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Moc04g19170 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g19170
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr4:14111475..14113200
RNA-Seq ExpressionMoc04g19170
SyntenyMoc04g19170
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065364.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]7.8e-1857.73Show/hide
Query:  DANPTTDPLTVPGGPITRSKAKKIQEVFIIHLQRLANAHEETKISEAKILYNVNSMSQEENGAKMAREKLSILRDGTEDKKSVQIGEQVPLQIAPLG
        D +   + L VP G IT+ KAKKIQE F +H+Q+LANA  ETK  E K LYNV+S SQEE+  KMAREKL  L DGT ++KSVQ  E+V +Q+A LG
Subjt:  DANPTTDPLTVPGGPITRSKAKKIQEVFIIHLQRLANAHEETKISEAKILYNVNSMSQEENGAKMAREKLSILRDGTEDKKSVQIGEQVPLQIAPLG

TYK02449.1 F15O4.13 [Cucumis melo var. makuwa]8.6e-1761.9Show/hide
Query:  DANPTTDPLTVPGGPITRSKAKKIQEVFIIHLQRLANAHEETKISEAKILYNVNSMSQEENGAKMAREKLSILRDGTEDKKSVQ
        D +   + L VP GPIT+ KAKKIQE F +H+Q+LANA  ETK  E K LYNV+S SQEE+G KMAREKL  L DGT ++KSVQ
Subjt:  DANPTTDPLTVPGGPITRSKAKKIQEVFIIHLQRLANAHEETKISEAKILYNVNSMSQEENGAKMAREKLSILRDGTEDKKSVQ

TYK20861.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]7.8e-1857.73Show/hide
Query:  DANPTTDPLTVPGGPITRSKAKKIQEVFIIHLQRLANAHEETKISEAKILYNVNSMSQEENGAKMAREKLSILRDGTEDKKSVQIGEQVPLQIAPLG
        D +   + L VP G IT+ KAKKIQE F +H+Q+LANA  ETK  E K LYNV+S SQEE+  KMAREKL  L DGT ++KSVQ  E+V +Q+A LG
Subjt:  DANPTTDPLTVPGGPITRSKAKKIQEVFIIHLQRLANAHEETKISEAKILYNVNSMSQEENGAKMAREKLSILRDGTEDKKSVQIGEQVPLQIAPLG

XP_022153198.1 uncharacterized protein LOC111020753 [Momordica charantia]1.9e-24100Show/hide
Query:  DGVPQVPQDPNMVILQAIQGMMEMMMEDRQERRAQQQREERALQEDDAFDLAEQERQVGGRRNGRGR
        DGVPQVPQDPNMVILQAIQGMMEMMMEDRQERRAQQQREERALQEDDAFDLAEQERQVGGRRNGRGR
Subjt:  DGVPQVPQDPNMVILQAIQGMMEMMMEDRQERRAQQQREERALQEDDAFDLAEQERQVGGRRNGRGR

XP_022158838.1 uncharacterized protein LOC111025303 [Momordica charantia]9.5e-2498.51Show/hide
Query:  DGVPQVPQDPNMVILQAIQGMMEMMMEDRQERRAQQQREERALQEDDAFDLAEQERQVGGRRNGRGR
        DGVPQVPQDPN VILQAIQGMMEMMMEDRQERRAQQQREERALQEDDAFDLAEQERQVGGRRNGRGR
Subjt:  DGVPQVPQDPNMVILQAIQGMMEMMMEDRQERRAQQQREERALQEDDAFDLAEQERQVGGRRNGRGR

TrEMBL top hitse value%identityAlignment
A0A5A7VDK8 Transposon Ty3-I Gag-Pol polyprotein3.8e-1857.73Show/hide
Query:  DANPTTDPLTVPGGPITRSKAKKIQEVFIIHLQRLANAHEETKISEAKILYNVNSMSQEENGAKMAREKLSILRDGTEDKKSVQIGEQVPLQIAPLG
        D +   + L VP G IT+ KAKKIQE F +H+Q+LANA  ETK  E K LYNV+S SQEE+  KMAREKL  L DGT ++KSVQ  E+V +Q+A LG
Subjt:  DANPTTDPLTVPGGPITRSKAKKIQEVFIIHLQRLANAHEETKISEAKILYNVNSMSQEENGAKMAREKLSILRDGTEDKKSVQIGEQVPLQIAPLG

A0A5D3BWE8 F15O4.134.2e-1761.9Show/hide
Query:  DANPTTDPLTVPGGPITRSKAKKIQEVFIIHLQRLANAHEETKISEAKILYNVNSMSQEENGAKMAREKLSILRDGTEDKKSVQ
        D +   + L VP GPIT+ KAKKIQE F +H+Q+LANA  ETK  E K LYNV+S SQEE+G KMAREKL  L DGT ++KSVQ
Subjt:  DANPTTDPLTVPGGPITRSKAKKIQEVFIIHLQRLANAHEETKISEAKILYNVNSMSQEENGAKMAREKLSILRDGTEDKKSVQ

A0A5D3DB73 Transposon Ty3-I Gag-Pol polyprotein3.8e-1857.73Show/hide
Query:  DANPTTDPLTVPGGPITRSKAKKIQEVFIIHLQRLANAHEETKISEAKILYNVNSMSQEENGAKMAREKLSILRDGTEDKKSVQIGEQVPLQIAPLG
        D +   + L VP G IT+ KAKKIQE F +H+Q+LANA  ETK  E K LYNV+S SQEE+  KMAREKL  L DGT ++KSVQ  E+V +Q+A LG
Subjt:  DANPTTDPLTVPGGPITRSKAKKIQEVFIIHLQRLANAHEETKISEAKILYNVNSMSQEENGAKMAREKLSILRDGTEDKKSVQIGEQVPLQIAPLG

A0A6J1DGU9 uncharacterized protein LOC1110207539.3e-25100Show/hide
Query:  DGVPQVPQDPNMVILQAIQGMMEMMMEDRQERRAQQQREERALQEDDAFDLAEQERQVGGRRNGRGR
        DGVPQVPQDPNMVILQAIQGMMEMMMEDRQERRAQQQREERALQEDDAFDLAEQERQVGGRRNGRGR
Subjt:  DGVPQVPQDPNMVILQAIQGMMEMMMEDRQERRAQQQREERALQEDDAFDLAEQERQVGGRRNGRGR

A0A6J1DX75 uncharacterized protein LOC1110253034.6e-2498.51Show/hide
Query:  DGVPQVPQDPNMVILQAIQGMMEMMMEDRQERRAQQQREERALQEDDAFDLAEQERQVGGRRNGRGR
        DGVPQVPQDPN VILQAIQGMMEMMMEDRQERRAQQQREERALQEDDAFDLAEQERQVGGRRNGRGR
Subjt:  DGVPQVPQDPNMVILQAIQGMMEMMMEDRQERRAQQQREERALQEDDAFDLAEQERQVGGRRNGRGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGGGCGATTAGGGCCAAATTCGGATTCTGAATCCTACTCCGAATCTTGGGTATGTGATGCAAATCCAACCACGGATCCATTGACTGTACCCGGGGGACCAATTAC
AAGAAGCAAAGCAAAGAAGATTCAAGAGGTTTTCATAATACATCTTCAAAGGCTAGCTAATGCACACGAGGAGACAAAGATTTCTGAGGCAAAAATTCTTTACAATGTTA
ATTCAATGAGTCAAGAAGAGAATGGAGCAAAGATGGCACGGGAAAAGTTGTCTATTTTGAGAGATGGCACGGAGGACAAAAAAAGTGTGCAGATTGGTGAACAGGTGCCT
TTGCAGATTGCACCTCTTGGGAGTTTGTTTGATGTTAAACCGATTCATTGGATTAGTCTCGATCAAGCTAATTCTGGAGATGGAGTACCACAAGTACCGCAAGATCCTAA
CATGGTGATTCTTCAAGCAATTCAAGGAATGATGGAAATGATGATGGAAGATAGACAAGAAAGGAGAGCGCAACAACAAAGAGAAGAACGAGCCTTACAAGAAGATGATG
CGTTTGACCTTGCTGAACAAGAAAGACAAGTTGGAGGAAGAAGAAATGGGAGAGGAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGGGCGATTAGGGCCAAATTCGGATTCTGAATCCTACTCCGAATCTTGGGTATGTGATGCAAATCCAACCACGGATCCATTGACTGTACCCGGGGGACCAATTAC
AAGAAGCAAAGCAAAGAAGATTCAAGAGGTTTTCATAATACATCTTCAAAGGCTAGCTAATGCACACGAGGAGACAAAGATTTCTGAGGCAAAAATTCTTTACAATGTTA
ATTCAATGAGTCAAGAAGAGAATGGAGCAAAGATGGCACGGGAAAAGTTGTCTATTTTGAGAGATGGCACGGAGGACAAAAAAAGTGTGCAGATTGGTGAACAGGTGCCT
TTGCAGATTGCACCTCTTGGGAGTTTGTTTGATGTTAAACCGATTCATTGGATTAGTCTCGATCAAGCTAATTCTGGAGATGGAGTACCACAAGTACCGCAAGATCCTAA
CATGGTGATTCTTCAAGCAATTCAAGGAATGATGGAAATGATGATGGAAGATAGACAAGAAAGGAGAGCGCAACAACAAAGAGAAGAACGAGCCTTACAAGAAGATGATG
CGTTTGACCTTGCTGAACAAGAAAGACAAGTTGGAGGAAGAAGAAATGGGAGAGGAAGATGA
Protein sequenceShow/hide protein sequence
MPGRLGPNSDSESYSESWVCDANPTTDPLTVPGGPITRSKAKKIQEVFIIHLQRLANAHEETKISEAKILYNVNSMSQEENGAKMAREKLSILRDGTEDKKSVQIGEQVP
LQIAPLGSLFDVKPIHWISLDQANSGDGVPQVPQDPNMVILQAIQGMMEMMMEDRQERRAQQQREERALQEDDAFDLAEQERQVGGRRNGRGR