; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g20410 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g20410
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:14813053..14816287
RNA-Seq ExpressionMoc04g20410
SyntenyMoc04g20410
Gene Ontology termsNA
InterPro domainsIPR041373 - Reverse transcriptase, RNase H-like domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]1.3e-17738.06Show/hide
Query:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT
        E S N    + E+LKE+FT PLTKI   E +K E   ++ +LP +R  + FDPKAYKL+ KAGYDFTT TE KS++IFD++ ELS TQKKL K GY+IP 
Subjt:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT

Query:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRIEVPIVHQS--------------------------------------
         +AGIGY+ SEPV I  KGK KV N+ HITVEES DS+E K   SQR SVF+RI    +  S                                      
Subjt:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRIEVPIVHQS--------------------------------------

Query:  --------SRSVFYRLKRVENQREPKSESLETSQLDGM-KNNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDE
                 +S F RL  V   R+ K  S+  S    +   +  + S+ PSRMKRK++V +NTEG L+VKR  ++ T P + + E   +   C H++ +E
Subjt:  --------SRSVFYRLKRVENQREPKSESLETSQLDGM-KNNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDE

Query:  MLDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL------------------------------------------------------------------
          D +I EED E AP SLEDG QST+DELKEVNL                                                                  
Subjt:  MLDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------AGKPLVLYITAQE
                                                                                                GKPL+LYI AQE
Subjt:  ---------------------------------------------------------------------------------------AGKPLVLYITAQE

Query:  RSLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYVPQKA
         SLGALLAQE +KGKECALYYLSRTL GAEL+YSPIEKMCL+LFFAIDK+RHYMQAFTIHLVAKADP+KY+LSRP +SGRLAKWAI+LQQYDIVY+PQKA
Subjt:  RSLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYVPQKA

Query:  VKGQAVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL-------------------------
        VKGQA+ADFL DHPVP++WKL + LPDEE+ ++E  EPW M+F+GAARRSGAG GI+FISPEKHMLPYSFT GEL                         
Subjt:  VKGQAVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL-------------------------

Query:  ---------------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAISVYV
                                         +L+  F+++ +EH+PR+ENKKADALANLATALT+ ED  +NI LCQ+WI+P  ES+ EE + ISVY 
Subjt:  ---------------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAISVYV

Query:  IEEEDWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP
        I+EEDWRQ IIDYL+HGKLPTD RHR E+RRRAARFIYYK+TLYRRSYEGL LRCLGKEES KALEEAHSG+CGAHQSGP
Subjt:  IEEEDWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP

KAA0048376.1 uncharacterized protein E6C27_scaffold264G00950 [Cucumis melo var. makuwa]3.2e-17139.33Show/hide
Query:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT
        E S N    + E+LKE+FT  LTKI   E +K +   ++ +LP +R  + FDPKAYKL+ KAGYD TT TE KS++IFD++ ELS TQKKL K GY+IP 
Subjt:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT

Query:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRI--------EVPIVHQSSRSVFYRLKRVENQREPKSESLETSQLDGM
         +AGIGY+ SEPV I  KGK K      ++   + D+ +     S R+S F R+         +     + +S F RL  V   R  K  S+  S    +
Subjt:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRI--------EVPIVHQSSRSVFYRLKRVENQREPKSESLETSQLDGM

Query:  -KNNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDEMLDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL----
           +  + S+ PSRMKRK++V +NTEG L+V R  ++ T P + + E   + V CCH++ +E  + +I EED E AP SLEDG QST+DELKEVNL    
Subjt:  -KNNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDEMLDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------AGKPLVLYI
                                                                                                    GK L+LYI
Subjt:  -------------------------------------------------------------------------------------------AGKPLVLYI

Query:  TAQERSLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYV
         AQE SL ALLAQE +KGK CALYYLSRT  GAEL+YSPIEKMCL+LFFAIDK+RHYMQAFTIHLVAKADP+KY+LSRP +SGRLAKWAI+LQQYDIVY+
Subjt:  TAQERSLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYV

Query:  PQKAVKGQAVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL---------------------
        PQKAVKGQA+ADFLVDHPVP++WKL + LPDEE+ ++E  EP  M+F+GAARRSGAG  I+FISPEKHMLPYSFTFGEL                     
Subjt:  PQKAVKGQAVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL---------------------

Query:  -------------------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAI
                                             +L+  F+++ +EH+PR+ENKKADALANLATALT+ ED  +NI LCQ+WI+P  ES+ EE + I
Subjt:  -------------------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAI

Query:  SVYVIEEEDWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP
        SVY I+EEDWRQ IIDYL+HGKLPT+ RHR E+RRRAARFIYYK+TLYRRSYEGL LRCLGKEES KALEEAHSG+CGAHQSGP
Subjt:  SVYVIEEEDWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP

KAA0053731.1 uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa]2.4e-17438.01Show/hide
Query:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT
        E S N    + E+LKE+F  PLTKI   E +K E   ++ +LP +R  + F+PKAYKL+ KAGYDFTT TE KS++IFD++ ELS TQ KL K GY+IP 
Subjt:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT

Query:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRIEVPIVHQS----------------------SRSVFYRL----KRVE
         +AGIGY+ SEPV I  KGK KV N+ HITVEES DSKE K   SQR SVF+RI +  V  S                        S F RL    K+V+
Subjt:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRIEVPIVHQS----------------------SRSVFYRL----KRVE

Query:  N------QREPKSESLETSQLDGMK--------------NNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDEM
        +       R+   +SL  S   G K               +  + S+ PSRMKRK++V +NTEG L+VKR  ++ T P + + E   +   CCH++ +E 
Subjt:  N------QREPKSESLETSQLDGMK--------------NNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDEM

Query:  LDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL-------------------------------------------------------------------
         + +I EED E AP SLEDG QST+DELKEVNL                                                                   
Subjt:  LDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL-------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------------------AGKPLVLYITAQERSLG
                                                                                            GKPL+LYI AQE SLG
Subjt:  -----------------------------------------------------------------------------------AGKPLVLYITAQERSLG

Query:  ALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYVPQKAVKGQ
        ALLAQE +KGKECALYYLSRTL GAEL+YSPIEKMCL+LFFAIDK+RHYMQAFTIHLVAKADP+KY+LSRP +SGRLAKWAI+LQQYDIVY+PQKAVKGQ
Subjt:  ALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYVPQKAVKGQ

Query:  AVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL-----------------------------
        A+ADFL DH VP++WKL + LPDEE+ ++E  EPW M+F+GAARRSGAG GI+FISPEKHML YSFT GEL                             
Subjt:  AVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL-----------------------------

Query:  -----------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAISVYVIEEE
                                     +L+  F+++ +E++PR+ENKKADALANLATALT+ ED  +NI LCQ+WI+P  ES+ EE   ISVY I+EE
Subjt:  -----------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAISVYVIEEE

Query:  DWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP
        DWRQ IIDYL+HGKLPTD RHR E+RRRAARFIYYK+TLYRRSYEGL LRCLGKEES KALEEAHSG+CG HQSGP
Subjt:  DWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP

TYK02262.1 uncharacterized protein E5676_scaffold18G00630 [Cucumis melo var. makuwa]2.7e-17837.72Show/hide
Query:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT
        E S N    + E+LKE+FT PLTKI   E +K E   ++ +LP +R  + FDPKAYKL+ KAGYDFTT TE KS++IFD++ ELS TQKKL K GY+IP 
Subjt:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT

Query:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRIEVPIVHQS--------------------------------------
         +AGIGY+ SEP+ I  KGK KV N+ HITVEES DSKE K   SQR SVF+RI    +  S                                      
Subjt:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRIEVPIVHQS--------------------------------------

Query:  --------SRSVFYRLKRVENQREPKSESLETSQLDGMKNNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDEM
                 +S F RL  +  + + K+    +++   +  +  + S+ PSRMKRK++V +NTEG L+VKR  ++ T P + + E   +   CCH++ +E 
Subjt:  --------SRSVFYRLKRVENQREPKSESLETSQLDGMKNNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDEM

Query:  LDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL-------------------------------------------------------------------
         + +I EED E AP SLEDG QST+DELKEVNL                                                                   
Subjt:  LDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL-------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------------------AGKPLVLYITAQER
                                                                                               GKPL+LYI AQE 
Subjt:  --------------------------------------------------------------------------------------AGKPLVLYITAQER

Query:  SLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYVPQKAV
        SLGALLAQE +KGKECALYYLSRTL GAEL+YSPIEKMCL+LFFAIDK+RHYMQAFTIHLVAKADP+KY+LSRP +SGRLAKWAI+LQQYDIVY+PQKAV
Subjt:  SLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYVPQKAV

Query:  KGQAVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL--------------------------
        KGQA+ADFL DHPVP++WKL + LPDEE+ ++E  EPW M+F+GAARRSGAG GI+FISPEKHMLPYSFT GEL                          
Subjt:  KGQAVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL--------------------------

Query:  --------------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAISVYVI
                                        +L+  F+++ +EH+PR+ENKKADALANLATALT+ ED  +NI LCQ+WI+P  ES+ EE + ISVY I
Subjt:  --------------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAISVYVI

Query:  EEEDWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP
        +EEDWRQ IIDYL+HGKLPTD RHR E+RRRAARFIYYK+TLYRRSYEGL LRCLGKEES KALEEAHSG+CGAHQSGP
Subjt:  EEEDWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP

TYK18071.1 uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]1.3e-17738.06Show/hide
Query:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT
        E S N    + E+LKE+FT PLTKI   E +K E   ++ +LP +R  + FDPKAYKL+ KAGYDFTT TE KS++IFD++ ELS TQKKL K GY+IP 
Subjt:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT

Query:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRIEVPIVHQS--------------------------------------
         +AGIGY+ SEPV I  KGK KV N+ HITVEES DS+E K   SQR SVF+RI    +  S                                      
Subjt:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRIEVPIVHQS--------------------------------------

Query:  --------SRSVFYRLKRVENQREPKSESLETSQLDGM-KNNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDE
                 +S F RL  V   R+ K  S+  S    +   +  + S+ PSRMKRK++V +NTEG L+VKR  ++ T P + + E   +   C H++ +E
Subjt:  --------SRSVFYRLKRVENQREPKSESLETSQLDGM-KNNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDE

Query:  MLDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL------------------------------------------------------------------
          D +I EED E AP SLEDG QST+DELKEVNL                                                                  
Subjt:  MLDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------AGKPLVLYITAQE
                                                                                                GKPL+LYI AQE
Subjt:  ---------------------------------------------------------------------------------------AGKPLVLYITAQE

Query:  RSLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYVPQKA
         SLGALLAQE +KGKECALYYLSRTL GAEL+YSPIEKMCL+LFFAIDK+RHYMQAFTIHLVAKADP+KY+LSRP +SGRLAKWAI+LQQYDIVY+PQKA
Subjt:  RSLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYVPQKA

Query:  VKGQAVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL-------------------------
        VKGQA+ADFL DHPVP++WKL + LPDEE+ ++E  EPW M+F+GAARRSGAG GI+FISPEKHMLPYSFT GEL                         
Subjt:  VKGQAVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL-------------------------

Query:  ---------------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAISVYV
                                         +L+  F+++ +EH+PR+ENKKADALANLATALT+ ED  +NI LCQ+WI+P  ES+ EE + ISVY 
Subjt:  ---------------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAISVYV

Query:  IEEEDWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP
        I+EEDWRQ IIDYL+HGKLPTD RHR E+RRRAARFIYYK+TLYRRSYEGL LRCLGKEES KALEEAHSG+CGAHQSGP
Subjt:  IEEEDWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP

TrEMBL top hitse value%identityAlignment
A0A5A7TZU9 Ribonuclease H6.5e-17838.06Show/hide
Query:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT
        E S N    + E+LKE+FT PLTKI   E +K E   ++ +LP +R  + FDPKAYKL+ KAGYDFTT TE KS++IFD++ ELS TQKKL K GY+IP 
Subjt:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT

Query:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRIEVPIVHQS--------------------------------------
         +AGIGY+ SEPV I  KGK KV N+ HITVEES DS+E K   SQR SVF+RI    +  S                                      
Subjt:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRIEVPIVHQS--------------------------------------

Query:  --------SRSVFYRLKRVENQREPKSESLETSQLDGM-KNNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDE
                 +S F RL  V   R+ K  S+  S    +   +  + S+ PSRMKRK++V +NTEG L+VKR  ++ T P + + E   +   C H++ +E
Subjt:  --------SRSVFYRLKRVENQREPKSESLETSQLDGM-KNNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDE

Query:  MLDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL------------------------------------------------------------------
          D +I EED E AP SLEDG QST+DELKEVNL                                                                  
Subjt:  MLDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------AGKPLVLYITAQE
                                                                                                GKPL+LYI AQE
Subjt:  ---------------------------------------------------------------------------------------AGKPLVLYITAQE

Query:  RSLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYVPQKA
         SLGALLAQE +KGKECALYYLSRTL GAEL+YSPIEKMCL+LFFAIDK+RHYMQAFTIHLVAKADP+KY+LSRP +SGRLAKWAI+LQQYDIVY+PQKA
Subjt:  RSLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYVPQKA

Query:  VKGQAVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL-------------------------
        VKGQA+ADFL DHPVP++WKL + LPDEE+ ++E  EPW M+F+GAARRSGAG GI+FISPEKHMLPYSFT GEL                         
Subjt:  VKGQAVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL-------------------------

Query:  ---------------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAISVYV
                                         +L+  F+++ +EH+PR+ENKKADALANLATALT+ ED  +NI LCQ+WI+P  ES+ EE + ISVY 
Subjt:  ---------------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAISVYV

Query:  IEEEDWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP
        I+EEDWRQ IIDYL+HGKLPTD RHR E+RRRAARFIYYK+TLYRRSYEGL LRCLGKEES KALEEAHSG+CGAHQSGP
Subjt:  IEEEDWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP

A0A5A7U2B8 Reverse transcriptase1.5e-17139.33Show/hide
Query:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT
        E S N    + E+LKE+FT  LTKI   E +K +   ++ +LP +R  + FDPKAYKL+ KAGYD TT TE KS++IFD++ ELS TQKKL K GY+IP 
Subjt:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT

Query:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRI--------EVPIVHQSSRSVFYRLKRVENQREPKSESLETSQLDGM
         +AGIGY+ SEPV I  KGK K      ++   + D+ +     S R+S F R+         +     + +S F RL  V   R  K  S+  S    +
Subjt:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRI--------EVPIVHQSSRSVFYRLKRVENQREPKSESLETSQLDGM

Query:  -KNNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDEMLDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL----
           +  + S+ PSRMKRK++V +NTEG L+V R  ++ T P + + E   + V CCH++ +E  + +I EED E AP SLEDG QST+DELKEVNL    
Subjt:  -KNNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDEMLDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL----

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------AGKPLVLYI
                                                                                                    GK L+LYI
Subjt:  -------------------------------------------------------------------------------------------AGKPLVLYI

Query:  TAQERSLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYV
         AQE SL ALLAQE +KGK CALYYLSRT  GAEL+YSPIEKMCL+LFFAIDK+RHYMQAFTIHLVAKADP+KY+LSRP +SGRLAKWAI+LQQYDIVY+
Subjt:  TAQERSLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYV

Query:  PQKAVKGQAVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL---------------------
        PQKAVKGQA+ADFLVDHPVP++WKL + LPDEE+ ++E  EP  M+F+GAARRSGAG  I+FISPEKHMLPYSFTFGEL                     
Subjt:  PQKAVKGQAVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL---------------------

Query:  -------------------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAI
                                             +L+  F+++ +EH+PR+ENKKADALANLATALT+ ED  +NI LCQ+WI+P  ES+ EE + I
Subjt:  -------------------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAI

Query:  SVYVIEEEDWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP
        SVY I+EEDWRQ IIDYL+HGKLPT+ RHR E+RRRAARFIYYK+TLYRRSYEGL LRCLGKEES KALEEAHSG+CGAHQSGP
Subjt:  SVYVIEEEDWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP

A0A5A7UJR2 Reverse transcriptase1.1e-17438.01Show/hide
Query:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT
        E S N    + E+LKE+F  PLTKI   E +K E   ++ +LP +R  + F+PKAYKL+ KAGYDFTT TE KS++IFD++ ELS TQ KL K GY+IP 
Subjt:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT

Query:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRIEVPIVHQS----------------------SRSVFYRL----KRVE
         +AGIGY+ SEPV I  KGK KV N+ HITVEES DSKE K   SQR SVF+RI +  V  S                        S F RL    K+V+
Subjt:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRIEVPIVHQS----------------------SRSVFYRL----KRVE

Query:  N------QREPKSESLETSQLDGMK--------------NNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDEM
        +       R+   +SL  S   G K               +  + S+ PSRMKRK++V +NTEG L+VKR  ++ T P + + E   +   CCH++ +E 
Subjt:  N------QREPKSESLETSQLDGMK--------------NNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDEM

Query:  LDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL-------------------------------------------------------------------
         + +I EED E AP SLEDG QST+DELKEVNL                                                                   
Subjt:  LDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL-------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------------------AGKPLVLYITAQERSLG
                                                                                            GKPL+LYI AQE SLG
Subjt:  -----------------------------------------------------------------------------------AGKPLVLYITAQERSLG

Query:  ALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYVPQKAVKGQ
        ALLAQE +KGKECALYYLSRTL GAEL+YSPIEKMCL+LFFAIDK+RHYMQAFTIHLVAKADP+KY+LSRP +SGRLAKWAI+LQQYDIVY+PQKAVKGQ
Subjt:  ALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYVPQKAVKGQ

Query:  AVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL-----------------------------
        A+ADFL DH VP++WKL + LPDEE+ ++E  EPW M+F+GAARRSGAG GI+FISPEKHML YSFT GEL                             
Subjt:  AVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL-----------------------------

Query:  -----------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAISVYVIEEE
                                     +L+  F+++ +E++PR+ENKKADALANLATALT+ ED  +NI LCQ+WI+P  ES+ EE   ISVY I+EE
Subjt:  -----------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAISVYVIEEE

Query:  DWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP
        DWRQ IIDYL+HGKLPTD RHR E+RRRAARFIYYK+TLYRRSYEGL LRCLGKEES KALEEAHSG+CG HQSGP
Subjt:  DWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP

A0A5D3BTY1 Ribonuclease H1.3e-17837.72Show/hide
Query:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT
        E S N    + E+LKE+FT PLTKI   E +K E   ++ +LP +R  + FDPKAYKL+ KAGYDFTT TE KS++IFD++ ELS TQKKL K GY+IP 
Subjt:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT

Query:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRIEVPIVHQS--------------------------------------
         +AGIGY+ SEP+ I  KGK KV N+ HITVEES DSKE K   SQR SVF+RI    +  S                                      
Subjt:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRIEVPIVHQS--------------------------------------

Query:  --------SRSVFYRLKRVENQREPKSESLETSQLDGMKNNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDEM
                 +S F RL  +  + + K+    +++   +  +  + S+ PSRMKRK++V +NTEG L+VKR  ++ T P + + E   +   CCH++ +E 
Subjt:  --------SRSVFYRLKRVENQREPKSESLETSQLDGMKNNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDEM

Query:  LDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL-------------------------------------------------------------------
         + +I EED E AP SLEDG QST+DELKEVNL                                                                   
Subjt:  LDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL-------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------------------------------AGKPLVLYITAQER
                                                                                               GKPL+LYI AQE 
Subjt:  --------------------------------------------------------------------------------------AGKPLVLYITAQER

Query:  SLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYVPQKAV
        SLGALLAQE +KGKECALYYLSRTL GAEL+YSPIEKMCL+LFFAIDK+RHYMQAFTIHLVAKADP+KY+LSRP +SGRLAKWAI+LQQYDIVY+PQKAV
Subjt:  SLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYVPQKAV

Query:  KGQAVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL--------------------------
        KGQA+ADFL DHPVP++WKL + LPDEE+ ++E  EPW M+F+GAARRSGAG GI+FISPEKHMLPYSFT GEL                          
Subjt:  KGQAVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL--------------------------

Query:  --------------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAISVYVI
                                        +L+  F+++ +EH+PR+ENKKADALANLATALT+ ED  +NI LCQ+WI+P  ES+ EE + ISVY I
Subjt:  --------------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAISVYVI

Query:  EEEDWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP
        +EEDWRQ IIDYL+HGKLPTD RHR E+RRRAARFIYYK+TLYRRSYEGL LRCLGKEES KALEEAHSG+CGAHQSGP
Subjt:  EEEDWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP

A0A5D3D1E5 Ribonuclease H6.5e-17838.06Show/hide
Query:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT
        E S N    + E+LKE+FT PLTKI   E +K E   ++ +LP +R  + FDPKAYKL+ KAGYDFTT TE KS++IFD++ ELS TQKKL K GY+IP 
Subjt:  EYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPT

Query:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRIEVPIVHQS--------------------------------------
         +AGIGY+ SEPV I  KGK KV N+ HITVEES DS+E K   SQR SVF+RI    +  S                                      
Subjt:  LKAGIGYKPSEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRIEVPIVHQS--------------------------------------

Query:  --------SRSVFYRLKRVENQREPKSESLETSQLDGM-KNNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDE
                 +S F RL  V   R+ K  S+  S    +   +  + S+ PSRMKRK++V +NTEG L+VKR  ++ T P + + E   +   C H++ +E
Subjt:  --------SRSVFYRLKRVENQREPKSESLETSQLDGM-KNNNGLHSSVPSRMKRKLYVLINTEGPLRVKRQLIILTNPAEEDQEHGENDVSCCHISFDE

Query:  MLDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL------------------------------------------------------------------
          D +I EED E AP SLEDG QST+DELKEVNL                                                                  
Subjt:  MLDDEILEEDVEEAPSSLEDGSQSTVDELKEVNL------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------AGKPLVLYITAQE
                                                                                                GKPL+LYI AQE
Subjt:  ---------------------------------------------------------------------------------------AGKPLVLYITAQE

Query:  RSLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYVPQKA
         SLGALLAQE +KGKECALYYLSRTL GAEL+YSPIEKMCL+LFFAIDK+RHYMQAFTIHLVAKADP+KY+LSRP +SGRLAKWAI+LQQYDIVY+PQKA
Subjt:  RSLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYVPQKA

Query:  VKGQAVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL-------------------------
        VKGQA+ADFL DHPVP++WKL + LPDEE+ ++E  EPW M+F+GAARRSGAG GI+FISPEKHMLPYSFT GEL                         
Subjt:  VKGQAVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGEL-------------------------

Query:  ---------------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAISVYV
                                         +L+  F+++ +EH+PR+ENKKADALANLATALT+ ED  +NI LCQ+WI+P  ES+ EE + ISVY 
Subjt:  ---------------------------------QLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAISVYV

Query:  IEEEDWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP
        I+EEDWRQ IIDYL+HGKLPTD RHR E+RRRAARFIYYK+TLYRRSYEGL LRCLGKEES KALEEAHSG+CGAHQSGP
Subjt:  IEEEDWRQSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGP

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.63.0e-0730.89Show/hide
Query:  KPLVLYITAQERSLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQ
        K   L   A + +LGA+L+Q+        L Y+SRTLN  E++YS IEK  L++ +A    RHY+      + +   P+ ++      + +L +W + L 
Subjt:  KPLVLYITAQERSLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQ

Query:  QYDIVYVPQKAVKGQ--AVADFL
        ++D      K +KG+   VAD L
Subjt:  QYDIVYVPQKAVKGQ--AVADFL

P20825 Retrovirus-related Pol polyprotein from transposon 2972.5e-0926.6Show/hide
Query:  KPLVLYITAQERSLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQ
        K  VL   A   +LGA+L+Q         + ++SRTLN  EL+YS IEK  L++ +A    RHY+      + +   P++++ +      +L +W + L 
Subjt:  KPLVLYITAQERSLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQ

Query:  QYD--IVYVPQKAVKGQAVADFLVDHPVPTDW---KLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGELQLLGNFETV
        +Y   I Y+  K     +VAD L    +  +        S  ++    I +TE    YF            IIFI  +K+ + +S  FG       ++ +
Subjt:  QYD--IVYVPQKAVKGQAVADFLVDHPVPTDW---KLSESLPDEEIFYIEITEPWTMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGELQLLGNFETV

Query:  TME
        T+E
Subjt:  TME

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus3.3e-0926.75Show/hide
Query:  EAPSSLEDGSQSTVDELKEVNLAG---------KPLVLYITAQERSLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQ-
        + P +L++ +  + ++LK +  +          KP  L   A   ++GA+L+Q+ ++G++  + Y+SR+LN  E +Y+ IEK  L++ +++D +R Y+  
Subjt:  EAPSSLEDGSQSTVDELKEVNLAG---------KPLVLYITAQERSLGALLAQEREKGKECALYYLSRTLNGAELSYSPIEKMCLSLFFAIDKVRHYMQ-

Query:  AFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQY--DIVYVPQKAVKGQAVADFL
        A TI +     P+ + L     + +L +W   +++Y  +++Y P K+     VAD L
Subjt:  AFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQY--DIVYVPQKAVKGQAVADFL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATACTCAAATAATACGAAGTATGATGATGTAGAAATGTTGAAGGAGGATTTCACACTGCCTCTTACTAAGATATCAAGTCAAGAGATTAGGAAGTCCGAAGATCT
CAGTATGAAACAATTTCTTCCTGTGAAGCGAATGAAGGATCGCTTCGATCCCAAAGCATACAAACTTCTGGAAAAAGCAGGCTATGACTTCACAACTCACACTGAGTTCA
AAAGCTTGAGGATTTTCGATGACAAGCGGGAACTTTCTACAACACAGAAGAAGCTTTTGAAGTCAGGCTACAATATACCTACATTAAAGGCTGGAATTGGTTACAAACCG
TCAGAACCAGTGTATATAGTGAAAAAAGGAAAAGAAAAAGTGGAGAATAGCAATCACATCACGGTTGAAGAGAGCGATGACTCCAAGGAAAAGAAACATTCCATTAGTCA
AAGAATTTCAGTCTTCAATCGCATTGAGGTTCCAATTGTTCATCAATCGTCAAGATCCGTTTTCTACCGCCTCAAAAGAGTAGAAAATCAACGTGAGCCTAAGTCAGAGT
CCTTGGAAACAAGCCAACTCGATGGAATGAAGAATAATAACGGACTTCATAGTTCTGTCCCTTCACGAATGAAAAGAAAGCTTTATGTTCTTATAAACACAGAAGGTCCA
TTAAGAGTGAAGCGACAGTTAATCATTTTAACCAATCCAGCCGAGGAAGATCAAGAGCATGGAGAAAACGATGTTAGTTGTTGCCACATTTCCTTTGACGAAATGTTAGA
CGATGAAATATTAGAGGAGGACGTTGAAGAGGCGCCATCATCACTAGAGGATGGCAGTCAATCAACTGTTGATGAACTTAAAGAAGTGAACCTCGCTGGAAAACCTTTGG
TGTTGTATATTACTGCACAAGAAAGGTCACTCGGAGCATTACTCGCACAAGAAAGAGAGAAAGGTAAAGAATGTGCTCTCTACTACCTAAGTAGAACTTTGAATGGGGCA
GAACTAAGTTATTCACCCATCGAGAAGATGTGTCTGTCACTCTTCTTTGCCATCGATAAGGTGAGGCATTACATGCAAGCCTTCACAATACACTTGGTGGCAAAAGCGGA
CCCAATCAAATATGTTTTATCTAGGCCAACTGTCTCAGGACGACTGGCTAAATGGGCGATCTTACTCCAACAGTACGACATTGTCTATGTTCCGCAAAAGGCAGTAAAGG
GACAGGCCGTTGCAGATTTCTTAGTAGATCATCCAGTTCCAACAGATTGGAAATTATCTGAAAGCTTGCCTGACGAGGAGATCTTCTATATTGAAATTACTGAGCCTTGG
ACAATGTATTTCAATGGTGCAGCTCGAAGAAGCGGTGCGGGGGCAGGTATAATCTTCATCTCGCCAGAGAAGCACATGTTGCCATACAGTTTCACTTTTGGCGAGTTACA
GTTGTTGGGAAATTTTGAAACTGTGACCATGGAGCACGTCCCAAGAGCCGAAAACAAGAAGGCTGATGCTCTAGCAAATCTGGCTACAGCTTTAACAATTTTAGAGGATG
AAGTTGTAAATATCCCACTTTGCCAAAGATGGATCATACCACCAACTGAAAGTGAGAGTGAAGAAGTGAATGCAATATCCGTCTATGTGATTGAAGAAGAAGATTGGCGG
CAGTCAATTATAGACTATCTCCAACATGGAAAACTCCCTACAGATAACCGACATAGAACAGAAGTACGAAGGAGAGCAGCTCGTTTCATCTATTACAAAGAAACTCTCTA
TCGCCGTTCATATGAAGGTCTTTTCCTTCGATGCTTAGGAAAAGAAGAATCGATAAAAGCCTTAGAAGAAGCCCACTCGGGCGTATGCGGGGCTCACCAATCTGGGCCAA
GTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATACTCAAATAATACGAAGTATGATGATGTAGAAATGTTGAAGGAGGATTTCACACTGCCTCTTACTAAGATATCAAGTCAAGAGATTAGGAAGTCCGAAGATCT
CAGTATGAAACAATTTCTTCCTGTGAAGCGAATGAAGGATCGCTTCGATCCCAAAGCATACAAACTTCTGGAAAAAGCAGGCTATGACTTCACAACTCACACTGAGTTCA
AAAGCTTGAGGATTTTCGATGACAAGCGGGAACTTTCTACAACACAGAAGAAGCTTTTGAAGTCAGGCTACAATATACCTACATTAAAGGCTGGAATTGGTTACAAACCG
TCAGAACCAGTGTATATAGTGAAAAAAGGAAAAGAAAAAGTGGAGAATAGCAATCACATCACGGTTGAAGAGAGCGATGACTCCAAGGAAAAGAAACATTCCATTAGTCA
AAGAATTTCAGTCTTCAATCGCATTGAGGTTCCAATTGTTCATCAATCGTCAAGATCCGTTTTCTACCGCCTCAAAAGAGTAGAAAATCAACGTGAGCCTAAGTCAGAGT
CCTTGGAAACAAGCCAACTCGATGGAATGAAGAATAATAACGGACTTCATAGTTCTGTCCCTTCACGAATGAAAAGAAAGCTTTATGTTCTTATAAACACAGAAGGTCCA
TTAAGAGTGAAGCGACAGTTAATCATTTTAACCAATCCAGCCGAGGAAGATCAAGAGCATGGAGAAAACGATGTTAGTTGTTGCCACATTTCCTTTGACGAAATGTTAGA
CGATGAAATATTAGAGGAGGACGTTGAAGAGGCGCCATCATCACTAGAGGATGGCAGTCAATCAACTGTTGATGAACTTAAAGAAGTGAACCTCGCTGGAAAACCTTTGG
TGTTGTATATTACTGCACAAGAAAGGTCACTCGGAGCATTACTCGCACAAGAAAGAGAGAAAGGTAAAGAATGTGCTCTCTACTACCTAAGTAGAACTTTGAATGGGGCA
GAACTAAGTTATTCACCCATCGAGAAGATGTGTCTGTCACTCTTCTTTGCCATCGATAAGGTGAGGCATTACATGCAAGCCTTCACAATACACTTGGTGGCAAAAGCGGA
CCCAATCAAATATGTTTTATCTAGGCCAACTGTCTCAGGACGACTGGCTAAATGGGCGATCTTACTCCAACAGTACGACATTGTCTATGTTCCGCAAAAGGCAGTAAAGG
GACAGGCCGTTGCAGATTTCTTAGTAGATCATCCAGTTCCAACAGATTGGAAATTATCTGAAAGCTTGCCTGACGAGGAGATCTTCTATATTGAAATTACTGAGCCTTGG
ACAATGTATTTCAATGGTGCAGCTCGAAGAAGCGGTGCGGGGGCAGGTATAATCTTCATCTCGCCAGAGAAGCACATGTTGCCATACAGTTTCACTTTTGGCGAGTTACA
GTTGTTGGGAAATTTTGAAACTGTGACCATGGAGCACGTCCCAAGAGCCGAAAACAAGAAGGCTGATGCTCTAGCAAATCTGGCTACAGCTTTAACAATTTTAGAGGATG
AAGTTGTAAATATCCCACTTTGCCAAAGATGGATCATACCACCAACTGAAAGTGAGAGTGAAGAAGTGAATGCAATATCCGTCTATGTGATTGAAGAAGAAGATTGGCGG
CAGTCAATTATAGACTATCTCCAACATGGAAAACTCCCTACAGATAACCGACATAGAACAGAAGTACGAAGGAGAGCAGCTCGTTTCATCTATTACAAAGAAACTCTCTA
TCGCCGTTCATATGAAGGTCTTTTCCTTCGATGCTTAGGAAAAGAAGAATCGATAAAAGCCTTAGAAGAAGCCCACTCGGGCGTATGCGGGGCTCACCAATCTGGGCCAA
GTTGGTGA
Protein sequenceShow/hide protein sequence
MEYSNNTKYDDVEMLKEDFTLPLTKISSQEIRKSEDLSMKQFLPVKRMKDRFDPKAYKLLEKAGYDFTTHTEFKSLRIFDDKRELSTTQKKLLKSGYNIPTLKAGIGYKP
SEPVYIVKKGKEKVENSNHITVEESDDSKEKKHSISQRISVFNRIEVPIVHQSSRSVFYRLKRVENQREPKSESLETSQLDGMKNNNGLHSSVPSRMKRKLYVLINTEGP
LRVKRQLIILTNPAEEDQEHGENDVSCCHISFDEMLDDEILEEDVEEAPSSLEDGSQSTVDELKEVNLAGKPLVLYITAQERSLGALLAQEREKGKECALYYLSRTLNGA
ELSYSPIEKMCLSLFFAIDKVRHYMQAFTIHLVAKADPIKYVLSRPTVSGRLAKWAILLQQYDIVYVPQKAVKGQAVADFLVDHPVPTDWKLSESLPDEEIFYIEITEPW
TMYFNGAARRSGAGAGIIFISPEKHMLPYSFTFGELQLLGNFETVTMEHVPRAENKKADALANLATALTILEDEVVNIPLCQRWIIPPTESESEEVNAISVYVIEEEDWR
QSIIDYLQHGKLPTDNRHRTEVRRRAARFIYYKETLYRRSYEGLFLRCLGKEESIKALEEAHSGVCGAHQSGPSW