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Moc04g20390 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g20390
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr4:14811230..14811511
RNA-Seq ExpressionMoc04g20390
SyntenyMoc04g20390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]7.0e-1459.3Show/hide
Query:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP
        MELSIASRG KD LVP++KK+KKE+K ++KI KS+ KES+V+NTTP KFS       +KKD     G+E+R LTLKERQ+K   FP
Subjt:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]9.1e-1459.3Show/hide
Query:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP
        MELSIASRG KD LVP++KK+KKE+K ++KI KS+ KES+V+NTTP KFS       +KKD     G+E+R LTLKERQ+K   FP
Subjt:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP

XP_031740568.1 uncharacterized protein LOC116403508 [Cucumis sativus]7.0e-1459.3Show/hide
Query:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP
        MELSIASRG KD LVP++KK+KKE+K ++KI KS+ KES+V+NTTP KFS       +KKD     G+E+R LTLKERQ+K   FP
Subjt:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]7.0e-1459.3Show/hide
Query:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP
        MELSIASRG KD LVP++KK+KKE+K ++KI KS+ KES+V+NTTP KFS       +KKD     G+E+R LTLKERQ+K   FP
Subjt:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP

XP_031742390.1 uncharacterized protein LOC116401672 [Cucumis sativus]9.1e-1459.3Show/hide
Query:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP
        MELSIASRG KD LVP++KK+KKE+K ++KI KS+ KES+V+NTTP KFS       +KKD     G+E+R LTLKERQ+K   FP
Subjt:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP

TrEMBL top hitse value%identityAlignment
A0A5A7STA5 Ty3-gypsy retrotransposon protein9.8e-1456.98Show/hide
Query:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP
        MELSIASRG K+  VP+++K+KKE K+++K+ KSS KES+V+NTTP KFS +     +KKD     G+E+R LTLKERQKK   FP
Subjt:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP

A0A5A7UKJ3 Retrotransposon gag protein9.8e-1455.81Show/hide
Query:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP
        MELSI SRG KD LVP+++K KKE K ++KI KS+ KES+++NTTP KFS +     +KKD     G+++RHLTLKERQK    FP
Subjt:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP

A0A5A7V7Z6 Ty3-gypsy retrotransposon protein7.5e-1456.98Show/hide
Query:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP
        MELSIASRG KD  VP+++K+KKE K+++K+ KSS KES+V+NTTP KFS +     +KKD     G+E+R LTLKERQ+K   FP
Subjt:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP

A0A5D3CX95 Ty3-gypsy retrotransposon protein9.8e-1455.81Show/hide
Query:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP
        MELSI SRG KD LVP+++K KKE K ++KI KS+ KES+++NTTP KFS +     +KKD     G+++RHLTLKERQK    FP
Subjt:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP

A0A5D3DWV0 Ty3-gypsy retrotransposon protein7.5e-1456.98Show/hide
Query:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP
        MELSIASRG KD  VP+++K+KKE K+++K+ KSS KES+V+NTTP KFS +     +KKD     G+E+R LTLKERQ+K   FP
Subjt:  MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTAAGTATCGCTAGTCGAGGGAACAAAGATCAACTGGTCCCAGACCTCAAGAAGGAGAAGAAGGAAGTAAAGAACTCTGATAAAATTGCTAAGAGTTCTAAGAA
AGAATCCATCGTCATCAACACGACTCCATTTAAGTTTTCTACGAAAGGAAGAAACTTCAACGACAAAAAGGATGGAAGACAAATGGCTGGAAACGAGAAGCGGCATCTAA
CTTTGAAGGAGAGACAGAAAAAGTCTATTCTTTTCCCTATTCAGATATTCCAGATATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTAAGTATCGCTAGTCGAGGGAACAAAGATCAACTGGTCCCAGACCTCAAGAAGGAGAAGAAGGAAGTAAAGAACTCTGATAAAATTGCTAAGAGTTCTAAGAA
AGAATCCATCGTCATCAACACGACTCCATTTAAGTTTTCTACGAAAGGAAGAAACTTCAACGACAAAAAGGATGGAAGACAAATGGCTGGAAACGAGAAGCGGCATCTAA
CTTTGAAGGAGAGACAGAAAAAGTCTATTCTTTTCCCTATTCAGATATTCCAGATATTTTGA
Protein sequenceShow/hide protein sequence
MELSIASRGNKDQLVPDLKKEKKEVKNSDKIAKSSKKESIVINTTPFKFSTKGRNFNDKKDGRQMAGNEKRHLTLKERQKKSILFPIQIFQIF