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Moc04g19290 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g19290
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionMannan endo-1,4-beta-mannosidase
Genome locationchr4:14189698..14192350
RNA-Seq ExpressionMoc04g19290
SyntenyMoc04g19290
Gene Ontology termsGO:0071704 - organic substance metabolic process (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016985 - mannan endo-1,4-beta-mannosidase activity (molecular function)
InterPro domainsIPR017853 - Glycoside hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054032.1 endoglucanase-like [Cucumis melo var. makuwa]8.7e-4474.78Show/hide
Query:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPK-FHQRFQLMQTKLQDPSSNLSTSLLIY
        +PLFVSEFGIDQTG NE Q RFL CFF+YL ENDFDWGLWALQGSYYYREG+KN  ETFGVLD+ F + K+ K FHQ+FQLMQ+KLQDPSSNL+TS ++Y
Subjt:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPK-FHQRFQLMQTKLQDPSSNLSTSLLIY

Query:  HPRSGDCVRMNKSQE
        HP SG CVRMNK  +
Subjt:  HPRSGDCVRMNKSQE

KAE8648503.1 hypothetical protein Csa_009407 [Cucumis sativus]7.1e-4677.19Show/hide
Query:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPKFHQRFQLMQTKLQDPSSNLSTSLLIYH
        +PLFVSEFGI+Q GANE QNRFL+CFF+YL ENDFDWGLWALQGSYYYREG+KN  ETFGVLDA FT VK+PKF Q+FQLMQTKLQDPSSNL+TS ++YH
Subjt:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPKFHQRFQLMQTKLQDPSSNLSTSLLIYH

Query:  PRSGDCVRMNKSQE
        P SG+CV++NK  +
Subjt:  PRSGDCVRMNKSQE

KAE8648505.1 hypothetical protein Csa_007897 [Cucumis sativus]1.9e-4678.07Show/hide
Query:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPKFHQRFQLMQTKLQDPSSNLSTSLLIYH
        +PLFVSEFGI+Q GANE QNRFL+CFF+YL ENDFDWGLWALQGSYYYREG+KN  ETFGVLD+ FT VK+PKF Q+FQLMQTKLQDPSSNL+TS ++YH
Subjt:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPKFHQRFQLMQTKLQDPSSNLSTSLLIYH

Query:  PRSGDCVRMNKSQE
        P SG+CVRMNK  +
Subjt:  PRSGDCVRMNKSQE

KGN50395.1 hypothetical protein Csa_000438 [Cucumis sativus]6.7e-4476.52Show/hide
Query:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPK-FHQRFQLMQTKLQDPSSNLSTSLLIY
        MPLFVSEFGIDQ G NE QNRFL+CFFSYL ENDFDWGLWALQGSYYYREG+KN  E FGVLD+ F + K+ K F QRFQLMQTKLQDPSSN +TSL++Y
Subjt:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPK-FHQRFQLMQTKLQDPSSNLSTSLLIY

Query:  HPRSGDCVRMNKSQE
        HP SG CVRMNK  +
Subjt:  HPRSGDCVRMNKSQE

XP_031739082.1 glycosyl hydrolase 5 family protein [Cucumis sativus]1.6e-4576.32Show/hide
Query:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPKFHQRFQLMQTKLQDPSSNLSTSLLIYH
        +PLFVSEFGI+Q G NE QNRFL+CFF+YL +NDFDWGLWALQGSYYYREG+KN  ETFGVLD+ FT VK+PKF Q+FQLMQTKLQDPSSNL+TS ++YH
Subjt:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPKFHQRFQLMQTKLQDPSSNLSTSLLIYH

Query:  PRSGDCVRMNKSQE
        P SG+CVRMNK  +
Subjt:  PRSGDCVRMNKSQE

TrEMBL top hitse value%identityAlignment
A0A0A0KL32 Mannan endo-1,4-beta-mannosidase3.2e-4476.52Show/hide
Query:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPK-FHQRFQLMQTKLQDPSSNLSTSLLIY
        MPLFVSEFGIDQ G NE QNRFL+CFFSYL ENDFDWGLWALQGSYYYREG+KN  E FGVLD+ F + K+ K F QRFQLMQTKLQDPSSN +TSL++Y
Subjt:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPK-FHQRFQLMQTKLQDPSSNLSTSLLIY

Query:  HPRSGDCVRMNKSQE
        HP SG CVRMNK  +
Subjt:  HPRSGDCVRMNKSQE

A0A0A0KNB6 Mannan endo-1,4-beta-mannosidase9.4e-4475.65Show/hide
Query:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPK-FHQRFQLMQTKLQDPSSNLSTSLLIY
        +PLFVSEFGIDQ G NE QNRFL+CFFSYL ENDFDWGLWALQGSYYYREG+KN  E FGVLD+ F + K+ K F QRFQLMQTKLQDPSSN +TSL++Y
Subjt:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPK-FHQRFQLMQTKLQDPSSNLSTSLLIY

Query:  HPRSGDCVRMNKSQE
        HP SG CVRMNK  +
Subjt:  HPRSGDCVRMNKSQE

A0A0A0L6S7 Mannan endo-1,4-beta-mannosidase2.7e-4677.19Show/hide
Query:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPKFHQRFQLMQTKLQDPSSNLSTSLLIYH
        +PLFVSEFGI+Q GANE QNRFL+CFF+YL +NDFDWGLWALQGSYYYREG+KN  ETFGVLD+ FT VK+PKF Q+FQLMQTKLQDPSSNL+TS ++YH
Subjt:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPKFHQRFQLMQTKLQDPSSNLSTSLLIYH

Query:  PRSGDCVRMNKSQE
        P SG+CVRMNK  +
Subjt:  PRSGDCVRMNKSQE

A0A5A7TI19 Mannan endo-1,4-beta-mannosidase9.4e-4474.78Show/hide
Query:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPK-FHQRFQLMQTKLQDPSSNLSTSLLIY
        +PLFVSEFGIDQTG NE QNRFL+CFFSYL ENDFDWGLWALQGSYYY+ G+KN  E FGVLD+NFT+ K+ K F QRFQLMQTKLQDPSSN +TS ++Y
Subjt:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPK-FHQRFQLMQTKLQDPSSNLSTSLLIY

Query:  HPRSGDCVRMNKSQE
        HP SG C+RMNK  +
Subjt:  HPRSGDCVRMNKSQE

A0A5A7UE15 Mannan endo-1,4-beta-mannosidase4.2e-4474.78Show/hide
Query:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPK-FHQRFQLMQTKLQDPSSNLSTSLLIY
        +PLFVSEFGIDQTG NE Q RFL CFF+YL ENDFDWGLWALQGSYYYREG+KN  ETFGVLD+ F + K+ K FHQ+FQLMQ+KLQDPSSNL+TS ++Y
Subjt:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPK-FHQRFQLMQTKLQDPSSNLSTSLLIY

Query:  HPRSGDCVRMNKSQE
        HP SG CVRMNK  +
Subjt:  HPRSGDCVRMNKSQE

SwissProt top hitse value%identityAlignment
C0HLA0 Glycosyl hydrolase 5 family protein4.8e-2143.64Show/hide
Query:  PLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYR---EGMKNVGETFGVLDANFTQVKSPKFHQRFQLMQTKLQDPSSNLSTSL-L
        PLF+SEFGIDQ   N+  NR+L C  +YL E D DW LW + GSYYYR   + +K+  ET+G  + +++++++P F  R + +Q  +QDP         +
Subjt:  PLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYR---EGMKNVGETFGVLDANFTQVKSPKFHQRFQLMQTKLQDPSSNLSTSL-L

Query:  IYHPRSGDCV
        IYHP SG CV
Subjt:  IYHPRSGDCV

Arabidopsis top hitse value%identityAlignment
AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein3.7e-2443.4Show/hide
Query:  PLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPKFHQRFQLMQTKLQDPSSNLSTSLLIYHP
        PLF+SEFGID+ G N   NR+  C   +  END DW LWAL GSYY R+G   + E +GVLD+++  V++  F Q+   +Q+ LQ P        L++HP
Subjt:  PLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPKFHQRFQLMQTKLQDPSSNLSTSLLIYHP

Query:  RSGDCV
         +G C+
Subjt:  RSGDCV

AT3G26130.1 Cellulase (glycosyl hydrolase family 5) protein1.2e-1940.19Show/hide
Query:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPKFHQRFQLMQTKLQDPSSNLSTSLLIYH
        +PLFVSEFGIDQ G N   N+FL+CF +   + D DW LW L GSYY RE      E++GVLD N++ +++    Q    +QT             +++H
Subjt:  MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPKFHQRFQLMQTKLQDPSSNLSTSLLIYH

Query:  PRSGDCV
        P +G C+
Subjt:  PRSGDCV

AT3G26140.1 Cellulase (glycosyl hydrolase family 5) protein9.7e-2544.34Show/hide
Query:  PLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPKFHQRFQLMQTKLQDPSSNLSTSLLIYHP
        P+F+SEFGID  G N   NR++ C   +  END DW +W LQGSYY REG+  + E +G+LD+++ +V+S  F QR  L+ + LQ P S      L++HP
Subjt:  PLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPKFHQRFQLMQTKLQDPSSNLSTSLLIYHP

Query:  RSGDCV
         +G C+
Subjt:  RSGDCV

AT5G16700.1 Glycosyl hydrolase superfamily protein1.0e-1050Show/hide
Query:  PLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREG
        PL +SEFG DQ G +   NR++ C  ++  END DW +WAL G YY R G
Subjt:  PLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREG

AT5G17500.1 Glycosyl hydrolase superfamily protein9.4e-2038.68Show/hide
Query:  PLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPKFHQRFQLMQTKLQDPSSNLSTSLLIYHP
        PLF+SEFG DQ G +   NR++ C  ++  E D DW +WA+ G YY+REG + V E +G+LDAN+  V +  + +R  ++Q     P    +    I+HP
Subjt:  PLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPKFHQRFQLMQTKLQDPSSNLSTSLLIYHP

Query:  RSGDCV
         +G C+
Subjt:  RSGDCV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCTGTTTGTGAGTGAATTTGGGATCGACCAAACTGGAGCAAATGAGCGCCAAAATCGATTCTTGACCTGTTTTTTTTCCTACCTTGTTGAGAATGATTTTGATTG
GGGCTTGTGGGCTTTGCAAGGTAGCTACTACTATAGAGAAGGCATGAAAAACGTTGGAGAAACCTTTGGTGTCTTGGATGCCAATTTTACACAAGTCAAAAGCCCTAAAT
TTCATCAAAGGTTTCAGCTTATGCAAACCAAACTTCAAGATCCAAGTTCAAATCTCTCGACATCGCTCCTAATTTACCATCCTCGTAGTGGCGACTGTGTGAGAATGAAC
AAAAGTCAAGAAGAGAATGGAGCAAAGATGGCACTGGAAAAGTTGTCTATTTTGAGAGATGGCACGGAGGACAAAAAAAGTGTGCAGATTCGTGAACAGGCTTGTAATGC
TCTTGTTATGGATAACTTAAGATTAAAACATATTGAAATTCAAGAACTTTTGTTCCTTAACACTTTTGGTGTTGCTTCTTTCAAATCTTGCTTTAGAGCTGTAAAGGTTA
AAGAGTTGAATTCTGAGAGGGAGTTTACAGTTAATGAGCAGCGCTTAAAGAATTATTGGGGAGAAGGGCTAGTGAGAGATGCAGAGCCCACTAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCTGTTTGTGAGTGAATTTGGGATCGACCAAACTGGAGCAAATGAGCGCCAAAATCGATTCTTGACCTGTTTTTTTTCCTACCTTGTTGAGAATGATTTTGATTG
GGGCTTGTGGGCTTTGCAAGGTAGCTACTACTATAGAGAAGGCATGAAAAACGTTGGAGAAACCTTTGGTGTCTTGGATGCCAATTTTACACAAGTCAAAAGCCCTAAAT
TTCATCAAAGGTTTCAGCTTATGCAAACCAAACTTCAAGATCCAAGTTCAAATCTCTCGACATCGCTCCTAATTTACCATCCTCGTAGTGGCGACTGTGTGAGAATGAAC
AAAAGTCAAGAAGAGAATGGAGCAAAGATGGCACTGGAAAAGTTGTCTATTTTGAGAGATGGCACGGAGGACAAAAAAAGTGTGCAGATTCGTGAACAGGCTTGTAATGC
TCTTGTTATGGATAACTTAAGATTAAAACATATTGAAATTCAAGAACTTTTGTTCCTTAACACTTTTGGTGTTGCTTCTTTCAAATCTTGCTTTAGAGCTGTAAAGGTTA
AAGAGTTGAATTCTGAGAGGGAGTTTACAGTTAATGAGCAGCGCTTAAAGAATTATTGGGGAGAAGGGCTAGTGAGAGATGCAGAGCCCACTAGCTGA
Protein sequenceShow/hide protein sequence
MPLFVSEFGIDQTGANERQNRFLTCFFSYLVENDFDWGLWALQGSYYYREGMKNVGETFGVLDANFTQVKSPKFHQRFQLMQTKLQDPSSNLSTSLLIYHPRSGDCVRMN
KSQEENGAKMALEKLSILRDGTEDKKSVQIREQACNALVMDNLRLKHIEIQELLFLNTFGVASFKSCFRAVKVKELNSEREFTVNEQRLKNYWGEGLVRDAEPTS