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Moc04g17370 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g17370
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionZf-CCHC domain-containing protein/UBN2 domain-containing protein
Genome locationchr4:12809579..12810633
RNA-Seq ExpressionMoc04g17370
SyntenyMoc04g17370
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143648.1 uncharacterized protein LOC111013509 [Momordica charantia]1.2e-5179.02Show/hide
Query:  MTHEIIMKGNMEKDLKNKKSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHFKKRHFPNKTNIQEAKRENTTRDVIIYYECKNAGHIRSEYPLLRKSS
        MTHEI+MKGNME+D+K KKS ALKSTSFQ AS+SEEELNEEELAYLSKKFKKHFKKRHFP KTN Q+AK E  TRD+II YECK AGH+RSE PLLRKSS
Subjt:  MTHEIIMKGNMEKDLKNKKSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHFKKRHFPNKTNIQEAKRENTTRDVIIYYECKNAGHIRSEYPLLRKSS

Query:  SRRNKKAVKATWGESDEGSDFESRDEVDNLYFMTFRDEDDNNE
        SRRNKKA+KATW ESD GSD ES +EV NL FM F DEDD+ E
Subjt:  SRRNKKAVKATWGESDEGSDFESRDEVDNLYFMTFRDEDDNNE

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]6.0e-1942.48Show/hide
Query:  MTHEIIMKGNMEKDLKNKKSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHFKKRHFPNK--TNIQEAKRENTTRDVIIYYECKNAGHIRSEYPLLRK
        MTHEIIMK ++E + K KKS ALK+ S +   + E+ L+E+++AY S+K+K   K++ +  K  +  +E+K E + +D +I YECK +GHIR++ PLL K
Subjt:  MTHEIIMKGNMEKDLKNKKSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHFKKRHFPNK--TNIQEAKRENTTRDVIIYYECKNAGHIRSEYPLLRK

Query:  SSSRRNKKAVKATWGESDEGSDFESR-DEVDNLYFMTFRDEDDNNESPCSRRP
        SS +  KKA+KATW   D+ S+ ES  +E+ NL  M   D+DD ++   +  P
Subjt:  SSSRRNKKAVKATWGESDEGSDFESR-DEVDNLYFMTFRDEDDNNESPCSRRP

XP_038882256.1 uncharacterized protein LOC120073483 [Benincasa hispida]9.5e-2555.81Show/hide
Query:  MKGNMEKDLKNKKSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHFKKRHFPNKTNIQEAKRENTTRDVIIYYECKNAGHIRSEYPLLRKSSSRRNKK
        MK N+E+D+K KK+ ALKST  QE S++E ELN+EE AYL+KKFK HF+KR+F  K N QE K E + +D II YE K  GH++ + P  RKS S+++KK
Subjt:  MKGNMEKDLKNKKSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHFKKRHFPNKTNIQEAKRENTTRDVIIYYECKNAGHIRSEYPLLRKSSSRRNKK

Query:  AVKATWGESDEGSDFESRDEVDNLYFMTF
        A+KATW ESDE S+ ES +EV NL    F
Subjt:  AVKATWGESDEGSDFESRDEVDNLYFMTF

XP_038885875.1 uncharacterized protein LOC120076181 [Benincasa hispida]8.1e-3255.78Show/hide
Query:  MKGNMEKDLKNKKSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHFKKRHFPNKTNIQEAKRENTTRDVIIYYECKNAGHIRSEYP-------LLRKS
        MK N+E+D+K KKS ALKST  QE S++E ELN+EE AYL+KKFK HF+KR+F  K N QE K E + RD IIYYECK  GH++ + P         RK+
Subjt:  MKGNMEKDLKNKKSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHFKKRHFPNKTNIQEAKRENTTRDVIIYYECKNAGHIRSEYP-------LLRKS

Query:  SSRRNKKAVKATWGESDEGSDFESRDEVDNLYFMTFRDEDDNNESPC
         S++NKKA+KATW ESDE S+ +S +EV NL  M F D+DD+N+ PC
Subjt:  SSRRNKKAVKATWGESDEGSDFESRDEVDNLYFMTFRDEDDNNESPC

XP_038895919.1 uncharacterized protein LOC120084093 [Benincasa hispida]1.4e-3157.34Show/hide
Query:  MTHEIIMKGNMEKDLKNKKSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHFKKRHFPNKTNIQEAKRENTTRDVIIYYECKNAGHIRSEYPLLRKSS
        M HEIIMK N+E+D+K KK+  LKST  QE S++E ELN+EE AYL+KKFKKHF+KR+F  K N QE K E + RD II YECK  GH+  +YP  RK+ 
Subjt:  MTHEIIMKGNMEKDLKNKKSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHFKKRHFPNKTNIQEAKRENTTRDVIIYYECKNAGHIRSEYPLLRKSS

Query:  SRRNKKAVKATWGESDEGSDFESRDEVDNLYFMTFRDEDDNNE
        S++++KA+KAT  ESDE S+FES + V NL  M FRD+DD+++
Subjt:  SRRNKKAVKATWGESDEGSDFESRDEVDNLYFMTFRDEDDNNE

TrEMBL top hitse value%identityAlignment
A0A5A7SRY3 Zf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein6.1e-1738.69Show/hide
Query:  MTHEIIMKGNMEKDLKNKKSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHFKKRHFPNK--TNIQEAKRENTTRDVIIYYECKNAGHIRSEYPLLRK
        MTHEIIMK +++ + K KKS AL + S +   + E++L+E+++AY S+K++   K++ +  K  +  +E+K E   +D +IYYECK AG+IR++ P L K
Subjt:  MTHEIIMKGNMEKDLKNKKSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHFKKRHFPNK--TNIQEAKRENTTRDVIIYYECKNAGHIRSEYPLLRK

Query:  SSSRRNKKAVKATWGESDEGSDFESR-DEVDNLYFMTFRD-EDDNNESPCSRRPSHQKAYDIVVGLSN
        SS +  KKAVKATW   D+ S  ES  +E+ NL  M   D ED++++      PS  + ++    + N
Subjt:  SSSRRNKKAVKATWGESDEGSDFESR-DEVDNLYFMTFRD-EDDNNESPCSRRPSHQKAYDIVVGLSN

A0A5A7TZF4 Zf-CCHC domain-containing protein/UBN2 domain-containing protein8.7e-1639.73Show/hide
Query:  MTHEIIMKGNMEKDLKNKKSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHFKKRHFPNK--TNIQEAKRENTTRDVIIYYECKNAGHIRSEYPLLRK
        MTHEIIM  ++E + K KKS ALK+ S +   + E++L+++++ YLS+K+K   K++ +  K  +  +E+K E + +D +I YECK + HIR++ PLL K
Subjt:  MTHEIIMKGNMEKDLKNKKSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHFKKRHFPNK--TNIQEAKRENTTRDVIIYYECKNAGHIRSEYPLLRK

Query:  SSSRRNKKAVKATWGESDEGSDFESR-DEVDNLYFMTFRDEDDNNE
        SS +  KKA+KATW   D+ S+ ES  +++  L  M   D++D  +
Subjt:  SSSRRNKKAVKATWGESDEGSDFESR-DEVDNLYFMTFRDEDDNNE

A0A5D3E1G2 Zf-CCHC domain-containing protein/UBN2 domain-containing protein1.1e-1539.73Show/hide
Query:  MTHEIIMKGNMEKDLKNKKSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHFKKRHFPNK--TNIQEAKRENTTRDVIIYYECKNAGHIRSEYPLLRK
        MTHEIIM  ++E + K KKS ALK+ S +   + E++L+++++ YLS+K+K   KK+ +  K  +  +E+K E + +D +I YECK + HIR++ PLL K
Subjt:  MTHEIIMKGNMEKDLKNKKSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHFKKRHFPNK--TNIQEAKRENTTRDVIIYYECKNAGHIRSEYPLLRK

Query:  SSSRRNKKAVKATWGESDEGSDFESR-DEVDNLYFMTFRDEDDNNE
        SS +  KK +KATW   D+ S+ ES  +++  L  M   D++D  +
Subjt:  SSSRRNKKAVKATWGESDEGSDFESR-DEVDNLYFMTFRDEDDNNE

A0A6J1CR79 uncharacterized protein LOC1110135095.8e-5279.02Show/hide
Query:  MTHEIIMKGNMEKDLKNKKSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHFKKRHFPNKTNIQEAKRENTTRDVIIYYECKNAGHIRSEYPLLRKSS
        MTHEI+MKGNME+D+K KKS ALKSTSFQ AS+SEEELNEEELAYLSKKFKKHFKKRHFP KTN Q+AK E  TRD+II YECK AGH+RSE PLLRKSS
Subjt:  MTHEIIMKGNMEKDLKNKKSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHFKKRHFPNKTNIQEAKRENTTRDVIIYYECKNAGHIRSEYPLLRKSS

Query:  SRRNKKAVKATWGESDEGSDFESRDEVDNLYFMTFRDEDDNNE
        SRRNKKA+KATW ESD GSD ES +EV NL FM F DEDD+ E
Subjt:  SRRNKKAVKATWGESDEGSDFESRDEVDNLYFMTFRDEDDNNE

A0A6J1DUJ5 uncharacterized protein LOC1110241591.5e-1543.38Show/hide
Query:  MEKDLKNK-KSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHF--KKRHFPNKTNIQEAKRENTTRDVIIYYECKNAGHIRSEYPLLRKSSSRRNKKA
        ME + K K KS ALK+ + +  SK E  L+E+++AYLS+K+K     KK+   N +N +E+K E + +D +I Y+CK  GHIR++ PLL KSS +  KKA
Subjt:  MEKDLKNK-KSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHF--KKRHFPNKTNIQEAKRENTTRDVIIYYECKNAGHIRSEYPLLRKSSSRRNKKA

Query:  VKATWGESDEGSDFESRDEVDNLYFMTFRDEDDNNE
        +KATW +SDE       +EV N  FM   D++D  +
Subjt:  VKATWGESDEGSDFESRDEVDNLYFMTFRDEDDNNE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACATGAGATAATCATGAAAGGCAATATGGAAAAGGACCTCAAAAATAAGAAAAGTCATGCATTAAAGTCTACATCTTTCCAAGAGGCTTCTAAAAGTGAGGAAGA
ACTGAACGAGGAAGAACTTGCCTACTTATCCAAGAAGTTCAAGAAGCATTTCAAAAAGAGGCACTTTCCAAATAAAACAAACATTCAAGAGGCTAAAAGAGAAAATACCA
CTAGAGACGTCATCATCTACTACGAGTGCAAAAATGCTGGACATATAAGATCTGAATATCCTCTACTACGTAAATCATCTTCAAGGAGAAACAAGAAGGCTGTGAAAGCT
ACTTGGGGTGAAAGTGACGAAGGAAGTGATTTTGAAAGTAGAGATGAAGTAGATAATCTTTATTTCATGACTTTTAGAGATGAAGATGACAACAATGAGAGTCCGTGTAG
TCGTCGGCCTTCCCACCAGAAGGCCTATGATATAGTGGTCGGCCTTTCGAATGCCTCCTTCCTGCAACGCAACGATAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACACATGAGATAATCATGAAAGGCAATATGGAAAAGGACCTCAAAAATAAGAAAAGTCATGCATTAAAGTCTACATCTTTCCAAGAGGCTTCTAAAAGTGAGGAAGA
ACTGAACGAGGAAGAACTTGCCTACTTATCCAAGAAGTTCAAGAAGCATTTCAAAAAGAGGCACTTTCCAAATAAAACAAACATTCAAGAGGCTAAAAGAGAAAATACCA
CTAGAGACGTCATCATCTACTACGAGTGCAAAAATGCTGGACATATAAGATCTGAATATCCTCTACTACGTAAATCATCTTCAAGGAGAAACAAGAAGGCTGTGAAAGCT
ACTTGGGGTGAAAGTGACGAAGGAAGTGATTTTGAAAGTAGAGATGAAGTAGATAATCTTTATTTCATGACTTTTAGAGATGAAGATGACAACAATGAGAGTCCGTGTAG
TCGTCGGCCTTCCCACCAGAAGGCCTATGATATAGTGGTCGGCCTTTCGAATGCCTCCTTCCTGCAACGCAACGATAATTGA
Protein sequenceShow/hide protein sequence
MTHEIIMKGNMEKDLKNKKSHALKSTSFQEASKSEEELNEEELAYLSKKFKKHFKKRHFPNKTNIQEAKRENTTRDVIIYYECKNAGHIRSEYPLLRKSSSRRNKKAVKA
TWGESDEGSDFESRDEVDNLYFMTFRDEDDNNESPCSRRPSHQKAYDIVVGLSNASFLQRNDN