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Moc04g20510 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g20510
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA-directed DNA polymerase
Genome locationchr4:14887806..14892579
RNA-Seq ExpressionMoc04g20510
SyntenyMoc04g20510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157917.1 uncharacterized protein LOC111024527 [Momordica charantia]2.0e-2847.19Show/hide
Query:  HHPGCEPPKKQNAGAAGTSYTPTYQHKVQYPPGFSGQNLQAAPKHYEA--MKLEDMFKAYMVKNEAYMVKNDTNVQSVAASLGNMEVQI-----------
        +HP      KQ     GTS  P +Q KV Y PGF+ Q  + A K  E     LE + K        YM  ND  VQS AASL N+E+Q+           
Subjt:  HHPGCEPPKKQNAGAAGTSYTPTYQHKVQYPPGFSGQNLQAAPKHYEA--MKLEDMFKAYMVKNEAYMVKNDTNVQSVAASLGNMEVQI-----------

Query:  -------VEALEQMPTYVKFSKDVLTKKRILGEFETVCLTKECSTILTSKIPVKMKDPGSFTIPVAIRDQKIKFSAYD
               VE LEQMP Y++F K++LTKKR LGE+ETV +TK CSTIL SKIP KMKDPGSFTIPV+I  Q+I  +  D
Subjt:  -------VEALEQMPTYVKFSKDVLTKKRILGEFETVCLTKECSTILTSKIPVKMKDPGSFTIPVAIRDQKIKFSAYD

XP_022158768.1 uncharacterized protein LOC111025234 [Momordica charantia]1.0e-2437.55Show/hide
Query:  GQNLQAAPKHYEAMKLEDMFKAYMVKNEAYMVKNDTNVQSVAASLGNME---------------------------------------------------
        G N QAAPKH E M LEDMFKAYM KNE YM+KNDT +QS+AASLGN++                                                   
Subjt:  GQNLQAAPKHYEAMKLEDMFKAYMVKNEAYMVKNDTNVQSVAASLGNME---------------------------------------------------

Query:  -------------------------------------------------------------VQIVEALEQMPTYVKFSKDVLTKKRILGEFETVCLTKEC
                                                                     + +VEAL+QMPTYV+F KD+LTKK  L EF+ VCLTKEC
Subjt:  -------------------------------------------------------------VQIVEALEQMPTYVKFSKDVLTKKRILGEFETVCLTKEC

Query:  STILTSKIPVKMKDPGSFTIPVAIRDQKI
        STIL+SKI  KMK PGSFTIP+AI DQKI
Subjt:  STILTSKIPVKMKDPGSFTIPVAIRDQKI

XP_022158993.1 uncharacterized protein LOC111025437 [Momordica charantia]5.9e-2041.4Show/hide
Query:  MPTYVKFSKDVLTKKRILGEFETVCLTKECSTILTSKIPVKMKDPGSFTIPVAI----------------------------------------------
        M  YV+F K++LTKKR LGE+ETV + K CS ILTSKIP KMKDP SFTIPV+I                                              
Subjt:  MPTYVKFSKDVLTKKRILGEFETVCLTKECSTILTSKIPVKMKDPGSFTIPVAI----------------------------------------------

Query:  ------------RDQKIKFSAYDSMKYPIEAEECSLLKILHETLIETLSLEAMLEYM
                    +DQ++KFS YDSMK+P E++ECS+LKIL E L+E L +EAML+++
Subjt:  ------------RDQKIKFSAYDSMKYPIEAEECSLLKILHETLIETLSLEAMLEYM

XP_022159043.1 uncharacterized protein LOC111025484 [Momordica charantia]3.1e-2145.06Show/hide
Query:  MPTYVKFSKDVLTKKRILGEFETVCLTKECSTILTSKIPVKMKDPGSFTIPVAI---------------------------------------------R
        MP YVKF +++LTKKR LGE+ETV +TK CSTILTSKI  K+KDP SFTI V+I                                             +
Subjt:  MPTYVKFSKDVLTKKRILGEFETVCLTKECSTILTSKIPVKMKDPGSFTIPVAI---------------------------------------------R

Query:  DQKIKFSAYDSMKYPIEAEECSLLKILHETLIETLSLEAMLEYMGGSGRAMLEHTVSRDAGA
        DQ++KFS YDSMK+P E+EE  +LKIL E L+E LS E           AMLEH+VS DAGA
Subjt:  DQKIKFSAYDSMKYPIEAEECSLLKILHETLIETLSLEAMLEYMGGSGRAMLEHTVSRDAGA

XP_023521781.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785639, partial [Cucurbita pepo subsp. pepo]6.5e-1942.41Show/hide
Query:  SYTPTYQHKVQYPPGFSGQNL--------------QAAPKHYEAMKLEDMFKAYMVKNEAYMVKNDTNVQSVAASLGNMEVQIVE----------ALEQM
        SY      K  YPPGF  QN                +  +H     LE + K YM KN+A        +QS  ASL N+EVQ+ +          AL+QM
Subjt:  SYTPTYQHKVQYPPGFSGQNL--------------QAAPKHYEAMKLEDMFKAYMVKNEAYMVKNDTNVQSVAASLGNMEVQIVE----------ALEQM

Query:  PTYVKFSKDVLTKKRILGEFETVCLTKECSTILTSKIPVKMKDPGSFTIPVAIRDQKI
        P YVKF KDVLT +R   EF+ V L +ECS IL +KIP+K KDPGSFTIP++I  +K+
Subjt:  PTYVKFSKDVLTKKRILGEFETVCLTKECSTILTSKIPVKMKDPGSFTIPVAIRDQKI

TrEMBL top hitse value%identityAlignment
A0A6J1CS22 uncharacterized protein LOC1110138054.1e-1933.33Show/hide
Query:  NMEVQIVEALEQMPTYVKFSKDVLTKKRILGEFETVCLTKECSTILTSKIPVKMKDPGSFTIPVAI----------------------------------
        ++ V +VEALEQMP YV+F K++LTKKR+LGE+E V +TK CSTILTSKIP KMKDPGSFTIPV+I                                  
Subjt:  NMEVQIVEALEQMPTYVKFSKDVLTKKRILGEFETVCLTKECSTILTSKIPVKMKDPGSFTIPVAI----------------------------------

Query:  -------------------------------------------------------------------------RDQKIKFSAYDSMKYPIEAEECSLLKI
                                                                                 +DQ++KFS ++SMK+  E+EECS+LKI
Subjt:  -------------------------------------------------------------------------RDQKIKFSAYDSMKYPIEAEECSLLKI

Query:  LHETLIETLSLEAMLEYMGGSG
        L E L+E L  E MLE +   G
Subjt:  LHETLIETLSLEAMLEYMGGSG

A0A6J1DVS9 uncharacterized protein LOC1110245279.8e-2947.19Show/hide
Query:  HHPGCEPPKKQNAGAAGTSYTPTYQHKVQYPPGFSGQNLQAAPKHYEA--MKLEDMFKAYMVKNEAYMVKNDTNVQSVAASLGNMEVQI-----------
        +HP      KQ     GTS  P +Q KV Y PGF+ Q  + A K  E     LE + K        YM  ND  VQS AASL N+E+Q+           
Subjt:  HHPGCEPPKKQNAGAAGTSYTPTYQHKVQYPPGFSGQNLQAAPKHYEA--MKLEDMFKAYMVKNEAYMVKNDTNVQSVAASLGNMEVQI-----------

Query:  -------VEALEQMPTYVKFSKDVLTKKRILGEFETVCLTKECSTILTSKIPVKMKDPGSFTIPVAIRDQKIKFSAYD
               VE LEQMP Y++F K++LTKKR LGE+ETV +TK CSTIL SKIP KMKDPGSFTIPV+I  Q+I  +  D
Subjt:  -------VEALEQMPTYVKFSKDVLTKKRILGEFETVCLTKECSTILTSKIPVKMKDPGSFTIPVAIRDQKIKFSAYD

A0A6J1DX14 uncharacterized protein LOC1110252345.0e-2537.55Show/hide
Query:  GQNLQAAPKHYEAMKLEDMFKAYMVKNEAYMVKNDTNVQSVAASLGNME---------------------------------------------------
        G N QAAPKH E M LEDMFKAYM KNE YM+KNDT +QS+AASLGN++                                                   
Subjt:  GQNLQAAPKHYEAMKLEDMFKAYMVKNEAYMVKNDTNVQSVAASLGNME---------------------------------------------------

Query:  -------------------------------------------------------------VQIVEALEQMPTYVKFSKDVLTKKRILGEFETVCLTKEC
                                                                     + +VEAL+QMPTYV+F KD+LTKK  L EF+ VCLTKEC
Subjt:  -------------------------------------------------------------VQIVEALEQMPTYVKFSKDVLTKKRILGEFETVCLTKEC

Query:  STILTSKIPVKMKDPGSFTIPVAIRDQKI
        STIL+SKI  KMK PGSFTIP+AI DQKI
Subjt:  STILTSKIPVKMKDPGSFTIPVAIRDQKI

A0A6J1DXL0 uncharacterized protein LOC1110254372.9e-2041.4Show/hide
Query:  MPTYVKFSKDVLTKKRILGEFETVCLTKECSTILTSKIPVKMKDPGSFTIPVAI----------------------------------------------
        M  YV+F K++LTKKR LGE+ETV + K CS ILTSKIP KMKDP SFTIPV+I                                              
Subjt:  MPTYVKFSKDVLTKKRILGEFETVCLTKECSTILTSKIPVKMKDPGSFTIPVAI----------------------------------------------

Query:  ------------RDQKIKFSAYDSMKYPIEAEECSLLKILHETLIETLSLEAMLEYM
                    +DQ++KFS YDSMK+P E++ECS+LKIL E L+E L +EAML+++
Subjt:  ------------RDQKIKFSAYDSMKYPIEAEECSLLKILHETLIETLSLEAMLEYM

A0A6J1DXQ8 uncharacterized protein LOC1110254841.5e-2145.06Show/hide
Query:  MPTYVKFSKDVLTKKRILGEFETVCLTKECSTILTSKIPVKMKDPGSFTIPVAI---------------------------------------------R
        MP YVKF +++LTKKR LGE+ETV +TK CSTILTSKI  K+KDP SFTI V+I                                             +
Subjt:  MPTYVKFSKDVLTKKRILGEFETVCLTKECSTILTSKIPVKMKDPGSFTIPVAI---------------------------------------------R

Query:  DQKIKFSAYDSMKYPIEAEECSLLKILHETLIETLSLEAMLEYMGGSGRAMLEHTVSRDAGA
        DQ++KFS YDSMK+P E+EE  +LKIL E L+E LS E           AMLEH+VS DAGA
Subjt:  DQKIKFSAYDSMKYPIEAEECSLLKILHETLIETLSLEAMLEYMGGSGRAMLEHTVSRDAGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCCCGAGGCCGACTACTGAGCCCACTCTGGCTCAGTTGCACCACCCAGGGTGCGAGCCACCCAAGAAGCAAAATGCTGGAGCAGCTGGAACAAGCTATACTCCAAC
ATACCAACATAAGGTGCAGTACCCACCTGGTTTTTCTGGACAGAATCTACAGGCCGCTCCAAAGCATTATGAGGCTATGAAACTAGAGGATATGTTTAAGGCGTATATGG
TAAAGAACGAAGCTTATATGGTGAAGAATGATACTAATGTTCAAAGTGTAGCTGCATCCTTGGGGAATATGGAGGTGCAAATAGTGGAAGCCTTGGAGCAGATGCCTACA
TATGTGAAGTTTTCGAAGGATGTGCTCACTAAGAAGCGTATACTGGGAGAGTTTGAAACAGTCTGCTTAACCAAGGAGTGTAGTACAATTTTGACCAGTAAAATACCGGT
GAAAATGAAAGATCCTGGAAGTTTCACAATTCCAGTAGCTATCAGAGACCAGAAGATCAAATTCTCAGCGTATGACTCCATGAAGTACCCAATAGAAGCTGAAGAGTGCT
CTTTGCTGAAAATTCTACATGAAACATTAATAGAGACGCTAAGCTTAGAAGCCATGTTGGAGTATATGGGTGGTAGTGGAAGAGCTATGCTGGAGCATACTGTAAGCAGG
GATGCTGGAGCTCAAGAAGGTTTTACTTGTAGAGTGAAAGTGCAGATCATTGTAGAGGAAAAGCCACCAAGCTTACTTGTAGAAGAGCCACCCGACATCGAGCCTACTCT
AAAAGAGCATCCGCTTGCGGGTAGTGACTGTTTTTGTTCCTACTCTAGCTTAGGTTCCAGTACAAAGGCCCTAGCAGCATCCAGAATTGGAGAATTTGTTAAGGGCAAGC
CAAATGCTTTCAAGGCTATGAAAGTGTTGCCAAAGCATGGAAGGAAGATGCATTTATGTTGGAGTTGGAAGCCGCTCAGGATGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCCCGAGGCCGACTACTGAGCCCACTCTGGCTCAGTTGCACCACCCAGGGTGCGAGCCACCCAAGAAGCAAAATGCTGGAGCAGCTGGAACAAGCTATACTCCAAC
ATACCAACATAAGGTGCAGTACCCACCTGGTTTTTCTGGACAGAATCTACAGGCCGCTCCAAAGCATTATGAGGCTATGAAACTAGAGGATATGTTTAAGGCGTATATGG
TAAAGAACGAAGCTTATATGGTGAAGAATGATACTAATGTTCAAAGTGTAGCTGCATCCTTGGGGAATATGGAGGTGCAAATAGTGGAAGCCTTGGAGCAGATGCCTACA
TATGTGAAGTTTTCGAAGGATGTGCTCACTAAGAAGCGTATACTGGGAGAGTTTGAAACAGTCTGCTTAACCAAGGAGTGTAGTACAATTTTGACCAGTAAAATACCGGT
GAAAATGAAAGATCCTGGAAGTTTCACAATTCCAGTAGCTATCAGAGACCAGAAGATCAAATTCTCAGCGTATGACTCCATGAAGTACCCAATAGAAGCTGAAGAGTGCT
CTTTGCTGAAAATTCTACATGAAACATTAATAGAGACGCTAAGCTTAGAAGCCATGTTGGAGTATATGGGTGGTAGTGGAAGAGCTATGCTGGAGCATACTGTAAGCAGG
GATGCTGGAGCTCAAGAAGGTTTTACTTGTAGAGTGAAAGTGCAGATCATTGTAGAGGAAAAGCCACCAAGCTTACTTGTAGAAGAGCCACCCGACATCGAGCCTACTCT
AAAAGAGCATCCGCTTGCGGGTAGTGACTGTTTTTGTTCCTACTCTAGCTTAGGTTCCAGTACAAAGGCCCTAGCAGCATCCAGAATTGGAGAATTTGTTAAGGGCAAGC
CAAATGCTTTCAAGGCTATGAAAGTGTTGCCAAAGCATGGAAGGAAGATGCATTTATGTTGGAGTTGGAAGCCGCTCAGGATGCTTTAG
Protein sequenceShow/hide protein sequence
MRPRPTTEPTLAQLHHPGCEPPKKQNAGAAGTSYTPTYQHKVQYPPGFSGQNLQAAPKHYEAMKLEDMFKAYMVKNEAYMVKNDTNVQSVAASLGNMEVQIVEALEQMPT
YVKFSKDVLTKKRILGEFETVCLTKECSTILTSKIPVKMKDPGSFTIPVAIRDQKIKFSAYDSMKYPIEAEECSLLKILHETLIETLSLEAMLEYMGGSGRAMLEHTVSR
DAGAQEGFTCRVKVQIIVEEKPPSLLVEEPPDIEPTLKEHPLAGSDCFCSYSSLGSSTKALAASRIGEFVKGKPNAFKAMKVLPKHGRKMHLCWSWKPLRML