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Moc04g17450 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g17450
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionZf-CCHC domain-containing protein/UBN2 domain-containing protein
Genome locationchr4:12867070..12868047
RNA-Seq ExpressionMoc04g17450
SyntenyMoc04g17450
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046182.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]7.3e-1879.41Show/hide
Query:  KNESNALVELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVKASPNMPK
        +NE N L +LDKAK++IKKLTIGAQRLDKIIEVGK YGDKR LGYIDE STL SSKT FVKASP +PK
Subjt:  KNESNALVELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVKASPNMPK

KAA0051650.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]6.0e-2071.25Show/hide
Query:  KNESNALVELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVKASPNMPKLVAPKVVSKHVK
        +NE N L +LDKAK++IKKLTI AQRL +IIEVGK YGDKRGLGYIDE ST SSSKT FVKASP +P L  P  VS HV+
Subjt:  KNESNALVELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVKASPNMPKLVAPKVVSKHVK

XP_022156978.1 uncharacterized protein LOC111023806 [Momordica charantia]1.7e-2786.25Show/hide
Query:  KNESNALVELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVKASPNMPKLVAPKVVSKHVK
        KNES+ALVELDKAKD IK+LTIGAQRLDKIIE GKPYGDKRGLGYI+EC+T SSSKTIFVKASPNMPKLVAPKV  K  K
Subjt:  KNESNALVELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVKASPNMPKLVAPKVVSKHVK

XP_022158792.1 uncharacterized protein LOC111025259 [Momordica charantia]1.3e-2789.47Show/hide
Query:  MKNESNALVELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVKASPNMPKLVAPKVV
        M+N+   LVELDKAKDSIKKLTIGAQRLDKIIE+GKPYGDKRGLGYIDECST SSSK IFVKASPNMPKLVAPKVV
Subjt:  MKNESNALVELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVKASPNMPKLVAPKVV

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]1.1e-6368.53Show/hide
Query:  KNESNALVELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVKASPNMPKLVAPKVVSKHVKINFVPICHYCGVEGHIRPKY
        +NE + L ELDKAK++IKKLTIGAQRLDKIIEVGK YGDKRGLGYIDE ST SSSKT FVKASP +PK      VS HVK +FVPICH CGVEGHIRPK 
Subjt:  KNESNALVELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVKASPNMPKLVAPKVVSKHVKINFVPICHYCGVEGHIRPKY

Query:  FKLKYAQTNSSRRNFSQRAKPHNAPKENFSKKSRVHEFIAKDNSLHNVNCSSSGKYGHKAFSCYLSKSSALNVKGNVKFMHKHGNDRNMHVKSNLVP
        FKLKYAQ   SRRNFSQRAK + AP++NFS KSRVH+F+ K+ SLHNV C S GKYGHKA+SCYLS+SSA NV   +K++ K+ N   +  K   VP
Subjt:  FKLKYAQTNSSRRNFSQRAKPHNAPKENFSKKSRVHEFIAKDNSLHNVNCSSSGKYGHKAFSCYLSKSSALNVKGNVKFMHKHGNDRNMHVKSNLVP

TrEMBL top hitse value%identityAlignment
A0A5A7TRZ7 Zf-CCHC domain-containing protein/UBN2 domain-containing protein3.5e-1879.41Show/hide
Query:  KNESNALVELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVKASPNMPK
        +NE N L +LDKAK++IKKLTIGAQRLDKIIEVGK YGDKR LGYIDE STL SSKT FVKASP +PK
Subjt:  KNESNALVELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVKASPNMPK

A0A5A7U923 Zf-CCHC domain-containing protein/UBN2 domain-containing protein2.9e-2071.25Show/hide
Query:  KNESNALVELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVKASPNMPKLVAPKVVSKHVK
        +NE N L +LDKAK++IKKLTI AQRL +IIEVGK YGDKRGLGYIDE ST SSSKT FVKASP +P L  P  VS HV+
Subjt:  KNESNALVELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVKASPNMPKLVAPKVVSKHVK

A0A6J1DS74 uncharacterized protein LOC1110238068.4e-2886.25Show/hide
Query:  KNESNALVELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVKASPNMPKLVAPKVVSKHVK
        KNES+ALVELDKAKD IK+LTIGAQRLDKIIE GKPYGDKRGLGYI+EC+T SSSKTIFVKASPNMPKLVAPKV  K  K
Subjt:  KNESNALVELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVKASPNMPKLVAPKVVSKHVK

A0A6J1DY46 uncharacterized protein LOC1110252596.4e-2889.47Show/hide
Query:  MKNESNALVELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVKASPNMPKLVAPKVV
        M+N+   LVELDKAKDSIKKLTIGAQRLDKIIE+GKPYGDKRGLGYIDECST SSSK IFVKASPNMPKLVAPKVV
Subjt:  MKNESNALVELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVKASPNMPKLVAPKVV

A0A6J5TF60 Uncharacterized protein1.8e-1441.29Show/hide
Query:  ELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVK--ASPNMPKLV--------APKVVSK----HVKINFVPICHYCGVEG
        EL   K+ I+  TIGA ++DK++  GK +GDKRGLGYI+E ST SS +TIFVK  ++   PK V        +  +VSK      +  FVP CH+CGV+G
Subjt:  ELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVK--ASPNMPKLV--------APKVVSK----HVKINFVPICHYCGVEG

Query:  HIRPKYFKLKYAQTNSSRRNFSQRAKPHNAPK----ENFSKKSRVHEFIAKDNSL
        HIRP+   L+      S R      + H  PK     NF +K  VH     D+SL
Subjt:  HIRPKYFKLKYAQTNSSRRNFSQRAKPHNAPK----ENFSKKSRVHEFIAKDNSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G05360.1 Zinc knuckle (CCHC-type) family protein2.9e-0425.6Show/hide
Query:  ELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFV------KASPNMPKLVAPKVVSKHVKIN--------------------
        +L++ + +++ L  G ++L  I+ +GK   DK GLG+       S S  +FV       AS  + +      ++   + +                    
Subjt:  ELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFV------KASPNMPKLVAPKVVSKHVKIN--------------------

Query:  ----FVPICHYCGVEGHIRPKYFKL
            F P+CH+CGV GHIRP+ F+L
Subjt:  ----FVPICHYCGVEGHIRPKYFKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAATGAATCAAATGCTTTAGTGGAACTTGATAAGGCTAAAGATTCTATTAAAAAGTTAACAATAGGTGCTCAAAGATTGGACAAGATAATTGAAGTTGGTAAGCC
TTATGGTGATAAAAGAGGTTTAGGTTATATTGATGAATGCTCTACTCTCTCAAGTTCTAAAACTATCTTTGTTAAAGCATCTCCTAATATGCCTAAACTTGTTGCTCCTA
AAGTTGTATCTAAACATGTTAAAATTAACTTTGTGCCTATATGTCATTATTGTGGTGTTGAAGGTCATATTAGACCTAAATACTTTAAATTGAAATATGCACAAACTAAT
TCTTCTAGAAGAAATTTTTCTCAAAGAGCAAAGCCTCACAATGCTCCAAAAGAAAATTTCTCAAAGAAAAGTAGAGTGCATGAATTTATTGCAAAAGATAATTCATTGCA
TAATGTTAATTGTTCATCAAGTGGCAAGTATGGACATAAAGCTTTTTCTTGTTACTTGTCTAAATCTAGTGCTTTAAATGTCAAAGGAAATGTTAAATTTATGCATAAAC
ATGGAAATGATAGAAATATGCATGTAAAATCAAATCTTGTGCCTAATCATGCTTGTGGTAAAACTAGTTGTATGCCTAATGCTAAATTTGTGCCTAAGCATGTTCATGGA
AAATCAAATTATAGGCATAATGTCAAATTTGTACTTACATGTCATTTTTGTGGAGTTAAAGGTCATATTAGACCAAATGGTTTCAAATTGAAAAATTCTCCAAAGAAAAA
TTTATTTAAGAAAAATATTGTGCAAAATAATTTTGTTAAGAAGAAATTATTGTCTGATGATTGTGGCAAAATTGATCATAAATTTTATACATGTTATTTGCCAAAATTAA
ATACAAATAATGTTGGAACTAACTTGAGGTGGGTTCCAAAATCTATGCTTCCTTACAGTGAAGGACCTACCAAATGGGTACCAAGATCTTTTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAATGAATCAAATGCTTTAGTGGAACTTGATAAGGCTAAAGATTCTATTAAAAAGTTAACAATAGGTGCTCAAAGATTGGACAAGATAATTGAAGTTGGTAAGCC
TTATGGTGATAAAAGAGGTTTAGGTTATATTGATGAATGCTCTACTCTCTCAAGTTCTAAAACTATCTTTGTTAAAGCATCTCCTAATATGCCTAAACTTGTTGCTCCTA
AAGTTGTATCTAAACATGTTAAAATTAACTTTGTGCCTATATGTCATTATTGTGGTGTTGAAGGTCATATTAGACCTAAATACTTTAAATTGAAATATGCACAAACTAAT
TCTTCTAGAAGAAATTTTTCTCAAAGAGCAAAGCCTCACAATGCTCCAAAAGAAAATTTCTCAAAGAAAAGTAGAGTGCATGAATTTATTGCAAAAGATAATTCATTGCA
TAATGTTAATTGTTCATCAAGTGGCAAGTATGGACATAAAGCTTTTTCTTGTTACTTGTCTAAATCTAGTGCTTTAAATGTCAAAGGAAATGTTAAATTTATGCATAAAC
ATGGAAATGATAGAAATATGCATGTAAAATCAAATCTTGTGCCTAATCATGCTTGTGGTAAAACTAGTTGTATGCCTAATGCTAAATTTGTGCCTAAGCATGTTCATGGA
AAATCAAATTATAGGCATAATGTCAAATTTGTACTTACATGTCATTTTTGTGGAGTTAAAGGTCATATTAGACCAAATGGTTTCAAATTGAAAAATTCTCCAAAGAAAAA
TTTATTTAAGAAAAATATTGTGCAAAATAATTTTGTTAAGAAGAAATTATTGTCTGATGATTGTGGCAAAATTGATCATAAATTTTATACATGTTATTTGCCAAAATTAA
ATACAAATAATGTTGGAACTAACTTGAGGTGGGTTCCAAAATCTATGCTTCCTTACAGTGAAGGACCTACCAAATGGGTACCAAGATCTTTTGGTTGA
Protein sequenceShow/hide protein sequence
MKNESNALVELDKAKDSIKKLTIGAQRLDKIIEVGKPYGDKRGLGYIDECSTLSSSKTIFVKASPNMPKLVAPKVVSKHVKINFVPICHYCGVEGHIRPKYFKLKYAQTN
SSRRNFSQRAKPHNAPKENFSKKSRVHEFIAKDNSLHNVNCSSSGKYGHKAFSCYLSKSSALNVKGNVKFMHKHGNDRNMHVKSNLVPNHACGKTSCMPNAKFVPKHVHG
KSNYRHNVKFVLTCHFCGVKGHIRPNGFKLKNSPKKNLFKKNIVQNNFVKKKLLSDDCGKIDHKFYTCYLPKLNTNNVGTNLRWVPKSMLPYSEGPTKWVPRSFG