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Moc04g18980 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g18980
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationchr4:13881198..13885688
RNA-Seq ExpressionMoc04g18980
SyntenyMoc04g18980
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]1.9e-3549.12Show/hide
Query:  EDAQAMDCPHVSRDSEYDIEPLEHSDSSTVEIYYQ--IAPGAILEDTPPATLQEQEGTSGPVDVPNEATEESFSSSSSKGKSLSLSSLNVYDPNFVATAE
        ED    + P      E++ E  ++ D S  E+  +  +     +++ PP   +EQEGTSGPVDVP+EA EES SSSSS+G                    
Subjt:  EDAQAMDCPHVSRDSEYDIEPLEHSDSSTVEIYYQ--IAPGAILEDTPPATLQEQEGTSGPVDVPNEATEESFSSSSSKGKSLSLSSLNVYDPNFVATAE

Query:  NSEKEVCLAQVVKKTRKKKNVAEIAPSAISRPKTRAAVARLTAQKKAKAGPSKKAKRARVPRGVEEPLEEANVKEHDSTEQTPSRVKRVRLEVRRPDFTA
                                   A+SRP+TR AVARL AQK+A+AGPSKKAK ARV R  EEPLEEAN +E DSTEQTPSRVKRVRLEVRRP FT 
Subjt:  NSEKEVCLAQVVKKTRKKKNVAEIAPSAISRPKTRAAVARLTAQKKAKAGPSKKAKRARVPRGVEEPLEEANVKEHDSTEQTPSRVKRVRLEVRRPDFTA

Query:  HDILVERDFDEAQKPVPEYVRRWLVENG
         DIL+ER FDEAQ+PVPEYVR+ +VENG
Subjt:  HDILVERDFDEAQKPVPEYVRRWLVENG

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]9.2e-2781.33Show/hide
Query:  MNRNSQDPPPPKNPPVNGDMVGEGVVNRVGEVPNSILLADNRDVAMQNYVTHAFHNLNSGISNPLPQAAQFDLKP
        MNRN+QDPPPP+NPPVNGDM GEG  NR GE+PN ILLADNRDVAM+NYVT AFHNLNSGI+N LPQAAQ +LKP
Subjt:  MNRNSQDPPPPKNPPVNGDMVGEGVVNRVGEVPNSILLADNRDVAMQNYVTHAFHNLNSGISNPLPQAAQFDLKP

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]3.4e-2954.55Show/hide
Query:  MNRNSQDPPPPKNPPVNGDMVGEGVVNRVGEVPNSILLADNRDVAMQNYVTHAFHNLNSGISNPLPQAAQFDLKPCKDLAKRARTKFHHHVGGTDGEIFA
        MNRN+QDPPPP+NPPVNGDM GE   NRVGE+PN ILLADNRDVAM+NYVTHAFHNLNSGI+NPLPQAAQF+LKP                         
Subjt:  MNRNSQDPPPPKNPPVNGDMVGEGVVNRVGEVPNSILLADNRDVAMQNYVTHAFHNLNSGISNPLPQAAQFDLKPCKDLAKRARTKFHHHVGGTDGEIFA

Query:  KYHTLTRRMKQFKKLVNV-----LKSYLEDAQAMDCPHVSRDS
            + + M QF  L N      LKS++E A A   P  S D+
Subjt:  KYHTLTRRMKQFKKLVNV-----LKSYLEDAQAMDCPHVSRDS

XP_022156786.1 uncharacterized protein LOC111023620 [Momordica charantia]8.6e-4965.76Show/hide
Query:  EDTPPATLQEQEGTSGPVDVPNEATEESFSSSSSKGKSLSLSSLNVYDPNFVATAENSEKEVCLAQVVKKTRKKKNVAEIAPSAISRPKTRAAVARLTAQ
        +D   + +QEQEG SG VDVPNEA EES SSSSSKGKS SLSSLNV DPNFVA A  SE++VCL +VVKK R KKN+ EI P A SRP TRA +A L AQ
Subjt:  EDTPPATLQEQEGTSGPVDVPNEATEESFSSSSSKGKSLSLSSLNVYDPNFVATAENSEKEVCLAQVVKKTRKKKNVAEIAPSAISRPKTRAAVARLTAQ

Query:  KKAKAGPSKKAKRARVPRGVEEPLEEANVKEHDSTEQTPSRVKRVRLEVRRPDFTAHDILVERDFDEAQKPVPEYVRRWLVENG
        K+A+AGP KKAKR +  R  EEPL+E N +E DS EQTPS+ KRVR EV+R +FTA +ILVE+ FDEAQ+PVP+Y++R L+ENG
Subjt:  KKAKAGPSKKAKRARVPRGVEEPLEEANVKEHDSTEQTPSRVKRVRLEVRRPDFTAHDILVERDFDEAQKPVPEYVRRWLVENG

XP_022156935.1 uncharacterized protein LOC111023761 [Momordica charantia]4.1e-2747.72Show/hide
Query:  GEIFAKYHTLTR--------RMKQFKKL-----VNVLKSYLEDAQAMDCPHVSRDSEYDIEPLEHSDSSTVEIYYQIAPGAILEDTPPATL---------
        G+ FA++H ++R        +++  +KL     VN ++S+L  A       VS DSE+D+EPLEHSDS+TV+I  QIAP  I+ +TPPATL         
Subjt:  GEIFAKYHTLTR--------RMKQFKKL-----VNVLKSYLEDAQAMDCPHVSRDSEYDIEPLEHSDSSTVEIYYQIAPGAILEDTPPATL---------

Query:  ----------------------QEQEGTSGPVDVPNEATEESFSSSSSKGKSLSLSSLNVYDPNFVATAENSEKEVCLAQVVKKTRKKKNVAEIAPS
                              QEQEGTSGP+DV +EA EES SSS S+ K+ SLSSLNV DPNFVATAE S++EV L +VVKKT+KKK VAEI P+
Subjt:  ----------------------QEQEGTSGPVDVPNEATEESFSSSSSKGKSLSLSSLNVYDPNFVATAENSEKEVCLAQVVKKTRKKKNVAEIAPS

XP_022158314.1 uncharacterized protein LOC111024824 [Momordica charantia]1.9e-1669.7Show/hide
Query:  MNRNSQDPPPPKNPPVNGDMVGEGVVNRVGEVPNSILLADNRDVAMQNYVTHAFHNLNSGISNPLP
        MN N QDPP P NPPV+GD  GEG  NR GEVPN ILL DNRDVA++NYVTHAFHNLNS + +  P
Subjt:  MNRNSQDPPPPKNPPVNGDMVGEGVVNRVGEVPNSILLADNRDVAMQNYVTHAFHNLNSGISNPLP

TrEMBL top hitse value%identityAlignment
A0A6J1DFT9 uncharacterized protein K02A2.6-like1.2e-1677.92Show/hide
Query:  ESFSSSSSKGKSLSLSSLNVYDPNFVATAENSEKEVCLAQVVKKTRKKKNVAEIAPSAISRPKTRAAVARLTAQKKA
        E  SS SS+GK+ SLSSLNV DPNFVAT E S KEVCL +VVKKTRKKKNVAEIAPSAISR +TRAAVA L AQK+A
Subjt:  ESFSSSSSKGKSLSLSSLNVYDPNFVATAENSEKEVCLAQVVKKTRKKKNVAEIAPSAISRPKTRAAVARLTAQKKA

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220079.0e-3649.12Show/hide
Query:  EDAQAMDCPHVSRDSEYDIEPLEHSDSSTVEIYYQ--IAPGAILEDTPPATLQEQEGTSGPVDVPNEATEESFSSSSSKGKSLSLSSLNVYDPNFVATAE
        ED    + P      E++ E  ++ D S  E+  +  +     +++ PP   +EQEGTSGPVDVP+EA EES SSSSS+G                    
Subjt:  EDAQAMDCPHVSRDSEYDIEPLEHSDSSTVEIYYQ--IAPGAILEDTPPATLQEQEGTSGPVDVPNEATEESFSSSSSKGKSLSLSSLNVYDPNFVATAE

Query:  NSEKEVCLAQVVKKTRKKKNVAEIAPSAISRPKTRAAVARLTAQKKAKAGPSKKAKRARVPRGVEEPLEEANVKEHDSTEQTPSRVKRVRLEVRRPDFTA
                                   A+SRP+TR AVARL AQK+A+AGPSKKAK ARV R  EEPLEEAN +E DSTEQTPSRVKRVRLEVRRP FT 
Subjt:  NSEKEVCLAQVVKKTRKKKNVAEIAPSAISRPKTRAAVARLTAQKKAKAGPSKKAKRARVPRGVEEPLEEANVKEHDSTEQTPSRVKRVRLEVRRPDFTA

Query:  HDILVERDFDEAQKPVPEYVRRWLVENG
         DIL+ER FDEAQ+PVPEYVR+ +VENG
Subjt:  HDILVERDFDEAQKPVPEYVRRWLVENG

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220074.5e-2781.33Show/hide
Query:  MNRNSQDPPPPKNPPVNGDMVGEGVVNRVGEVPNSILLADNRDVAMQNYVTHAFHNLNSGISNPLPQAAQFDLKP
        MNRN+QDPPPP+NPPVNGDM GEG  NR GE+PN ILLADNRDVAM+NYVT AFHNLNSGI+N LPQAAQ +LKP
Subjt:  MNRNSQDPPPPKNPPVNGDMVGEGVVNRVGEVPNSILLADNRDVAMQNYVTHAFHNLNSGISNPLPQAAQFDLKP

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220071.6e-2954.55Show/hide
Query:  MNRNSQDPPPPKNPPVNGDMVGEGVVNRVGEVPNSILLADNRDVAMQNYVTHAFHNLNSGISNPLPQAAQFDLKPCKDLAKRARTKFHHHVGGTDGEIFA
        MNRN+QDPPPP+NPPVNGDM GE   NRVGE+PN ILLADNRDVAM+NYVTHAFHNLNSGI+NPLPQAAQF+LKP                         
Subjt:  MNRNSQDPPPPKNPPVNGDMVGEGVVNRVGEVPNSILLADNRDVAMQNYVTHAFHNLNSGISNPLPQAAQFDLKPCKDLAKRARTKFHHHVGGTDGEIFA

Query:  KYHTLTRRMKQFKKLVNV-----LKSYLEDAQAMDCPHVSRDS
            + + M QF  L N      LKS++E A A   P  S D+
Subjt:  KYHTLTRRMKQFKKLVNV-----LKSYLEDAQAMDCPHVSRDS

A0A6J1DRR9 uncharacterized protein LOC1110237612.0e-2747.72Show/hide
Query:  GEIFAKYHTLTR--------RMKQFKKL-----VNVLKSYLEDAQAMDCPHVSRDSEYDIEPLEHSDSSTVEIYYQIAPGAILEDTPPATL---------
        G+ FA++H ++R        +++  +KL     VN ++S+L  A       VS DSE+D+EPLEHSDS+TV+I  QIAP  I+ +TPPATL         
Subjt:  GEIFAKYHTLTR--------RMKQFKKL-----VNVLKSYLEDAQAMDCPHVSRDSEYDIEPLEHSDSSTVEIYYQIAPGAILEDTPPATL---------

Query:  ----------------------QEQEGTSGPVDVPNEATEESFSSSSSKGKSLSLSSLNVYDPNFVATAENSEKEVCLAQVVKKTRKKKNVAEIAPS
                              QEQEGTSGP+DV +EA EES SSS S+ K+ SLSSLNV DPNFVATAE S++EV L +VVKKT+KKK VAEI P+
Subjt:  ----------------------QEQEGTSGPVDVPNEATEESFSSSSSKGKSLSLSSLNVYDPNFVATAENSEKEVCLAQVVKKTRKKKNVAEIAPS

A0A6J1DW11 uncharacterized protein LOC1110236204.2e-4965.76Show/hide
Query:  EDTPPATLQEQEGTSGPVDVPNEATEESFSSSSSKGKSLSLSSLNVYDPNFVATAENSEKEVCLAQVVKKTRKKKNVAEIAPSAISRPKTRAAVARLTAQ
        +D   + +QEQEG SG VDVPNEA EES SSSSSKGKS SLSSLNV DPNFVA A  SE++VCL +VVKK R KKN+ EI P A SRP TRA +A L AQ
Subjt:  EDTPPATLQEQEGTSGPVDVPNEATEESFSSSSSKGKSLSLSSLNVYDPNFVATAENSEKEVCLAQVVKKTRKKKNVAEIAPSAISRPKTRAAVARLTAQ

Query:  KKAKAGPSKKAKRARVPRGVEEPLEEANVKEHDSTEQTPSRVKRVRLEVRRPDFTAHDILVERDFDEAQKPVPEYVRRWLVENG
        K+A+AGP KKAKR +  R  EEPL+E N +E DS EQTPS+ KRVR EV+R +FTA +ILVE+ FDEAQ+PVP+Y++R L+ENG
Subjt:  KKAKAGPSKKAKRARVPRGVEEPLEEANVKEHDSTEQTPSRVKRVRLEVRRPDFTAHDILVERDFDEAQKPVPEYVRRWLVENG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAGAAACTCACAAGATCCTCCACCTCCAAAAAATCCACCTGTGAATGGAGATATGGTAGGTGAAGGAGTAGTAAACCGAGTAGGAGAAGTGCCTAATTCGATCCT
TCTAGCAGACAATCGAGATGTAGCCATGCAGAACTATGTCACTCATGCATTCCACAACTTAAATTCAGGGATAAGTAATCCTTTACCCCAAGCCGCACAGTTCGACCTTA
AGCCATGCAAGGACTTGGCTAAACGCGCTAGAACCAAATTCCACCACCACGTGGGCGGAACTGACGGAGAAATTTTTGCAAAGTACCACACTTTAACCAGGAGAATGAAA
CAGTTCAAGAAGCTTGTGAACGTTTTAAAGAGTTACTTAGAAGATGCTCAAGCCATGGATTGCCCGCATGTTAGTAGAGACTCAGAATACGACATAGAACCCTTGGAGCA
TTCAGATTCATCCACGGTCGAAATATACTATCAAATTGCGCCTGGTGCAATTTTGGAGGATACTCCACCAGCGACTTTACAAGAACAAGAAGGAACATCCGGCCCTGTGG
ATGTCCCTAATGAGGCCACAGAAGAATCCTTTTCATCTTCTTCTTCAAAAGGTAAGTCTCTTTCTTTATCAAGTTTGAATGTTTATGACCCCAACTTTGTTGCTACTGCA
GAGAACTCAGAGAAGGAGGTGTGCTTGGCCCAAGTGGTGAAGAAAACACGAAAGAAGAAAAATGTTGCAGAAATTGCGCCTAGTGCAATTTCCAGGCCAAAGACCCGAGC
CGCTGTAGCACGTTTGACTGCCCAAAAAAAGGCCAAAGCTGGTCCATCTAAAAAAGCCAAGAGGGCTAGGGTGCCAAGAGGGGTAGAAGAGCCACTTGAGGAGGCTAACG
TAAAGGAGCATGATTCTACCGAACAAACACCATCAAGAGTCAAAAGGGTGAGATTGGAAGTGAGAAGGCCCGACTTCACAGCACATGATATTCTAGTTGAGAGGGACTTT
GATGAAGCACAAAAGCCCGTCCCAGAATATGTTAGGAGGTGGCTTGTGGAGAATGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATAGAAACTCACAAGATCCTCCACCTCCAAAAAATCCACCTGTGAATGGAGATATGGTAGGTGAAGGAGTAGTAAACCGAGTAGGAGAAGTGCCTAATTCGATCCT
TCTAGCAGACAATCGAGATGTAGCCATGCAGAACTATGTCACTCATGCATTCCACAACTTAAATTCAGGGATAAGTAATCCTTTACCCCAAGCCGCACAGTTCGACCTTA
AGCCATGCAAGGACTTGGCTAAACGCGCTAGAACCAAATTCCACCACCACGTGGGCGGAACTGACGGAGAAATTTTTGCAAAGTACCACACTTTAACCAGGAGAATGAAA
CAGTTCAAGAAGCTTGTGAACGTTTTAAAGAGTTACTTAGAAGATGCTCAAGCCATGGATTGCCCGCATGTTAGTAGAGACTCAGAATACGACATAGAACCCTTGGAGCA
TTCAGATTCATCCACGGTCGAAATATACTATCAAATTGCGCCTGGTGCAATTTTGGAGGATACTCCACCAGCGACTTTACAAGAACAAGAAGGAACATCCGGCCCTGTGG
ATGTCCCTAATGAGGCCACAGAAGAATCCTTTTCATCTTCTTCTTCAAAAGGTAAGTCTCTTTCTTTATCAAGTTTGAATGTTTATGACCCCAACTTTGTTGCTACTGCA
GAGAACTCAGAGAAGGAGGTGTGCTTGGCCCAAGTGGTGAAGAAAACACGAAAGAAGAAAAATGTTGCAGAAATTGCGCCTAGTGCAATTTCCAGGCCAAAGACCCGAGC
CGCTGTAGCACGTTTGACTGCCCAAAAAAAGGCCAAAGCTGGTCCATCTAAAAAAGCCAAGAGGGCTAGGGTGCCAAGAGGGGTAGAAGAGCCACTTGAGGAGGCTAACG
TAAAGGAGCATGATTCTACCGAACAAACACCATCAAGAGTCAAAAGGGTGAGATTGGAAGTGAGAAGGCCCGACTTCACAGCACATGATATTCTAGTTGAGAGGGACTTT
GATGAAGCACAAAAGCCCGTCCCAGAATATGTTAGGAGGTGGCTTGTGGAGAATGGTTGA
Protein sequenceShow/hide protein sequence
MNRNSQDPPPPKNPPVNGDMVGEGVVNRVGEVPNSILLADNRDVAMQNYVTHAFHNLNSGISNPLPQAAQFDLKPCKDLAKRARTKFHHHVGGTDGEIFAKYHTLTRRMK
QFKKLVNVLKSYLEDAQAMDCPHVSRDSEYDIEPLEHSDSSTVEIYYQIAPGAILEDTPPATLQEQEGTSGPVDVPNEATEESFSSSSSKGKSLSLSSLNVYDPNFVATA
ENSEKEVCLAQVVKKTRKKKNVAEIAPSAISRPKTRAAVARLTAQKKAKAGPSKKAKRARVPRGVEEPLEEANVKEHDSTEQTPSRVKRVRLEVRRPDFTAHDILVERDF
DEAQKPVPEYVRRWLVENG