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Moc04g20430 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g20430
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111024115
Genome locationchr4:14819830..14829127
RNA-Seq ExpressionMoc04g20430
SyntenyMoc04g20430
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043652.1 uncharacterized protein E6C27_scaffold320G001000 [Cucumis melo var. makuwa]1.7e-1345.61Show/hide
Query:  EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGRGRG
        E    + + REA +G + RMI +MEALT+R+ R E +N+A+ER+PPP  P ++   ++++ EGDGSD  +DDQ T+L  P    R VG G+ R RGRGR 
Subjt:  EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGRGRG

Query:  YHNFQRAPRANAQQ
        Y N QR  +  A Q
Subjt:  YHNFQRAPRANAQQ

XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]1.7e-5093.1Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGR
        MANLG EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQA+ RVPPPP  RVMDEDEYEGDGSDHWEDDQATVLA PRGGD HVG GLDRGRGR
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGR

Query:  GRGYHNFQRAPRANAQ
        GRGYHNFQRAPRANAQ
Subjt:  GRGYHNFQRAPRANAQ

XP_023520282.1 uncharacterized protein LOC111783592 [Cucurbita pepo subsp. pepo]5.7e-1451.38Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGR
        M N  D  NI+DAR REA + T+ER+IR +E LT+RIGRLE QNQA++R+P P P      D YEGD SDH ED+              VG GL RGR  
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGR

Query:  GRGYHNFQR
        GR YHN Q+
Subjt:  GRGYHNFQR

XP_023520835.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo]5.7e-1451.38Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGR
        M N  D  NI+DAR REA + T+ER+IR +E LT+RIGRLE QNQA++R+P P P      D YEGD SDH ED+              VG GL RGR  
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGR

Query:  GRGYHNFQR
        GR YHN Q+
Subjt:  GRGYHNFQR

XP_023553652.1 uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo]1.1e-1249.54Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGR
        M N  D  +I+DAR REA + T++R+IR +E LT+RIGRLE QNQA++R+P P P      D YEGD SDH ED+              VG GL RGR  
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGR

Query:  GRGYHNFQR
        GR YHN Q+
Subjt:  GRGYHNFQR

TrEMBL top hitse value%identityAlignment
A0A5A7TK52 Retrotrans_gag domain-containing protein8.1e-1445.61Show/hide
Query:  EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGRGRG
        E    + + REA +G + RMI +MEALT+R+ R E +N+A+ER+PPP  P ++   ++++ EGDGSD  +DDQ T+L  P    R VG G+ R RGRGR 
Subjt:  EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGRGRG

Query:  YHNFQRAPRANAQQ
        Y N QR  +  A Q
Subjt:  YHNFQRAPRANAQQ

A0A5A7TYI0 Uncharacterized protein7.8e-0943.56Show/hide
Query:  MEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGRGRGYHNFQR-----APRANAQQSLLK
        MEALT+R+ RLE +N+A+ER+PPP  P +    + ++YEGDG D  +DDQ T+L  P    R VG G+ R RG G+ Y N QR      P+     + +K
Subjt:  MEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGRGRGYHNFQR-----APRANAQQSLLK

Query:  F
        F
Subjt:  F

A0A5D3CHG3 Retrotrans_gag domain-containing protein8.4e-1148.42Show/hide
Query:  MIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGRGRGYHNFQRAPRANAQQ
        MI +MEALT+R+ R E +N+A+ER+PPP  P ++   ++++ EGDGSD  +DDQ T+L  P    R VG G+ R RGRGR Y N QR  +  A Q
Subjt:  MIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGRGRGYHNFQRAPRANAQQ

A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241158.3e-5193.1Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGR
        MANLG EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQA+ RVPPPP  RVMDEDEYEGDGSDHWEDDQATVLA PRGGD HVG GLDRGRGR
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGR

Query:  GRGYHNFQRAPRANAQ
        GRGYHNFQRAPRANAQ
Subjt:  GRGYHNFQRAPRANAQ

A0A6J1I7T3 LOW QUALITY PROTEIN: uncharacterized protein LOC1114699483.5e-0954.67Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDD
        M N  +  +I+DAR REA + T+ER+IR +E LT+RIGRLE QNQA++R+P P P      D YEGD SDH ED+
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCACTGCGGGGTTGCCAAAAGGTGATCGTTGCTGACCTAGGAACACTTCAACCAGCGGATGAGGTGATTACGCTTGTTTACATGCGTAAAAAGAAGGACCATTT
GGGAGTGCAAATTAATCAAAAGGAGCAAAAAGTCGGAAATACCTACATGGGAGGCGCTAGGCGCTTGGGAAGGCTGCAGAAGACAGTTTTTCTTCCAACTTTGCCCTTAT
TGAAACGTGTCTTCCCATGTGTTTTGGTGGTTCCAACCGATGCATACCATAACCACCAGTCAAGAGGCGTTAACCTACTCAACAATGAAATCACTGGGGGTTGCCAAAAG
GTGACCGTTGCTGACCTAGGAACACCCCAACCAGCGGAAGAGGCATTAACCTACTCAGCAATGAAATCACTGCAGGGTTGTCAAAGACAGGAGGTGACCACCGCTGACCT
AGGAACACCTCAACCAGCGGAAGAGGCGTTAACCTACTCAGCAATGAAGTCACTGCAAAGGCAAACCGAAGTCTTTTCATTTCTTGTAATCCGTTCTAAAACTTTTCCTT
GGGTTGATTCCATACTTGTTTTCGGGGTTTTTGGGATTGAGTTCTATGGGTCTTGTTCGTTAGCAAGCATGGCTAATCTTGGAGATGAAGGCAATATTTCTGATGCCCGG
AGGAGAGAGGCGCTAGAAGGAACTGTTGAACGAATGATTCGTAGCATGGAGGCATTGACAGAACGGATAGGAAGGTTGGAGACTCAAAACCAAGCTCAGGAGAGAGTTCC
ACCACCTCCACCACCACGTGTTATGGATGAGGATGAGTATGAAGGTGATGGATCCGATCATTGGGAGGACGATCAGGCTACAGTTTTAGCGGGTCCAAGAGGGGGTGATA
GACACGTTGGTCGTGGCTTAGATCGAGGGAGAGGCCGGGGAAGAGGCTATCATAATTTCCAAAGAGCCCCACGAGCGAATGCTCAACAAAGCTTGTTGAAGTTTCCTAGC
TCTCGATCTTGTAATCGGTCCATGAGGCATAACAACGGTAGCTCCTTGGTTCATATCACCACCGCTGACCTAGGAACATCTCAACCAGCGGAAGAGGCGTTTAACCTACT
CAGCAATGAAGTCACTGCAAGGCAGACCGAAGGTGACCACCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCACTGCGGGGTTGCCAAAAGGTGATCGTTGCTGACCTAGGAACACTTCAACCAGCGGATGAGGTGATTACGCTTGTTTACATGCGTAAAAAGAAGGACCATTT
GGGAGTGCAAATTAATCAAAAGGAGCAAAAAGTCGGAAATACCTACATGGGAGGCGCTAGGCGCTTGGGAAGGCTGCAGAAGACAGTTTTTCTTCCAACTTTGCCCTTAT
TGAAACGTGTCTTCCCATGTGTTTTGGTGGTTCCAACCGATGCATACCATAACCACCAGTCAAGAGGCGTTAACCTACTCAACAATGAAATCACTGGGGGTTGCCAAAAG
GTGACCGTTGCTGACCTAGGAACACCCCAACCAGCGGAAGAGGCATTAACCTACTCAGCAATGAAATCACTGCAGGGTTGTCAAAGACAGGAGGTGACCACCGCTGACCT
AGGAACACCTCAACCAGCGGAAGAGGCGTTAACCTACTCAGCAATGAAGTCACTGCAAAGGCAAACCGAAGTCTTTTCATTTCTTGTAATCCGTTCTAAAACTTTTCCTT
GGGTTGATTCCATACTTGTTTTCGGGGTTTTTGGGATTGAGTTCTATGGGTCTTGTTCGTTAGCAAGCATGGCTAATCTTGGAGATGAAGGCAATATTTCTGATGCCCGG
AGGAGAGAGGCGCTAGAAGGAACTGTTGAACGAATGATTCGTAGCATGGAGGCATTGACAGAACGGATAGGAAGGTTGGAGACTCAAAACCAAGCTCAGGAGAGAGTTCC
ACCACCTCCACCACCACGTGTTATGGATGAGGATGAGTATGAAGGTGATGGATCCGATCATTGGGAGGACGATCAGGCTACAGTTTTAGCGGGTCCAAGAGGGGGTGATA
GACACGTTGGTCGTGGCTTAGATCGAGGGAGAGGCCGGGGAAGAGGCTATCATAATTTCCAAAGAGCCCCACGAGCGAATGCTCAACAAAGCTTGTTGAAGTTTCCTAGC
TCTCGATCTTGTAATCGGTCCATGAGGCATAACAACGGTAGCTCCTTGGTTCATATCACCACCGCTGACCTAGGAACATCTCAACCAGCGGAAGAGGCGTTTAACCTACT
CAGCAATGAAGTCACTGCAAGGCAGACCGAAGGTGACCACCGCTGA
Protein sequenceShow/hide protein sequence
MKSLRGCQKVIVADLGTLQPADEVITLVYMRKKKDHLGVQINQKEQKVGNTYMGGARRLGRLQKTVFLPTLPLLKRVFPCVLVVPTDAYHNHQSRGVNLLNNEITGGCQK
VTVADLGTPQPAEEALTYSAMKSLQGCQRQEVTTADLGTPQPAEEALTYSAMKSLQRQTEVFSFLVIRSKTFPWVDSILVFGVFGIEFYGSCSLASMANLGDEGNISDAR
RREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGRGRGYHNFQRAPRANAQQSLLKFPS
SRSCNRSMRHNNGSSLVHITTADLGTSQPAEEAFNLLSNEVTARQTEGDHR