; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g17640 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g17640
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr4:13004301..13007356
RNA-Seq ExpressionMoc04g17640
SyntenyMoc04g17640
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042317.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.4e-7537.92Show/hide
Query:  MFSVSLSGALEGYFPGRRDLRQGDHFSPYLFVIAMEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFEDSEEL----
        MFS+ ++G+LEG+F GR+ +RQG+  SP+ FV+ M+V SR+LNK P GF+FH  CE+V L  L F DDLMI    D+ SLSF+++    F +   L    
Subjt:  MFSVSLSGALEGYFPGRRDLRQGDHFSPYLFVIAMEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFEDSEEL----

Query:  ----VFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLSRRISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHD
            +F  G       RLAA +GF + +L VRYL + LL+ R+   DC PL++RI  R+R+W+AR+LSFA    L+R V +S QVYWASVF+LP+ V + 
Subjt:  ----VFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLSRRISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHD

Query:  VEQILHSFLWKGHEN-GWSGTK---------------VAWSEVCIPFEISLGGLGGGLYSSGRDCIWIIRACLGSLGVGGILFLSGMLFGLWFSLLLEMI
        V++IL S+LW+  +   W+ T                VAW E  I    SL  +  G+  S     W +RA L             + + +W    +E+ 
Subjt:  VEQILHSFLWKGHEN-GWSGTK---------------VAWSEVCIPFEISLGGLGGGLYSSGRDCIWIIRACLGSLGVGGILFLSGMLFGLWFSLLLEMI

Query:  MVVLCGMTLD--FQGVRFIRGLVTGLSMMLDWVFMLNARTKREKEARLDEFGG-------------------EVAGIYSCAEL------ISTSSGLFSVS
            C + LD   QGV  +  +  G  ++ D            +EARL EF G                    V  +  C  +      +    G FS++
Subjt:  MVVLCGMTLD--FQGVRFIRGLVTGLSMMLDWVFMLNARTKREKEARLDEFGG-------------------EVAGIYSCAEL------ISTSSGLFSVS

Query:  NALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCT-GQESWDNLFFECPFSWEVWSSMIAWAGSSRRISYWSTE
        +ALD +RP    V W  L+W GGN+PKHSF AWL ++++L TRDRL RWD SV +S + C  G ES D+LFF CPF  +VWS ++    SS RI YW  E
Subjt:  NALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCT-GQESWDNLFFECPFSWEVWSSMIAWAGSSRRISYWSTE

Query:  L
        L
Subjt:  L

KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]2.7e-7940.04Show/hide
Query:  MFSVSLSGALEGYFPGRRDLRQGDHFSPYLFVIAMEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFEDSEEL----
        MFS+ ++G+LEG+F GR+ LRQGD  SP+LFV+ MEVLSR+LNK P  FRFH +CE+V L HL F DDLMI    D+ S+SFI++    F +   L    
Subjt:  MFSVSLSGALEGYFPGRRDLRQGDHFSPYLFVIAMEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFEDSEEL----

Query:  ----VFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLSRRISHH------DCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILP
            +F +G+       LAA +G S       +     LS   S H      DC PL++RI  R+R+W+AR+LSFA  L L+R V +S QVYWASVF+LP
Subjt:  ----VFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLSRRISHH------DCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILP

Query:  ARVLHDVEQILHSFLWKGHENGWSGTKVAWSEVCIPFEISLGGLGGGLYSSGRDCIWIIRACLGSLGVGGILFLSGMLFGLWFSLLLEMIMVVLCGMTLD
        A V ++V++IL S+LW+G E G  G KVAW +VC+PFE    G+  G   +  + + I+   LGSL V             W      M   +L G +L 
Subjt:  ARVLHDVEQILHSFLWKGHENGWSGTKVAWSEVCIPFEISLGGLGGGLYSSGRDCIWIIRACLGSLGVGGILFLSGMLFGLWFSLLLEMIMVVLCGMTLD

Query:  FQGVRF-----IRGLVTGLSMMLDWV---FMLNARTKREKEARLDEF---GGE----------------VAGIYSCAEL------ISTSSGLFSVSNALD
            R      +R ++     M   V    + +A ++R  EA+L +F    GE                V  +  C  +      +    G FS+++A +
Subjt:  FQGVRF-----IRGLVTGLSMMLDWV---FMLNARTKREKEARLDEF---GGE----------------VAGIYSCAEL------ISTSSGLFSVSNALD

Query:  VLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCT-GQESWDNLFFECPFSWEVWSSMIAWAGSSRRISYWSTEL
         + P    V W  L+W GGNIPKHSF AWLA++DRL TRDRL RWD S+ +SC+ C  G ES D+LFF CPF  +VWS +     SS RI +W  EL
Subjt:  VLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCT-GQESWDNLFFECPFSWEVWSSMIAWAGSSRRISYWSTEL

XP_022149381.1 uncharacterized protein LOC111017811 [Momordica charantia]5.6e-6947.81Show/hide
Query:  MEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFEDSEELV--------FGMGLPVVEEDRLAAFLGFSVVSLLVRYL
        M VLSR+LN++   FRFH KC+ V L HLCF DDLMI S  D GSLSF+ +V  SF +   LV        FG G+P VE ++LAAF  FSV S  VRYL
Subjt:  MEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFEDSEELV--------FGMGLPVVEEDRLAAFLGFSVVSLLVRYL

Query:  GVLLLSRRISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHDVEQILHSFLWKGHENGWSGTKVAWSEVCIPFEIS
        GV L S R+SHHDC+PLLE+I+ RV +WSARM SFAS L LI+ + QSFQ   +   +  A +          FL  GH N                E +
Subjt:  GVLLLSRRISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHDVEQILHSFLWKGHENGWSGTKVAWSEVCIPFEIS

Query:  LGGLGGGLYSSGRDCIWIIRACLGSLGVGG-ILFLSGMLFGLWFSLLLEMIMVVLCGMTLDFQGVRFIRGLVTGLSMMLDWVFMLNARTKREKEARLDEF
        L  L  G         W+    +G L VGG I FLS MLF LWF L LEM+ VVL GMTL F                  W+  L+      K+ R D  
Subjt:  LGGLGGGLYSSGRDCIWIIRACLGSLGVGG-ILFLSGMLFGLWFSLLLEMIMVVLCGMTLDFQGVRFIRGLVTGLSMMLDWVFMLNARTKREKEARLDEF

Query:  GGEVAGIYSCAELISTSSGLFSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTGQES
                     I  SSGLFSVS+A DVLRP +P VPWFS +WF GNI KHSFIAWLA+RDRLAT DRL RWD S+ VSCVFC   ES
Subjt:  GGEVAGIYSCAELISTSSGLFSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTGQES

XP_022157473.1 uncharacterized protein LOC111024165 [Momordica charantia]2.2e-15871.15Show/hide
Query:  MEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFEDSEELVFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLSRR
        MEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFEDSEELVFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLSRR
Subjt:  MEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFEDSEELVFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLSRR

Query:  ISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHDVEQILHSFLWKGHENGWSGTKVAWSEVCIPFEISLGGLGGGL
        ISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHDVEQILHSFLWKGHENGWSGTKVAWSE                
Subjt:  ISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHDVEQILHSFLWKGHENGWSGTKVAWSEVCIPFEISLGGLGGGL

Query:  YSSGRDCIWIIRACLGSLGVGGILFLSGMLFGLWFSLLLEMIMVVLCGMTLDFQGVRFIRGLVTGLSMMLDWVFMLNARTKREKEARLDEFGGEVAGIYS
                                                                                                            
Subjt:  YSSGRDCIWIIRACLGSLGVGGILFLSGMLFGLWFSLLLEMIMVVLCGMTLDFQGVRFIRGLVTGLSMMLDWVFMLNARTKREKEARLDEFGGEVAGIYS

Query:  CAELISTSSGLFSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTGQESWDNLFFECPFSWEVWSSMIA
            ISTSSGLFSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTGQESWDNLFFECPFSWEVWSSMIA
Subjt:  CAELISTSSGLFSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTGQESWDNLFFECPFSWEVWSSMIA

Query:  WAGSSRRISYWSTELP
        WAGSSRRISYWSTELP
Subjt:  WAGSSRRISYWSTELP

XP_031737043.1 uncharacterized protein LOC116402131 [Cucumis sativus]2.2e-8940.99Show/hide
Query:  MFSVSLSGALEGYFPGRRDLRQGDHFSPYLFVIAMEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFED--------
        MFS+ ++G+LEG+F GR+ LRQGD  S +LFV+ MEVLSR+LN  P  F+FH  CE+V L HL F DDLMI    D  S+SFIK+    F +        
Subjt:  MFSVSLSGALEGYFPGRRDLRQGDHFSPYLFVIAMEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFED--------

Query:  SEELVFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLSRRISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHD
        ++  +F +G+   +  RLAA +GFS+  L VRYLG+ LL  R+   DC PL++RI  R+R+WSAR+LSFA  L L+R V +S QVYWASVF+LP +V  D
Subjt:  SEELVFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLSRRISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHD

Query:  VEQILHSFLWKGHENGWSGTKVAWSEVCIPFEISLGGLGGGLYSSGRDCIWIIRACLGSLGVGGILFLSGMLFGLWFSLLLEMIMVVLCGMTLDFQGVRF
        V++IL S+LW+G E G  G KVAW EVC+PF+   GGL     SS     W I + L  L +  +L  SG L+  W    +     +L  + L   G+  
Subjt:  VEQILHSFLWKGHENGWSGTKVAWSEVCIPFEISLGGLGGGLYSSGRDCIWIIRACLGSLGVGGILFLSGMLFGLWFSLLLEMIMVVLCGMTLDFQGVRF

Query:  IRGLVTGLSMMLDWVF----------------------MLNARTKREKEARLDEF------------GGEVAGIYSCAELISTSSGL-------------
        + G+   L +   W                        + +A ++R  +ARL +F              ++  I+   + +  SS +             
Subjt:  IRGLVTGLSMMLDWVF----------------------MLNARTKREKEARLDEF------------GGEVAGIYSCAELISTSSGL-------------

Query:  FSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTGQ-ESWDNLFFECPFSWEVWSSMIAWAGSSRRISY
        FS+++A + +RP    V W  L+W  GNIPKHSF AWLA+RDRL TRDRL +WD S+ +SC+ C G  ES D+LFF CPF WE+WS ++ +  SS RI Y
Subjt:  FSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTGQ-ESWDNLFFECPFSWEVWSSMIAWAGSSRRISY

Query:  WSTEL
        W  EL
Subjt:  WSTEL

TrEMBL top hitse value%identityAlignment
A0A5A7TKU4 Non-LTR retroelement reverse transcriptase-like protein6.7e-7637.92Show/hide
Query:  MFSVSLSGALEGYFPGRRDLRQGDHFSPYLFVIAMEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFEDSEEL----
        MFS+ ++G+LEG+F GR+ +RQG+  SP+ FV+ M+V SR+LNK P GF+FH  CE+V L  L F DDLMI    D+ SLSF+++    F +   L    
Subjt:  MFSVSLSGALEGYFPGRRDLRQGDHFSPYLFVIAMEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFEDSEEL----

Query:  ----VFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLSRRISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHD
            +F  G       RLAA +GF + +L VRYL + LL+ R+   DC PL++RI  R+R+W+AR+LSFA    L+R V +S QVYWASVF+LP+ V + 
Subjt:  ----VFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLSRRISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHD

Query:  VEQILHSFLWKGHEN-GWSGTK---------------VAWSEVCIPFEISLGGLGGGLYSSGRDCIWIIRACLGSLGVGGILFLSGMLFGLWFSLLLEMI
        V++IL S+LW+  +   W+ T                VAW E  I    SL  +  G+  S     W +RA L             + + +W    +E+ 
Subjt:  VEQILHSFLWKGHEN-GWSGTK---------------VAWSEVCIPFEISLGGLGGGLYSSGRDCIWIIRACLGSLGVGGILFLSGMLFGLWFSLLLEMI

Query:  MVVLCGMTLD--FQGVRFIRGLVTGLSMMLDWVFMLNARTKREKEARLDEFGG-------------------EVAGIYSCAEL------ISTSSGLFSVS
            C + LD   QGV  +  +  G  ++ D            +EARL EF G                    V  +  C  +      +    G FS++
Subjt:  MVVLCGMTLD--FQGVRFIRGLVTGLSMMLDWVFMLNARTKREKEARLDEFGG-------------------EVAGIYSCAEL------ISTSSGLFSVS

Query:  NALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCT-GQESWDNLFFECPFSWEVWSSMIAWAGSSRRISYWSTE
        +ALD +RP    V W  L+W GGN+PKHSF AWL ++++L TRDRL RWD SV +S + C  G ES D+LFF CPF  +VWS ++    SS RI YW  E
Subjt:  NALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCT-GQESWDNLFFECPFSWEVWSSMIAWAGSSRRISYWSTE

Query:  L
        L
Subjt:  L

A0A5A7TZS0 Reverse transcriptase domain-containing protein1.3e-7940.04Show/hide
Query:  MFSVSLSGALEGYFPGRRDLRQGDHFSPYLFVIAMEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFEDSEEL----
        MFS+ ++G+LEG+F GR+ LRQGD  SP+LFV+ MEVLSR+LNK P  FRFH +CE+V L HL F DDLMI    D+ S+SFI++    F +   L    
Subjt:  MFSVSLSGALEGYFPGRRDLRQGDHFSPYLFVIAMEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFEDSEEL----

Query:  ----VFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLSRRISHH------DCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILP
            +F +G+       LAA +G S       +     LS   S H      DC PL++RI  R+R+W+AR+LSFA  L L+R V +S QVYWASVF+LP
Subjt:  ----VFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLSRRISHH------DCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILP

Query:  ARVLHDVEQILHSFLWKGHENGWSGTKVAWSEVCIPFEISLGGLGGGLYSSGRDCIWIIRACLGSLGVGGILFLSGMLFGLWFSLLLEMIMVVLCGMTLD
        A V ++V++IL S+LW+G E G  G KVAW +VC+PFE    G+  G   +  + + I+   LGSL V             W      M   +L G +L 
Subjt:  ARVLHDVEQILHSFLWKGHENGWSGTKVAWSEVCIPFEISLGGLGGGLYSSGRDCIWIIRACLGSLGVGGILFLSGMLFGLWFSLLLEMIMVVLCGMTLD

Query:  FQGVRF-----IRGLVTGLSMMLDWV---FMLNARTKREKEARLDEF---GGE----------------VAGIYSCAEL------ISTSSGLFSVSNALD
            R      +R ++     M   V    + +A ++R  EA+L +F    GE                V  +  C  +      +    G FS+++A +
Subjt:  FQGVRF-----IRGLVTGLSMMLDWV---FMLNARTKREKEARLDEF---GGE----------------VAGIYSCAEL------ISTSSGLFSVSNALD

Query:  VLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCT-GQESWDNLFFECPFSWEVWSSMIAWAGSSRRISYWSTEL
         + P    V W  L+W GGNIPKHSF AWLA++DRL TRDRL RWD S+ +SC+ C  G ES D+LFF CPF  +VWS +     SS RI +W  EL
Subjt:  VLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCT-GQESWDNLFFECPFSWEVWSSMIAWAGSSRRISYWSTEL

A0A5D3CLU1 Non-LTR retroelement reverse transcriptase-like protein3.6e-6937.58Show/hide
Query:  MFSVSLSGALEGYFPGRRDLRQGDHFSPYLFVIAMEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFED--------
        MFS+ ++G+LEG F GR+D+RQG+  SP+LFV+ MEVLSR+LNK P  F+FH +CE+V L HL F DDLMI    D+ S+ FI++    F +        
Subjt:  MFSVSLSGALEGYFPGRRDLRQGDHFSPYLFVIAMEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFED--------

Query:  SEELVFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLSRRISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHD
         +  +F  G+      +LAA +GF   +L VRYLG+ LL+ R+  +DC P+++RI  R+R+W AR+LSFA  L L+  V +S QVYWASVF+LPA V ++
Subjt:  SEELVFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLSRRISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHD

Query:  VEQILHSFLWKGHENGWSGTKVAWSEVCIPFEISLGGLGGGLYSSGRDCIWIIRACLGSLGVGGI--LFLSGMLFGLWFSLLLE--MIMVVLCGMTLDFQ
        V++IL S+LW+           +W+                  +S    +W++   LGSL V  +    L G       S +     +  +L G  L+  
Subjt:  VEQILHSFLWKGHENGWSGTKVAWSEVCIPFEISLGGLGGGLYSSGRDCIWIIRACLGSLGVGGI--LFLSGMLFGLWFSLLLE--MIMVVLCGMTLDFQ

Query:  GVRFIRGLVTGLSMMLDWVFMLNARTKREKEARLDEFGG------------EVAGIYSCAELIST-------------SSGLFSVSNALDVLRPVRPPVP
        G R                 + +A ++R  EARL +F G            E+  ++   + +S                G FS+++A   +RP    V 
Subjt:  GVRFIRGLVTGLSMMLDWVFMLNARTKREKEARLDEFGG------------EVAGIYSCAELIST-------------SSGLFSVSNALDVLRPVRPPVP

Query:  WFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCT-GQESWDNLFFECPFSWEVWSSMI
        W  L+W G NIPKHSF AWLA++DRL TRDRL RWD SV + C+ C  G ES D+LFF CPF  +VWS ++
Subjt:  WFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCT-GQESWDNLFFECPFSWEVWSSMI

A0A6J1D875 uncharacterized protein LOC1110178112.7e-6947.81Show/hide
Query:  MEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFEDSEELV--------FGMGLPVVEEDRLAAFLGFSVVSLLVRYL
        M VLSR+LN++   FRFH KC+ V L HLCF DDLMI S  D GSLSF+ +V  SF +   LV        FG G+P VE ++LAAF  FSV S  VRYL
Subjt:  MEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFEDSEELV--------FGMGLPVVEEDRLAAFLGFSVVSLLVRYL

Query:  GVLLLSRRISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHDVEQILHSFLWKGHENGWSGTKVAWSEVCIPFEIS
        GV L S R+SHHDC+PLLE+I+ RV +WSARM SFAS L LI+ + QSFQ   +   +  A +          FL  GH N                E +
Subjt:  GVLLLSRRISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHDVEQILHSFLWKGHENGWSGTKVAWSEVCIPFEIS

Query:  LGGLGGGLYSSGRDCIWIIRACLGSLGVGG-ILFLSGMLFGLWFSLLLEMIMVVLCGMTLDFQGVRFIRGLVTGLSMMLDWVFMLNARTKREKEARLDEF
        L  L  G         W+    +G L VGG I FLS MLF LWF L LEM+ VVL GMTL F                  W+  L+      K+ R D  
Subjt:  LGGLGGGLYSSGRDCIWIIRACLGSLGVGG-ILFLSGMLFGLWFSLLLEMIMVVLCGMTLDFQGVRFIRGLVTGLSMMLDWVFMLNARTKREKEARLDEF

Query:  GGEVAGIYSCAELISTSSGLFSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTGQES
                     I  SSGLFSVS+A DVLRP +P VPWFS +WF GNI KHSFIAWLA+RDRLAT DRL RWD S+ VSCVFC   ES
Subjt:  GGEVAGIYSCAELISTSSGLFSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTGQES

A0A6J1DTG0 uncharacterized protein LOC1110241651.1e-15871.15Show/hide
Query:  MEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFEDSEELVFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLSRR
        MEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFEDSEELVFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLSRR
Subjt:  MEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFEDSEELVFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLSRR

Query:  ISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHDVEQILHSFLWKGHENGWSGTKVAWSEVCIPFEISLGGLGGGL
        ISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHDVEQILHSFLWKGHENGWSGTKVAWSE                
Subjt:  ISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHDVEQILHSFLWKGHENGWSGTKVAWSEVCIPFEISLGGLGGGL

Query:  YSSGRDCIWIIRACLGSLGVGGILFLSGMLFGLWFSLLLEMIMVVLCGMTLDFQGVRFIRGLVTGLSMMLDWVFMLNARTKREKEARLDEFGGEVAGIYS
                                                                                                            
Subjt:  YSSGRDCIWIIRACLGSLGVGGILFLSGMLFGLWFSLLLEMIMVVLCGMTLDFQGVRFIRGLVTGLSMMLDWVFMLNARTKREKEARLDEFGGEVAGIYS

Query:  CAELISTSSGLFSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTGQESWDNLFFECPFSWEVWSSMIA
            ISTSSGLFSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTGQESWDNLFFECPFSWEVWSSMIA
Subjt:  CAELISTSSGLFSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTGQESWDNLFFECPFSWEVWSSMIA

Query:  WAGSSRRISYWSTELP
        WAGSSRRISYWSTELP
Subjt:  WAGSSRRISYWSTELP

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein3.0e-0422.9Show/hide
Query:  SVSLSGALEGYFPGRRDLRQGDHFSPYLFVIAMEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRD----QGSLSFIKDVS------VSFED
        ++ L+G     FP +   RQG   SP LF I +EVL+R + +           E+V L    F DD+++         Q  L  I + S      ++ + 
Subjt:  SVSLSGALEGYFPGRRDLRQGDHFSPYLFVIAMEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRD----QGSLSFIKDVS------VSFED

Query:  SEELVFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLS--RRISHHDCKPLLERIICRVRNWSARMLSFASWLLLIR--LVPQSFQVYWASVFILPAR
        S+  ++        E ++   L F++ S  ++YLG+ L    + +   + KPLL+ I      W     S+   + +++  ++P+    + A    LP  
Subjt:  SEELVFGMGLPVVEEDRLAAFLGFSVVSLLVRYLGVLLLS--RRISHHDCKPLLERIICRVRNWSARMLSFASWLLLIR--LVPQSFQVYWASVFILPAR

Query:  VLHDVEQILHSFLW
           ++E+    F+W
Subjt:  VLHDVEQILHSFLW

P0C2F6 Putative ribonuclease H protein At1g657505.8e-0834.31Show/hide
Query:  LLSRRISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHDVEQILHSFLWKGHENGWSGTKVAWSEVCIPFEISLGG
        +L +RI+      +LER+  R+  W  + LSFA  L L + V  S  V+  S  +LP  +L+ ++Q+  +FLW           V WS+VC P +   GG
Subjt:  LLSRRISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHDVEQILHSFLWKGHENGWSGTKVAWSEVCIPFEISLGG

Query:  LG
        LG
Subjt:  LG

P92555 Uncharacterized mitochondrial protein AtMg012506.6e-0438.24Show/hide
Query:  LSGALEGYFPGRRDLRQGDHFSPYLFVIAMEVLSRVLNKAPS-----GFRFHPKCEQVGLMHLCFLDD
        ++GA +G     R LRQGD  SPYLF++  EVLS +  +A       G R      ++   HL F DD
Subjt:  LSGALEGYFPGRRDLRQGDHFSPYLFVIAMEVLSRVLNKAPS-----GFRFHPKCEQVGLMHLCFLDD

Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.3e-1744.32Show/hide
Query:  SGLFSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTG-QESWDNLFFECPFSWEVW
        S +FS +     L P    VPW+  VWF  ++PKH+FI W+   +RL TRDRL  W  S+   C+ C    ES  +LFFECPF   VW
Subjt:  SGLFSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTG-QESWDNLFFECPFSWEVW

AT1G60720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.3e-1542.35Show/hide
Query:  FSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTGQ-ESWDNLFFECPFSWEVW
        FS +   D +RP  P + W   VWF G +PKH+F  W++  DRL TR RL  W +     C  CT + ES D+L F C F+ +VW
Subjt:  FSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTGQ-ESWDNLFFECPFSWEVW

AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.3e-1748.68Show/hide
Query:  LRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFC-TGQESWDNLFFECPFSWEVW
        L P+   V WF  +WF G IPKH+FIAW+ MR RL T+DR+  W +     C+FC T  E+  +LFF+C F+ EVW
Subjt:  LRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFC-TGQESWDNLFFECPFSWEVW

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.9e-3231.76Show/hide
Query:  FSVVSLLVRYLGVLLLSRRISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHDVEQILHSFLWKGHENGWSGTKVA
        F+  +L VRYLG+ LL+++++  D  PL+E+I  R+  W+AR LSFA  L LI  V  S   +W S F LP+  + +++ I  SFLW G E      KVA
Subjt:  FSVVSLLVRYLGVLLLSRRISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHDVEQILHSFLWKGHENGWSGTKVA

Query:  WSEVCIPFEISLGGLG-GGLYSSGRDCIWII--RACLGSLGVGGIL-------------FLSGMLFGLWFSLLLEMIMVVLCGMTLDFQGVR--FIRGLV
        WS+VC P +   GGLG   L  + +   W I     LGS     IL               +G     WF    ++      G  +D  G R     G+ 
Subjt:  WSEVCIPFEISLGGLG-GGLYSSGRDCIWII--RACLGSLGVGGIL-------------FLSGMLFGLWFSLLLEMIMVVLCGMTLDFQGVR--FIRGLV

Query:  TGLSMMLDWVFMLNARTKREKEARLDEFGGEV--AGIYSCAELISTSSG------LFSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRL
           S+    V     R + +   R+++   EV   G+ S  + +            F+        R  +  V W+  VWF    PK+S +AW+A+++RL
Subjt:  TGLSMMLDWVFMLNARTKREKEARLDEFGGEV--AGIYSCAELISTSSG------LFSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRL

Query:  ATRDRLCRWDYSVMVSCVFCTG-QESWDNLFFECPFSWEV
         T DR+  W+     SCV C    E+ D+LFF CP+S EV
Subjt:  ATRDRLCRWDYSVMVSCVFCTG-QESWDNLFFECPFSWEV

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.9e-1643.18Show/hide
Query:  SGLFSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTG-QESWDNLFFECPFSWEVW
        S  FS       L P    VPW   VWF  ++PKH+FI W+   +RL TRDRL  W  S+   C+ C    +S  +LFFEC FS  VW
Subjt:  SGLFSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTG-QESWDNLFFECPFSWEVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCGGTTTCTTTGAGTGGTGCGCTTGAGGGGTACTTTCCAGGACGTCGTGACTTGCGTCAAGGGGATCATTTTTCCCCATACCTTTTTGTTATAGCCATGGAGGT
GTTGTCTCGGGTGTTGAATAAGGCGCCGTCAGGATTTCGTTTTCATCCGAAGTGTGAACAAGTTGGCCTGATGCACTTGTGTTTTTTAGATGACTTGATGATTTGCTCGT
ATAGGGATCAAGGATCTCTATCTTTTATTAAGGATGTGTCGGTTTCTTTTGAAGATTCGGAAGAGCTCGTTTTCGGGATGGGCCTCCCTGTTGTGGAGGAGGATAGGTTG
GCAGCTTTCTTAGGGTTTTCGGTGGTGTCGCTCCTTGTGCGTTATCTTGGGGTTCTGCTTCTTTCGCGCCGGATTTCTCATCATGATTGTAAGCCTTTGCTTGAGCGGAT
TATCTGTCGTGTTCGGAATTGGTCGGCTAGGATGCTTTCTTTTGCTAGCTGGTTGCTGCTTATTCGGTTGGTTCCGCAGAGTTTCCAGGTCTATTGGGCTAGTGTGTTTA
TCCTTCCGGCTCGTGTTCTTCATGATGTCGAGCAGATTCTGCATTCTTTCTTGTGGAAGGGGCACGAGAACGGATGGTCGGGGACTAAGGTGGCTTGGTCTGAGGTGTGT
ATTCCTTTCGAGATCTCTTTGGGTGGCTTGGGTGGAGGCTTATATTCTTCGGGGCGGGATTGTATTTGGATCATCCGTGCTTGCCTTGGTTCTCTTGGTGTTGGTGGGAT
ATTGTTTCTATCCGGGATGCTTTTTGGCCTCTGGTTCAGTTTGCTATTGGAGATGATCATGGTTGTTTTGTGTGGCATGACACTTGACTTCCAGGGGGTTCGATTTATCC
GAGGTTTGGTGACTGGATTATCTATGATGCTTGACTGGGTGTTTATGCTGAACGCACGCACTAAGCGTGAGAAGGAAGCAAGGCTTGATGAATTTGGTGGAGAAGTTGCT
GGAATTTATAGCTGTGCAGAATTGATTTCGACATCGTCGGGTCTCTTTTCGGTGTCTAATGCGTTGGATGTGCTGCGGCCGGTTAGGCCTCCTGTTCCATGGTTTTCTTT
GGTTTGGTTTGGTGGGAACATTCCGAAGCATTCTTTTATTGCTTGGCTGGCGATGCGTGATCGGCTTGCTACGAGAGATCGTTTATGTCGTTGGGACTATTCTGTTATGG
TTTCCTGTGTGTTTTGTACTGGCCAGGAATCTTGGGACAATCTATTCTTTGAGTGCCCTTTTAGTTGGGAGGTCTGGTCGAGCATGATTGCTTGGGCTGGTTCTTCTCGC
CGGATTTCATATTGGTCTACTGAGCTTCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCGGTTTCTTTGAGTGGTGCGCTTGAGGGGTACTTTCCAGGACGTCGTGACTTGCGTCAAGGGGATCATTTTTCCCCATACCTTTTTGTTATAGCCATGGAGGT
GTTGTCTCGGGTGTTGAATAAGGCGCCGTCAGGATTTCGTTTTCATCCGAAGTGTGAACAAGTTGGCCTGATGCACTTGTGTTTTTTAGATGACTTGATGATTTGCTCGT
ATAGGGATCAAGGATCTCTATCTTTTATTAAGGATGTGTCGGTTTCTTTTGAAGATTCGGAAGAGCTCGTTTTCGGGATGGGCCTCCCTGTTGTGGAGGAGGATAGGTTG
GCAGCTTTCTTAGGGTTTTCGGTGGTGTCGCTCCTTGTGCGTTATCTTGGGGTTCTGCTTCTTTCGCGCCGGATTTCTCATCATGATTGTAAGCCTTTGCTTGAGCGGAT
TATCTGTCGTGTTCGGAATTGGTCGGCTAGGATGCTTTCTTTTGCTAGCTGGTTGCTGCTTATTCGGTTGGTTCCGCAGAGTTTCCAGGTCTATTGGGCTAGTGTGTTTA
TCCTTCCGGCTCGTGTTCTTCATGATGTCGAGCAGATTCTGCATTCTTTCTTGTGGAAGGGGCACGAGAACGGATGGTCGGGGACTAAGGTGGCTTGGTCTGAGGTGTGT
ATTCCTTTCGAGATCTCTTTGGGTGGCTTGGGTGGAGGCTTATATTCTTCGGGGCGGGATTGTATTTGGATCATCCGTGCTTGCCTTGGTTCTCTTGGTGTTGGTGGGAT
ATTGTTTCTATCCGGGATGCTTTTTGGCCTCTGGTTCAGTTTGCTATTGGAGATGATCATGGTTGTTTTGTGTGGCATGACACTTGACTTCCAGGGGGTTCGATTTATCC
GAGGTTTGGTGACTGGATTATCTATGATGCTTGACTGGGTGTTTATGCTGAACGCACGCACTAAGCGTGAGAAGGAAGCAAGGCTTGATGAATTTGGTGGAGAAGTTGCT
GGAATTTATAGCTGTGCAGAATTGATTTCGACATCGTCGGGTCTCTTTTCGGTGTCTAATGCGTTGGATGTGCTGCGGCCGGTTAGGCCTCCTGTTCCATGGTTTTCTTT
GGTTTGGTTTGGTGGGAACATTCCGAAGCATTCTTTTATTGCTTGGCTGGCGATGCGTGATCGGCTTGCTACGAGAGATCGTTTATGTCGTTGGGACTATTCTGTTATGG
TTTCCTGTGTGTTTTGTACTGGCCAGGAATCTTGGGACAATCTATTCTTTGAGTGCCCTTTTAGTTGGGAGGTCTGGTCGAGCATGATTGCTTGGGCTGGTTCTTCTCGC
CGGATTTCATATTGGTCTACTGAGCTTCCCTAG
Protein sequenceShow/hide protein sequence
MFSVSLSGALEGYFPGRRDLRQGDHFSPYLFVIAMEVLSRVLNKAPSGFRFHPKCEQVGLMHLCFLDDLMICSYRDQGSLSFIKDVSVSFEDSEELVFGMGLPVVEEDRL
AAFLGFSVVSLLVRYLGVLLLSRRISHHDCKPLLERIICRVRNWSARMLSFASWLLLIRLVPQSFQVYWASVFILPARVLHDVEQILHSFLWKGHENGWSGTKVAWSEVC
IPFEISLGGLGGGLYSSGRDCIWIIRACLGSLGVGGILFLSGMLFGLWFSLLLEMIMVVLCGMTLDFQGVRFIRGLVTGLSMMLDWVFMLNARTKREKEARLDEFGGEVA
GIYSCAELISTSSGLFSVSNALDVLRPVRPPVPWFSLVWFGGNIPKHSFIAWLAMRDRLATRDRLCRWDYSVMVSCVFCTGQESWDNLFFECPFSWEVWSSMIAWAGSSR
RISYWSTELP