----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------WRQYLLGSYFVVKTDNSAICHFFNQP
                                                                                  WRQYLLGS FVVKTDNSA CHFF QP
Subjt:  --------------------------------------------------------------------------WRQYLLGSYFVVKTDNSAICHFFNQP

Query:  KLTSKQARWQELLAEFD---------------------------------SNKVDGSIRDLIREYLQRNPSARTVVELAKTGKTRQFWVEGDLLFTRGNR
        KLTSKQARWQE LAEFD                                  +++ GS+RD +RE+LQ++ +A+ V+ LAK GKTRQFWVE DLL T+GNR
Subjt:  KLTSKQARWQELLAEFD---------------------------------SNKVDGSIRDLIREYLQRNPSARTVVELAKTGKTRQFWVEGDLLFTRGNR

Query:  L--------------------------WQQTYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHK
        L                          WQ+TYALLKKGYFWPNMR+DVMQYTKTCL CQQDKVE+ K+AGLL+PLP PTRP ESV +DFI+HLPKVG+ +
Subjt:  L--------------------------WQQTYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHK

Query:  AILIVIDRFFNYGEF----RRASLAT---------------GMADLQGPSGLNFFLFWVQ----AGTSPRVI----------------------------
        AIL++IDRF  Y  F    ++ S  T                 + +    G     FW +     GTS  +                             
Subjt:  AILIVIDRFFNYGEF----RRASLAT---------------GMADLQGPSGLNFFLFWVQ----AGTSPRVI----------------------------

Query:  -------------------THKPMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLI
                           T    G +P  + +     LPH++DHP+ GK+PQA NFTKEW+QT +IARAYLEKASK MKKWAD+KR PLEFR GD+VLI
Subjt:  -------------------THKPMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLI

Query:  KLRPEQIHFRGRKDQKLVRKYEGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPYHLNLEDDERNTVVRPGIDFKLKEDKEAEEILAERTRK
        KLRPEQ+ FRGRKDQ+LVRKYEGPVEV+KKVGN SY+V LPTWMKI+PVIHVSNLKPYH + ED +RN V RP ID   KEDK+ EEILAER R+
Subjt:  KLRPEQIHFRGRKDQKLVRKYEGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPYHLNLEDDERNTVVRPGIDFKLKEDKEAEEILAERTRK

TrEMBL top hitse value%identityAlignment
A0A5A7TU11 Reverse transcriptase4.7e-15135.49Show/hide
Query:  MGALKFLSAIQKRVNGPKGTSKKGLMFVDATINSKPAKSTMVDSGATHNFISEQEARRLELTIEKDTGKMKVVNSEALPIVGVSKRVSLKLGTWTGSVNF
        MGALKFLS++QK+V       ++GLM+VD  IN KP KSTMVDS ATHNFI+E EA+RL L  EKD G+MK VNS ALPI+G+ KR  ++LG W+G V+F
Subjt:  MGALKFLSAIQKRVNGPKGTSKKGLMFVDATINSKPAKSTMVDSGATHNFISEQEARRLELTIEKDTGKMKVVNSEALPIVGVSKRVSLKLGTWTGSVNF

Query:  VVVGMDDFDDVLGMEYLIEHKVIPMRLAKCMIVTSNNPTVVTASIKQPGGIRMISALQLEKGLNREEPTFMAILMVEQTVEARDVPPEIQVVMREY----
        VVV MDDFD VLGME+L+EH+                       ++QP G++MISA+QL+KGL+R+EPTFMAI +         VP EI  V+ +Y    
Subjt:  VVVGMDDFDDVLGMEYLIEHKVIPMRLAKCMIVTSNNPTVVTASIKQPGGIRMISALQLEKGLNREEPTFMAILMVEQTVEARDVPPEIQVVMREY----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------WRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFD-------------------
                                              WRQYLL S FVVKTDNSA CHFF QPKLTSKQARWQE LAEFD                   
Subjt:  --------------------------------------WRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFD-------------------

Query:  --------------SNKVDGSIRDLIREYLQRNPSARTVVELAKTGKTRQFWVEGDLLFTRGNRL--------------------------WQQTYALLK
                       +++ GS+RD +R++LQ++ +A+ V+ LAK GKTRQFWVE DLL T+GNRL                          WQ+TYALLK
Subjt:  --------------SNKVDGSIRDLIREYLQRNPSARTVVELAKTGKTRQFWVEGDLLFTRGNRL--------------------------WQQTYALLK

Query:  KGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHKAILIVIDRFFNYGEF----RRASLAT----------
        KGYFWPNMR+DVMQYTKTCL CQQDKVE+ K+ GLL+PLP PTRP ESV +DFI+HLPKVG+ +AIL++IDRF  Y  F    ++ S  T          
Subjt:  KGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHKAILIVIDRFFNYGEF----RRASLAT----------

Query:  -----GMADLQGPSGLNFFLFWVQ----AGTSPRV-------------------------ITHKPMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFT
               + +    G     FW +     GTS  +                          T    G +P  + +     LPH++DHP+ GKSPQA NFT
Subjt:  -----GMADLQGPSGLNFFLFWVQ----AGTSPRV-------------------------ITHKPMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFT

Query:  KEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLIKLRPEQIHFRGRKDQKLVRKYEGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPY
        KEW+Q  +IARAYLEKASK MKKWAD+KR PLEFR GD+VLIKLRPEQ+ FRGRKDQ+LVRKYEGPVEV+KKVGN SY+VVLPTWMKI+PVIHVSNLKPY
Subjt:  KEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLIKLRPEQIHFRGRKDQKLVRKYEGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPY

Query:  HLNLEDDERNTVVRPGIDFKLKEDKEAEEILAERTRK
        H + ED +RN V RP ID   KEDK+ EEILAER R+
Subjt:  HLNLEDDERNTVVRPGIDFKLKEDKEAEEILAERTRK

A0A5A7UG93 Reverse transcriptase6.6e-13753.92Show/hide
Query:  WRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFD---------------------------------SNKVDGSIRDLIREYLQRNPSART
        WRQYLLGS FVVKTDNSA CHFF QPKLTSKQARWQE LAEFD                                  +++ GS+RD +RE+LQ++ +A+ 
Subjt:  WRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFD---------------------------------SNKVDGSIRDLIREYLQRNPSART

Query:  VVELAKTGKTRQFWVEGDLLFTRGNRL--------------------------WQQTYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEP
        V+ LAKTGKTRQFWVE DLL T+GNRL                          WQ+TYALLKKGYFWPNMR+DVMQYTKTCL CQQDKVE+ K+AGLL+P
Subjt:  VVELAKTGKTRQFWVEGDLLFTRGNRL--------------------------WQQTYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEP

Query:  LPTPTRPQESVLLDFISHLPKVGEHKAILIVIDRFFNYGEF----RRASLAT---------------GMADLQGPSGLNFFLFWVQ----AGTSPRVI--
        LP PTRP ESV +DFI+HLPKVG+ +AIL++IDRF  Y  F    ++ S  T                 + +    G     FW +     GTS  +   
Subjt:  LPTPTRPQESVLLDFISHLPKVGEHKAILIVIDRFFNYGEF----RRASLAT---------------GMADLQGPSGLNFFLFWVQ----AGTSPRVI--

Query:  ---------------------THKPMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKV
                             T    G +P  + +     LPH++DHP+VGK+PQA NFTKEW+QT +IARAYLEKASK MKKWAD+KR PLEFR GD+V
Subjt:  ---------------------THKPMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKV

Query:  LIKLRPEQIHFRGRKDQKLVRKYEGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPYHLNLEDDERNTVVRPGIDFKLKEDKEAEEILAERTRK
        LIKLRPEQ+ FRGRKDQ+LVRKYEGPVEV+KKVGN SY+V L TWMKI+PVIHVSNLKPYH + ED +RN V RP ID   KEDK+ EEILAER R+
Subjt:  LIKLRPEQIHFRGRKDQKLVRKYEGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPYHLNLEDDERNTVVRPGIDFKLKEDKEAEEILAERTRK

A0A5D3BRZ6 Reverse transcriptase4.4e-15734.98Show/hide
Query:  MGALKFLSAIQKRVNGPKGTSKKGLMFVDATINSKPAKSTMVDSGATHNFISEQEARRLELTIEKDTGKMKVVNSEALPIVGVSKRVSLKLGTWTGSVNF
        MGALKFLS++QK+V       ++GLM+VD  IN KP KSTMVDSGATHNFI+E EA+RL L  EKD G+MK VNS ALPI+G+ KR  ++LG W+G V+F
Subjt:  MGALKFLSAIQKRVNGPKGTSKKGLMFVDATINSKPAKSTMVDSGATHNFISEQEARRLELTIEKDTGKMKVVNSEALPIVGVSKRVSLKLGTWTGSVNF

Query:  VVVGMDDFDDVLGMEYLIEHKVIPMRLAKCMIVTSNNPTVVTASIKQPGGIRMISALQLEKGLNREEPTFMAILMVEQTVEARDVPPEIQVVMREY----
        VVV MDDFD VLGME+L+EH+VIPM LAKC+++T   P+VV   ++QP G++MISA+QL+KGL+R+EPTFMAI +         VP EI  V+ +Y    
Subjt:  VVVGMDDFDDVLGMEYLIEHKVIPMRLAKCMIVTSNNPTVVTASIKQPGGIRMISALQLEKGLNREEPTFMAILMVEQTVEARDVPPEIQVVMREY----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------WRQYLLGSYFVVKTDNSAICHFFNQP
                                                                                  WRQYLLGS FVVKTDNSA CHFF QP
Subjt:  --------------------------------------------------------------------------WRQYLLGSYFVVKTDNSAICHFFNQP

Query:  KLTSKQARWQELLAEFD---------------------------------SNKVDGSIRDLIREYLQRNPSARTVVELAKTGKTRQFWVEGDLLFTRGNR
        KLTSKQARWQE LAEFD                                  +++ GS+RD +RE+LQ++ +A+ V+ LAK GKTRQFWVE DLL T+GNR
Subjt:  KLTSKQARWQELLAEFD---------------------------------SNKVDGSIRDLIREYLQRNPSARTVVELAKTGKTRQFWVEGDLLFTRGNR

Query:  L--------------------------WQQTYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHK
        L                          WQ+TYALLKKGYFWPNMR+DVMQYTKTCL CQQDKVE+ K+AGLL+PLP PTRP ESV +DFI+HLPKVG+ +
Subjt:  L--------------------------WQQTYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHK

Query:  AILIVIDRFFNYGEF----RRASLAT---------------GMADLQGPSGLNFFLFWVQ----AGTSPRVI----------------------------
        AIL++IDRF  Y  F    ++ S  T                 + +    G     FW +     GTS  +                             
Subjt:  AILIVIDRFFNYGEF----RRASLAT---------------GMADLQGPSGLNFFLFWVQ----AGTSPRVI----------------------------

Query:  -------------------THKPMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLI
                           T    G +P  + +     LPH++DHP+ GK+PQA NFTKEW+QT +IARAYLEKASK MKKWAD+KR PLEFR GD+VLI
Subjt:  -------------------THKPMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLI

Query:  KLRPEQIHFRGRKDQKLVRKYEGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPYHLNLEDDERNTVVRPGIDFKLKEDKEAEEILAER
        KLRPEQ+ FRGRKDQ+LVRKYEGPVEV+KKVGN SY+V LPTWMKI+PVIHVSNLKPYH + ED +RN V RP ID   KEDK+ EEILAER
Subjt:  KLRPEQIHFRGRKDQKLVRKYEGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPYHLNLEDDERNTVVRPGIDFKLKEDKEAEEILAER

A0A5D3C4R1 Reverse transcriptase4.0e-15834.98Show/hide
Query:  MGALKFLSAIQKRVNGPKGTSKKGLMFVDATINSKPAKSTMVDSGATHNFISEQEARRLELTIEKDTGKMKVVNSEALPIVGVSKRVSLKLGTWTGSVNF
        MGALKFLS++QK+V       ++GLM+VD  IN KP KSTMVDSGATHNFI+E EA+RL L  EKD G+MK VNS ALPI+G+ KR  ++LG W+G V+F
Subjt:  MGALKFLSAIQKRVNGPKGTSKKGLMFVDATINSKPAKSTMVDSGATHNFISEQEARRLELTIEKDTGKMKVVNSEALPIVGVSKRVSLKLGTWTGSVNF

Query:  VVVGMDDFDDVLGMEYLIEHKVIPMRLAKCMIVTSNNPTVVTASIKQPGGIRMISALQLEKGLNREEPTFMAILMVEQTVEARDVPPEIQVVMREY----
        VVV MDDFD VLGME+L+EH+VIPM LAKC+++T   P+VV   ++QP G++MISA+QL+KGL+R+EPTFMAI +         VP EI  V+ +Y    
Subjt:  VVVGMDDFDDVLGMEYLIEHKVIPMRLAKCMIVTSNNPTVVTASIKQPGGIRMISALQLEKGLNREEPTFMAILMVEQTVEARDVPPEIQVVMREY----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------WRQYLLGSYFVVKTDNSAICHFFNQP
                                                                                  WRQYLLGS FVVKTDNSA CHFF QP
Subjt:  --------------------------------------------------------------------------WRQYLLGSYFVVKTDNSAICHFFNQP

Query:  KLTSKQARWQELLAEFD---------------------------------SNKVDGSIRDLIREYLQRNPSARTVVELAKTGKTRQFWVEGDLLFTRGNR
        KLTSKQARWQE LAEFD                                  +++ GS+RD +RE+LQ++ +A+ V+ LAK GKTRQFWVE DLL T+GNR
Subjt:  KLTSKQARWQELLAEFD---------------------------------SNKVDGSIRDLIREYLQRNPSARTVVELAKTGKTRQFWVEGDLLFTRGNR

Query:  L--------------------------WQQTYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHK
        L                          WQ+TYALLKKGYFWPNMR+DVMQYTKTCL CQQDKVE+ K+AGLL+PLP PTRP ESV +DFI+HLPKVG+ +
Subjt:  L--------------------------WQQTYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHK

Query:  AILIVIDRFFNYGEF----RRASLAT---------------GMADLQGPSGLNFFLFWVQ----AGTSPRVI----------------------------
        AIL++IDRF  Y  F    ++ S  T                 + +    G     FW +     GTS  +                             
Subjt:  AILIVIDRFFNYGEF----RRASLAT---------------GMADLQGPSGLNFFLFWVQ----AGTSPRVI----------------------------

Query:  -------------------THKPMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLI
                           T    G +P  + +     LPH++DHP+ GK+PQA NFTKEW+QT +IARAYLEKASK MKKWAD+KR PLEFR GD+VLI
Subjt:  -------------------THKPMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLI

Query:  KLRPEQIHFRGRKDQKLVRKYEGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPYHLNLEDDERNTVVRPGIDFKLKEDKEAEEILAERTRK
        KLRPEQ+ FRGRKDQ+LVRKYEGPVEV+KKVGN SY+V LPTWMKI+PVIHVSNLKPYH + ED +RN V RP ID   KEDK+ EEILAER R+
Subjt:  KLRPEQIHFRGRKDQKLVRKYEGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPYHLNLEDDERNTVVRPGIDFKLKEDKEAEEILAERTRK

A0A5D3C8Z6 Reverse transcriptase3.1e-15535.23Show/hide
Query:  MGALKFLSAIQKRVNGPKGTSKKGLMFVDATINSKPAKSTMVDSGATHNFISEQEARRLELTIEKDTGKMKVVNSEALPIVGVSKRVSLKLGTWTGSVNF
        MGALKFLS++QK+V       ++GLM+VD  IN KP KSTMVDSGATHNFI+E EA+RL L  EKD G+MK VNS ALPI+G+ KR  ++LG W+G V+F
Subjt:  MGALKFLSAIQKRVNGPKGTSKKGLMFVDATINSKPAKSTMVDSGATHNFISEQEARRLELTIEKDTGKMKVVNSEALPIVGVSKRVSLKLGTWTGSVNF

Query:  VVVGMDDFDDVLGMEYLIEHKVIPMRLAKCMIVTSNNPTVVTASIKQPGGIRMISALQLEKGLNREEPTFMAILMVEQTVEARDVPPEIQVVMREY----
        VVV MDDFD VLGME+L+EH+VIPM LAKC+++T   P+VV   ++QP G++MISA+QL+KGL+R+EPTFMAI +         VP EI  V+ +Y    
Subjt:  VVVGMDDFDDVLGMEYLIEHKVIPMRLAKCMIVTSNNPTVVTASIKQPGGIRMISALQLEKGLNREEPTFMAILMVEQTVEARDVPPEIQVVMREY----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------WRQYLLGSYFVVKTDNSAICHFFNQP
                                                                                  WRQYLLGS FVVK DNSA CHFF QP
Subjt:  --------------------------------------------------------------------------WRQYLLGSYFVVKTDNSAICHFFNQP

Query:  KLTSKQARWQELLAEFD---------------------------------SNKVDGSIRDLIREYLQRNPSARTVVELAKTGKTRQFWVEGDLLFTRGNR
        KLTSK+ARWQE LAEFD                                  +++ GS+RD +RE+LQ++ +A+ V+ L K GKTRQFWVE DLL T+GNR
Subjt:  KLTSKQARWQELLAEFD---------------------------------SNKVDGSIRDLIREYLQRNPSARTVVELAKTGKTRQFWVEGDLLFTRGNR

Query:  L--------------------------WQQTYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHK
        L                          WQ+TYALLKKGYFWPNMR DVMQYTKTCL CQQDKVE+ K+ GLL+PL  PTRP ESV +DFI+HLPKVG+ +
Subjt:  L--------------------------WQQTYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHK

Query:  AILIVIDRFFNYGEF---RRASLATGMADL----------------QGPSGLNFFLFWVQ----AGTSPRV-------------------------ITHK
        AIL+VIDRF  Y  F    +   A   A L                    G     FW +     GTS  +                          T  
Subjt:  AILIVIDRFFNYGEF---RRASLATGMADL----------------QGPSGLNFFLFWVQ----AGTSPRV-------------------------ITHK

Query:  PMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLIKLRPEQIHFRGRKDQKLVRKYE
          G +P  + +     LPH++DHP+ GK+PQA NFTKEWKQT +IARAYLEKASK MKKWAD+KR PLEFR  D+VLIKLRPEQ+ FRG KDQ LVRKYE
Subjt:  PMGGAPLRLCA----ELPHILDHPYVGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLIKLRPEQIHFRGRKDQKLVRKYE

Query:  GPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPYHLNLEDDERNTVVRPGIDFKLKEDKEAEEILAERTRK
        GP++V+KKVGN SY+VVLPTWMKI+PVIHVSNLKPYH + ED +RN V RP ID   KEDK+ EEILAER R+
Subjt:  GPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPYHLNLEDDERNTVVRPGIDFKLKEDKEAEEILAERTRK

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein3.9e-0935.53Show/hide
Query:  LLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHKAILIVIDRF
        ++ + + W  +R+ + +Y + C TCQ +K    K  G L+P+P   RP ES+ +DFI+ LP+   + A+ +V+DRF
Subjt:  LLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHKAILIVIDRF

P0CT41 Transposon Tf2-12 polyprotein3.9e-0935.53Show/hide
Query:  LLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHKAILIVIDRF
        ++ + + W  +R+ + +Y + C TCQ +K    K  G L+P+P   RP ES+ +DFI+ LP+   + A+ +V+DRF
Subjt:  LLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHKAILIVIDRF

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein1.8e-1424.78Show/hide
Query:  TYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEH-KAILIVIDRFFNYGEF---RRASLATGMAD
        T A +   Y+WP ++  ++QY +TC+ CQ  K  R ++ GLL+PLP        + +DF++ LP    +   IL+V+DRF     F   R+   AT + D
Subjt:  TYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEH-KAILIVIDRFFNYGEF---RRASLATGMAD

Query:  LQGPSGLNFFLFWVQAGTSPRVITH---------------KPMG---------------------------------------------------GAPLR
        L        F +       PR IT                K +G                                                     P R
Subjt:  LQGPSGLNFFLFWVQAGTSPRVITH---------------KPMG---------------------------------------------------GAPLR

Query:  LCAELPHILDHPYVGKSP--------QAHNFT-----KEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLIKLRPEQIHFRGRKDQKLVRKY
           + P  +D  Y+  +P         A +FT     K  K  T   +  LE A   M+   +++R PL   +GD VL+       +F+     K+ + Y
Subjt:  LCAELPHILDHPYVGKSP--------QAHNFT-----KEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLIKLRPEQIHFRGRKDQKLVRKY

Query:  EGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLK
         GP  VVKK+ + +Y++ L +  K H VI+V  LK
Subjt:  EGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLK

Q99315 Transposon Ty3-G Gag-Pol polyprotein1.0e-1424.63Show/hide
Query:  TYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEH-KAILIVIDRFFNYGEF---RRASLATGMAD
        T A +   Y+WP ++  ++QY +TC+ CQ  K  R ++ GLL+PLP        + +DF++ LP    +   IL+V+DRF     F   R+   AT + D
Subjt:  TYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEH-KAILIVIDRFFNYGEF---RRASLATGMAD

Query:  LQGPSGLNFFLFWVQAGTSPRVITH---------------KPMG---------------------------------------------------GAPLR
        L        F +       PR IT                K +G                                                     P R
Subjt:  LQGPSGLNFFLFWVQAGTSPRVITH---------------KPMG---------------------------------------------------GAPLR

Query:  LCAELPHILDHPYVGKSP--------QAHNFT-----KEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLIKLRPEQIHFRGRKDQKLVRKY
           + P  +D  Y+  +P         A +FT     K  K  T   +  LE A   M+   +++R PL   +GD VL+       +F+     K+ + Y
Subjt:  LCAELPHILDHPYVGKSP--------QAHNFT-----KEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLIKLRPEQIHFRGRKDQKLVRKY

Query:  EGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPY
         GP  VVKK+ + +Y++ L +  K H VI+V  LK +
Subjt:  EGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPY

Q9UR07 Transposon Tf2-11 polyprotein3.9e-0935.53Show/hide
Query:  LLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHKAILIVIDRF
        ++ + + W  +R+ + +Y + C TCQ +K    K  G L+P+P   RP ES+ +DFI+ LP+   + A+ +V+DRF
Subjt:  LLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTKIAGLLEPLPTPTRPQESVLLDFISHLPKVGEHKAILIVIDRF

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCGTTAAAATTCCTATCTGCCATTCAAAAGAGGGTCAATGGACCCAAAGGAACGTCCAAAAAGGGGCTTATGTTCGTAGATGCTACTATCAACTCTAAACCTGC
CAAGAGTACCATGGTGGATTCAGGTGCAACCCACAACTTTATATCAGAGCAGGAAGCCCGCCGACTGGAATTGACCATTGAGAAGGATACAGGCAAGATGAAGGTCGTCA
ACTCCGAAGCTCTACCCATTGTTGGAGTTTCTAAAAGAGTGTCGTTGAAATTGGGGACGTGGACAGGCAGTGTCAATTTCGTAGTGGTTGGCATGGACGACTTCGATGAT
GTACTGGGGATGGAATACCTCATCGAGCATAAAGTCATACCGATGCGTTTGGCCAAATGCATGATCGTCACTAGTAATAATCCCACTGTGGTTACAGCTAGCATCAAACA
GCCTGGTGGTATAAGGATGATATCCGCATTACAGTTAGAGAAAGGCCTCAACCGGGAGGAACCCACCTTCATGGCCATCTTAATGGTCGAACAGACTGTAGAGGCAAGAG
ATGTCCCACCTGAAATTCAAGTTGTCATGAGAGAGTATTGGAGGCAGTACTTGTTGGGCTCATACTTCGTGGTGAAGACAGACAACAGTGCCATTTGCCACTTCTTCAAC
CAGCCGAAGCTAACATCCAAACAGGCTAGGTGGCAAGAATTGTTAGCCGAGTTTGATTCTAACAAAGTGGACGGGTCGATCCGCGACCTTATCCGAGAATATCTTCAAAG
AAACCCCTCAGCCCGAACTGTGGTCGAGCTGGCTAAGACTGGGAAGACCCGCCAGTTCTGGGTCGAAGGGGACTTGTTATTTACAAGAGGAAATAGACTGTGGCAACAAA
CTTATGCTTTGCTGAAAAAGGGATACTTCTGGCCTAATATGCGTGAAGATGTGATGCAATACACGAAGACCTGTCTTACCTGTCAGCAAGATAAGGTAGAAAGGACAAAA
ATAGCAGGGTTGCTTGAACCCCTACCAACTCCTACGAGACCACAGGAGAGTGTGTTGCTCGACTTCATCTCCCACTTACCCAAGGTAGGGGAACACAAAGCCATTCTTAT
CGTTATTGATCGATTTTTCAACTATGGGGAGTTCCGACGAGCATCATTAGCGACAGGGATGGCCGATTTACAGGGACCTTCTGGACTGAACTTTTTTCTATTCTGGGTTC
AAGCCGGAACATCTCCTCGAGTTATCACCCACAAACCGATGGGAGGAGCCCCTTTGAGATTGTGTGCGGAACTGCCGCATATCCTTGACCACCCATATGTTGGGAAAAGT
CCTCAAGCCCACAACTTCACAAAGGAATGGAAGCAGACGACAGAGATTGCTCGAGCATATCTGGAAAAAGCTTCCAAACACATGAAGAAATGGGCCGACCGCAAGAGACA
CCCTCTCGAGTTTCGAGTAGGTGACAAAGTTCTTATCAAGCTGAGACCAGAACAGATTCATTTCCGAGGGCGCAAAGACCAAAAACTCGTGAGAAAGTACGAGGGACCAG
TGGAAGTCGTTAAGAAGGTGGGGAATGTCTCGTATAAGGTGGTGTTACCAACTTGGATGAAGATCCACCCAGTAATCCATGTGAGCAATTTAAAACCTTATCACCTCAAC
CTTGAGGATGACGAACGCAATACTGTTGTGCGGCCCGGCATCGACTTCAAACTGAAGGAAGACAAAGAAGCAGAAGAGATCCTTGCAGAGAGAACTAGAAAGGTGCCTTC
TTGGAATGTTGTGCCAAATATGATCACATCAGCACGCGTTGGCTGGACTCTGGCGGGCGCACGCGAGGCGGCATCTTGTGAGGATCTCTCTCATTCGGACGTGGTATCGG
TTCATTCATGCATCCATCCTCTCTACTCGGGCGTTAGGGAGTTCAGATGTACTACGGCTAATGTAGTTGACACTAGATGTACTACGGTTACAGTGGCTTCAATACCCGTG
GTTAGGGAGTTCGAAGATGCGTTCCCTGAAGATCTTCCAAGATTACCACCAATTAGAGAGTACATGGCAGATCTATCTCACATCATCGACTACAAGTCATTGTGTCTAAG
TGAGAAACTTAGTTATGAAGAGAAGCCAAGCCAAATTCTTGCGGGAGAATTGAAGACTCTTCGTAACTACGAAATATCTCTTGTTAAATTTCTTTGGCGGAGGAAGCAAC
TTGGGAACGAGAGGATGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCGTTAAAATTCCTATCTGCCATTCAAAAGAGGGTCAATGGACCCAAAGGAACGTCCAAAAAGGGGCTTATGTTCGTAGATGCTACTATCAACTCTAAACCTGC
CAAGAGTACCATGGTGGATTCAGGTGCAACCCACAACTTTATATCAGAGCAGGAAGCCCGCCGACTGGAATTGACCATTGAGAAGGATACAGGCAAGATGAAGGTCGTCA
ACTCCGAAGCTCTACCCATTGTTGGAGTTTCTAAAAGAGTGTCGTTGAAATTGGGGACGTGGACAGGCAGTGTCAATTTCGTAGTGGTTGGCATGGACGACTTCGATGAT
GTACTGGGGATGGAATACCTCATCGAGCATAAAGTCATACCGATGCGTTTGGCCAAATGCATGATCGTCACTAGTAATAATCCCACTGTGGTTACAGCTAGCATCAAACA
GCCTGGTGGTATAAGGATGATATCCGCATTACAGTTAGAGAAAGGCCTCAACCGGGAGGAACCCACCTTCATGGCCATCTTAATGGTCGAACAGACTGTAGAGGCAAGAG
ATGTCCCACCTGAAATTCAAGTTGTCATGAGAGAGTATTGGAGGCAGTACTTGTTGGGCTCATACTTCGTGGTGAAGACAGACAACAGTGCCATTTGCCACTTCTTCAAC
CAGCCGAAGCTAACATCCAAACAGGCTAGGTGGCAAGAATTGTTAGCCGAGTTTGATTCTAACAAAGTGGACGGGTCGATCCGCGACCTTATCCGAGAATATCTTCAAAG
AAACCCCTCAGCCCGAACTGTGGTCGAGCTGGCTAAGACTGGGAAGACCCGCCAGTTCTGGGTCGAAGGGGACTTGTTATTTACAAGAGGAAATAGACTGTGGCAACAAA
CTTATGCTTTGCTGAAAAAGGGATACTTCTGGCCTAATATGCGTGAAGATGTGATGCAATACACGAAGACCTGTCTTACCTGTCAGCAAGATAAGGTAGAAAGGACAAAA
ATAGCAGGGTTGCTTGAACCCCTACCAACTCCTACGAGACCACAGGAGAGTGTGTTGCTCGACTTCATCTCCCACTTACCCAAGGTAGGGGAACACAAAGCCATTCTTAT
CGTTATTGATCGATTTTTCAACTATGGGGAGTTCCGACGAGCATCATTAGCGACAGGGATGGCCGATTTACAGGGACCTTCTGGACTGAACTTTTTTCTATTCTGGGTTC
AAGCCGGAACATCTCCTCGAGTTATCACCCACAAACCGATGGGAGGAGCCCCTTTGAGATTGTGTGCGGAACTGCCGCATATCCTTGACCACCCATATGTTGGGAAAAGT
CCTCAAGCCCACAACTTCACAAAGGAATGGAAGCAGACGACAGAGATTGCTCGAGCATATCTGGAAAAAGCTTCCAAACACATGAAGAAATGGGCCGACCGCAAGAGACA
CCCTCTCGAGTTTCGAGTAGGTGACAAAGTTCTTATCAAGCTGAGACCAGAACAGATTCATTTCCGAGGGCGCAAAGACCAAAAACTCGTGAGAAAGTACGAGGGACCAG
TGGAAGTCGTTAAGAAGGTGGGGAATGTCTCGTATAAGGTGGTGTTACCAACTTGGATGAAGATCCACCCAGTAATCCATGTGAGCAATTTAAAACCTTATCACCTCAAC
CTTGAGGATGACGAACGCAATACTGTTGTGCGGCCCGGCATCGACTTCAAACTGAAGGAAGACAAAGAAGCAGAAGAGATCCTTGCAGAGAGAACTAGAAAGGTGCCTTC
TTGGAATGTTGTGCCAAATATGATCACATCAGCACGCGTTGGCTGGACTCTGGCGGGCGCACGCGAGGCGGCATCTTGTGAGGATCTCTCTCATTCGGACGTGGTATCGG
TTCATTCATGCATCCATCCTCTCTACTCGGGCGTTAGGGAGTTCAGATGTACTACGGCTAATGTAGTTGACACTAGATGTACTACGGTTACAGTGGCTTCAATACCCGTG
GTTAGGGAGTTCGAAGATGCGTTCCCTGAAGATCTTCCAAGATTACCACCAATTAGAGAGTACATGGCAGATCTATCTCACATCATCGACTACAAGTCATTGTGTCTAAG
TGAGAAACTTAGTTATGAAGAGAAGCCAAGCCAAATTCTTGCGGGAGAATTGAAGACTCTTCGTAACTACGAAATATCTCTTGTTAAATTTCTTTGGCGGAGGAAGCAAC
TTGGGAACGAGAGGATGAAATGA
Protein sequenceShow/hide protein sequence
MGALKFLSAIQKRVNGPKGTSKKGLMFVDATINSKPAKSTMVDSGATHNFISEQEARRLELTIEKDTGKMKVVNSEALPIVGVSKRVSLKLGTWTGSVNFVVVGMDDFDD
VLGMEYLIEHKVIPMRLAKCMIVTSNNPTVVTASIKQPGGIRMISALQLEKGLNREEPTFMAILMVEQTVEARDVPPEIQVVMREYWRQYLLGSYFVVKTDNSAICHFFN
QPKLTSKQARWQELLAEFDSNKVDGSIRDLIREYLQRNPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLWQQTYALLKKGYFWPNMREDVMQYTKTCLTCQQDKVERTK
IAGLLEPLPTPTRPQESVLLDFISHLPKVGEHKAILIVIDRFFNYGEFRRASLATGMADLQGPSGLNFFLFWVQAGTSPRVITHKPMGGAPLRLCAELPHILDHPYVGKS
PQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRHPLEFRVGDKVLIKLRPEQIHFRGRKDQKLVRKYEGPVEVVKKVGNVSYKVVLPTWMKIHPVIHVSNLKPYHLN
LEDDERNTVVRPGIDFKLKEDKEAEEILAERTRKVPSWNVVPNMITSARVGWTLAGAREAASCEDLSHSDVVSVHSCIHPLYSGVREFRCTTANVVDTRCTTVTVASIPV
VREFEDAFPEDLPRLPPIREYMADLSHIIDYKSLCLSEKLSYEEKPSQILAGELKTLRNYEISLVKFLWRRKQLGNERMK