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Moc04g20590 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g20590
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr4:14957080..14957436
RNA-Seq ExpressionMoc04g20590
SyntenyMoc04g20590
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040448.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-3165.81Show/hide
Query:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW
        +MNK+ Y LT L N+L+ +E LMK KG KGE N  TS + FHRG T GTKS PSSSG+K +KKKKGGQGNK  PAA +  KKAK AAKG CFH   + HW
Subjt:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW

Query:  KRNCPKYLAEKKKSKEG
        KRNCPKYLAEKKK+K+G
Subjt:  KRNCPKYLAEKKKSKEG
KAA0046415.1 gag/pol protein [Cucumis melo var. makuwa]6.1e-3165.81Show/hide
Query:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW
        +MNK+ Y LT + N+L+T+E LMK KG KGE N  TS + FHRGLT GTKS PSSSG+K +KKKKGGQGNK   AA +  KKAK AAKG CFH   + HW
Subjt:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW

Query:  KRNCPKYLAEKKKSKEG
        KRNCPKYLAEKKK+K+G
Subjt:  KRNCPKYLAEKKKSKEG
KAA0046844.1 gag/pol protein [Cucumis melo var. makuwa]7.9e-3165.25Show/hide
Query:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW
        +MNK+ Y LT L N+L+T+E LMK KG KGE N  TS + FHRG T GTK  PSSSG+K +KKKKGGQGNK   AAT+  KKAK  AKG CFH   + HW
Subjt:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW

Query:  KRNCPKYLAEKKKSKEGN
        KRNCPKYLAEKKK+K+GN
Subjt:  KRNCPKYLAEKKKSKEGN
KAA0050670.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-3166.67Show/hide
Query:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW
        +MNK+ Y LT L N+L+T+E LMK KG KGE N  TS + FHRGLTFGTKS PSSSG+K +KKKKGGQGNK    A +  KKAK AAKG CFH   + HW
Subjt:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW

Query:  KRNCPKYLAEKKKSKEG
        KRNCPKYLAEKKK+K+G
Subjt:  KRNCPKYLAEKKKSKEG
TYK28896.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-3165.81Show/hide
Query:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW
        +MNK+ Y LT L N+L+ +E LMK KG KGE N  TS + FHRG T GTKS PSSSG+K +KKKKGGQGNK  PAA +  KKAK AAKG CFH   + HW
Subjt:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW

Query:  KRNCPKYLAEKKKSKEG
        KRNCPKYLAEKKK+K+G
Subjt:  KRNCPKYLAEKKKSKEG
TrEMBL top hitse value%identityAlignment
A0A5A7TC08 Gag/pol protein1.3e-3165.81Show/hide
Query:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW
        +MNK+ Y LT L N+L+ +E LMK KG KGE N  TS + FHRG T GTKS PSSSG+K +KKKKGGQGNK  PAA +  KKAK AAKG CFH   + HW
Subjt:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW

Query:  KRNCPKYLAEKKKSKEG
        KRNCPKYLAEKKK+K+G
Subjt:  KRNCPKYLAEKKKSKEG
A0A5A7TYF5 Gag/pol protein2.9e-3165.81Show/hide
Query:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW
        +MNK+ Y LT + N+L+T+E LMK KG KGE N  TS + FHRGLT GTKS PSSSG+K +KKKKGGQGNK   AA +  KKAK AAKG CFH   + HW
Subjt:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW

Query:  KRNCPKYLAEKKKSKEG
        KRNCPKYLAEKKK+K+G
Subjt:  KRNCPKYLAEKKKSKEG
A0A5A7U676 Gag/pol protein5.9e-3266.67Show/hide
Query:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW
        +MNK+ Y LT L N+L+T+E LMK KG KGE N  TS + FHRGLTFGTKS PSSSG+K +KKKKGGQGNK    A +  KKAK AAKG CFH   + HW
Subjt:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW

Query:  KRNCPKYLAEKKKSKEG
        KRNCPKYLAEKKK+K+G
Subjt:  KRNCPKYLAEKKKSKEG
A0A5D3C269 Gag/pol protein3.8e-3165.25Show/hide
Query:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW
        +MNK+ Y LT L N+L+T+E LMK KG KGE N  TS + FHRG T GTK  PSSSG+K +KKKKGGQGNK   AAT+  KKAK  AKG CFH   + HW
Subjt:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW

Query:  KRNCPKYLAEKKKSKEGN
        KRNCPKYLAEKKK+K+GN
Subjt:  KRNCPKYLAEKKKSKEGN
A0A5D3DYU3 Gag/pol protein1.3e-3165.81Show/hide
Query:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW
        +MNK+ Y LT L N+L+ +E LMK KG KGE N  TS + FHRG T GTKS PSSSG+K +KKKKGGQGNK  PAA +  KKAK AAKG CFH   + HW
Subjt:  MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHW

Query:  KRNCPKYLAEKKKSKEG
        KRNCPKYLAEKKK+K+G
Subjt:  KRNCPKYLAEKKKSKEG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAATAAACTAGAATACAACCTGACCCCGCTCTTCAACAAGCTCCGGACTTACGAGTACCTCATGAAAAATAAGGGACCTAAAGGGGAGCCAAATTTTGTCACCTC
CAACAAAAACTTCCACAGAGGTTTGACATTTGGGACTAAGTCTGGACCTTCTTCTTCGGGTTCGAAAAACTTCAAGAAGAAGAAGGGTGGACAAGGGAATAAAATTGTCC
CCGCTGCTACCCAGAAGGGGAAGAAGGCTAAGGCCGCGGCCAAAGGGAAATGTTTCCACTATGGTGTTGACGAGCACTGGAAGAGGAACTGCCCGAAGTACTTGGCCGAG
AAGAAGAAATCCAAAGAAGGGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGAATAAACTAGAATACAACCTGACCCCGCTCTTCAACAAGCTCCGGACTTACGAGTACCTCATGAAAAATAAGGGACCTAAAGGGGAGCCAAATTTTGTCACCTC
CAACAAAAACTTCCACAGAGGTTTGACATTTGGGACTAAGTCTGGACCTTCTTCTTCGGGTTCGAAAAACTTCAAGAAGAAGAAGGGTGGACAAGGGAATAAAATTGTCC
CCGCTGCTACCCAGAAGGGGAAGAAGGCTAAGGCCGCGGCCAAAGGGAAATGTTTCCACTATGGTGTTGACGAGCACTGGAAGAGGAACTGCCCGAAGTACTTGGCCGAG
AAGAAGAAATCCAAAGAAGGGAATTAG
Protein sequenceShow/hide protein sequence
MMNKLEYNLTPLFNKLRTYEYLMKNKGPKGEPNFVTSNKNFHRGLTFGTKSGPSSSGSKNFKKKKGGQGNKIVPAATQKGKKAKAAAKGKCFHYGVDEHWKRNCPKYLAE
KKKSKEGN