; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g17600 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g17600
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:12971470..12972255
RNA-Seq ExpressionMoc04g17600
SyntenyMoc04g17600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]6.1e-2470.67Show/hide
Query:  MRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA
        M+ K+PPKF+LP +K+YDGSTDP+DHL  Y EW D+YGI EAIRCRVF+F L  +TRIWF+QL+RKSI SFKELA
Subjt:  MRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]4.4e-2264.1Show/hide
Query:  EEIMRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA
        EEIM+ K+PPKF+LPT+KQ+DG+ D VDHL  YREWMD+YG++EA++CRVF+  L  + R+WFRQL+R SI SFK LA
Subjt:  EEIMRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]2.0e-1964Show/hide
Query:  MRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA
        M+ K  PKF+LP + +YDGS DP+DHL  YREW D+Y I EAIRCRVF+F L  + R WFRQL+R SI SFKELA
Subjt:  MRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]8.2e-2969.23Show/hide
Query:  LEETIDQADSPSEEEIMRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA
        LEE +DQADSP  EEIMR K+PPKF+LPT+KQ+D +TDPVDHL  YREWMD+YG++EA+RCRVF+  L  + RIWFRQL+R SI SFK LA
Subjt:  LEETIDQADSPSEEEIMRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]3.4e-2767.03Show/hide
Query:  LEETIDQADSPSEEEIMRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA
        LEE + QADSP  EEIMR K+PPKF+LPT+K +DG T+PVDHL  YREWMD+YG+++AIRCRVF+  L  + RIWFRQL+R SI SFK LA
Subjt:  LEETIDQADSPSEEEIMRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166192.9e-2470.67Show/hide
Query:  MRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA
        M+ K+PPKF+LP +K+YDGSTDP+DHL  Y EW D+YGI EAIRCRVF+F L  +TRIWF+QL+RKSI SFKELA
Subjt:  MRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA

A0A6J1D7D2 uncharacterized protein LOC1110183072.1e-2264.1Show/hide
Query:  EEIMRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA
        EEIM+ K+PPKF+LPT+KQ+DG+ D VDHL  YREWMD+YG++EA++CRVF+  L  + R+WFRQL+R SI SFK LA
Subjt:  EEIMRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA

A0A6J1DWY0 uncharacterized protein LOC1110252934.0e-2969.23Show/hide
Query:  LEETIDQADSPSEEEIMRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA
        LEE +DQADSP  EEIMR K+PPKF+LPT+KQ+D +TDPVDHL  YREWMD+YG++EA+RCRVF+  L  + RIWFRQL+R SI SFK LA
Subjt:  LEETIDQADSPSEEEIMRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA

A0A6J1DZ49 uncharacterized protein LOC1110248519.8e-2064Show/hide
Query:  MRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA
        M+ K  PKF+LP + +YDGS DP+DHL  YREW D+Y I EAIRCRVF+F L  + R WFRQL+R SI SFKELA
Subjt:  MRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA

A0A6J1E1E7 uncharacterized protein LOC1110255481.7e-2767.03Show/hide
Query:  LEETIDQADSPSEEEIMRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA
        LEE + QADSP  EEIMR K+PPKF+LPT+K +DG T+PVDHL  YREWMD+YG+++AIRCRVF+  L  + RIWFRQL+R SI SFK LA
Subjt:  LEETIDQADSPSEEEIMRGKIPPKFRLPTLKQYDGSTDPVDHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCTGGAGATAAACCACAACATTCTGATGACGAACACCATACAACTTGGAGGTTGTCTTTGCCCGAGATGGCCGAGGAAATTCTTGAACAGAACAGATTG
ATCACTTTAGTAAAGAAGGTCACAGGGATGGACCAGAGCATATCCCTCCTCCTCAAAAGTCTTCAGCAACCAGGAAATAGGGAATGTGGTCTCGAAGAAACTATA
GATCAGGCAGATTCGCCATCCGAGGAGGAGATAATGAGAGGAAAGATCCCTCCAAAATTTAGACTCCCTACTTTAAAGCAATACGACGGCTCAACAGATCCTGTC
GACCATCTGTGCACATATAGGGAATGGATGGACCTCTACGGAATAGCAGAGGCAATCAGGTGCAGAGTATTCACTTTCATGTTAATCGACACAACTCGTATATGG
TTCCGACAATTGAGAAGAAAATCAATCTTCTCTTTCAAAGAGCTGGCTTTATCACGCAATTCATTAGAGGACAGGATAGGAGTCGACCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCTGGAGATAAACCACAACATTCTGATGACGAACACCATACAACTTGGAGGTTGTCTTTGCCCGAGATGGCCGAGGAAATTCTTGAACAGAACAGATTG
ATCACTTTAGTAAAGAAGGTCACAGGGATGGACCAGAGCATATCCCTCCTCCTCAAAAGTCTTCAGCAACCAGGAAATAGGGAATGTGGTCTCGAAGAAACTATA
GATCAGGCAGATTCGCCATCCGAGGAGGAGATAATGAGAGGAAAGATCCCTCCAAAATTTAGACTCCCTACTTTAAAGCAATACGACGGCTCAACAGATCCTGTC
GACCATCTGTGCACATATAGGGAATGGATGGACCTCTACGGAATAGCAGAGGCAATCAGGTGCAGAGTATTCACTTTCATGTTAATCGACACAACTCGTATATGG
TTCCGACAATTGAGAAGAAAATCAATCTTCTCTTTCAAAGAGCTGGCTTTATCACGCAATTCATTAGAGGACAGGATAGGAGTCGACCTGTGA
Protein sequenceShow/hide protein sequence
MNSGDKPQHSDDEHHTTWRLSLPEMAEEILEQNRLITLVKKVTGMDQSISLLLKSLQQPGNRECGLEETIDQADSPSEEEIMRGKIPPKFRLPTLKQYDGSTDPV
DHLCTYREWMDLYGIAEAIRCRVFTFMLIDTTRIWFRQLRRKSIFSFKELALSRNSLEDRIGVDL