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Moc04g21080 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g21080
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:15360227..15361186
RNA-Seq ExpressionMoc04g21080
SyntenyMoc04g21080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]1.2e-5772.57Show/hide
Query:  MHTQMRSMEAMYNEMVLAAGAGSRSENRATRMDVREQRGSHLGPAEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN-
        M TQM +ME MY+EMV AAGA SRSENR  R D+ EQRG HLGP ++  PE  E E YT QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+N 
Subjt:  MHTQMRSMEAMYNEMVLAAGAGSRSENRATRMDVREQRGSHLGPAEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN-

Query:  --PAGMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPR
          P G+ITREEFDQL+ + DAQVEALKAKCE+K+ S +DGDLGESPFTSD+LEA IP KFK PT+KPYDG+KDP+
Subjt:  --PAGMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPR

XP_022152033.1 uncharacterized protein LOC111019842 [Momordica charantia]5.1e-4088.46Show/hide
Query:  KRGSSLRKGQSPSRSHRSSNQQAESSHN---PAGMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGT
        +RGSSLRKGQSPSRSHRSSNQQAESSHN   PAG+ITREEFDQLRG+LDAQVEALKAKCEQK+ SLNDGDLGESPFTSDVLEAPIP KFKAPTVKPYDG+
Subjt:  KRGSSLRKGQSPSRSHRSSNQQAESSHN---PAGMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGT

Query:  KDPR
        +DP+
Subjt:  KDPR

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]2.7e-4157.87Show/hide
Query:  MEAMHTQMRSMEAMYNEMVLAAGAGSRSENRATRMDVREQRGSHLGPAEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS
        MEAM TQMR+ME MYN+MV  AGA SRS ++    DV EQ   H  P +EE              GDLR+HLNRKR SS R  ++ +  H++SNQQAESS
Subjt:  MEAMHTQMRSMEAMYNEMVLAAGAGSRSENRATRMDVREQRGSHLGPAEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS

Query:  HN---PAGMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPR
        +N   P G+ITREEF+QL+ + DAQVEALK +CE+K+ + +DGDLGESPFTSD+LEA IPPKFK PT+K YDG+KDP+
Subjt:  HN---PAGMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPR

XP_022158652.1 uncharacterized protein LOC111025109 [Momordica charantia]6.9e-4595.15Show/hide
Query:  NRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAGMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTK
        + KRGSSLRKGQSPSRSHRSSNQQAESSHNPAG+ITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGE PFTSDVLEAPIPPKFKAPTVKPYDGTK
Subjt:  NRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAGMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTK

Query:  DPR
        DP+
Subjt:  DPR

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]4.7e-7862.64Show/hide
Query:  MVQPANSTNTTDRRTLAASDAHQREVGAAAVEGQGHDGLAAEPLRRSARITAPALPPAHPRTSKATRGRGGTSKKGARGPAPAPTSENFDALQREMEAMH
        MVQP +STNT DRR L A+D HQREVGA  VEGQ H+GL  EP  RSARIT P L PAHP+  KA RGRGG S++   G APAP+ ENFDALQ+EMEAM 
Subjt:  MVQPANSTNTTDRRTLAASDAHQREVGAAAVEGQGHDGLAAEPLRRSARITAPALPPAHPRTSKATRGRGGTSKKGARGPAPAPTSENFDALQREMEAMH

Query:  TQMRSMEAMYNEMVLAAGAGSRSENRATRMDVREQRGSHLGPAEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPA-
        TQM +ME MYNEMV A GAGSRSE+RA R                             +RGDLR+HL+RKR SSLRKG+SPS SH++SNQQAESS+NP  
Subjt:  TQMRSMEAMYNEMVLAAGAGSRSENRATRMDVREQRGSHLGPAEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPA-

Query:  --GMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPR
          G+ITREEFDQL+ + DAQVE LKA+CE K  + +DGDLGESPFTSD+LEA IP KFK PT+KPYDG+KDP+
Subjt:  --GMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPR

TrEMBL top hitse value%identityAlignment
A0A6J1DDS5 uncharacterized protein LOC1110198422.5e-4088.46Show/hide
Query:  KRGSSLRKGQSPSRSHRSSNQQAESSHN---PAGMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGT
        +RGSSLRKGQSPSRSHRSSNQQAESSHN   PAG+ITREEFDQLRG+LDAQVEALKAKCEQK+ SLNDGDLGESPFTSDVLEAPIP KFKAPTVKPYDG+
Subjt:  KRGSSLRKGQSPSRSHRSSNQQAESSHN---PAGMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGT

Query:  KDPR
        +DP+
Subjt:  KDPR

A0A6J1DDW5 uncharacterized protein LOC1110196345.8e-5872.57Show/hide
Query:  MHTQMRSMEAMYNEMVLAAGAGSRSENRATRMDVREQRGSHLGPAEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN-
        M TQM +ME MY+EMV AAGA SRSENR  R D+ EQRG HLGP ++  PE  E E YT QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+N 
Subjt:  MHTQMRSMEAMYNEMVLAAGAGSRSENRATRMDVREQRGSHLGPAEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHN-

Query:  --PAGMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPR
          P G+ITREEFDQL+ + DAQVEALKAKCE+K+ S +DGDLGESPFTSD+LEA IP KFK PT+KPYDG+KDP+
Subjt:  --PAGMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPR

A0A6J1DPN4 uncharacterized protein LOC1110230601.3e-4157.87Show/hide
Query:  MEAMHTQMRSMEAMYNEMVLAAGAGSRSENRATRMDVREQRGSHLGPAEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS
        MEAM TQMR+ME MYN+MV  AGA SRS ++    DV EQ   H  P +EE              GDLR+HLNRKR SS R  ++ +  H++SNQQAESS
Subjt:  MEAMHTQMRSMEAMYNEMVLAAGAGSRSENRATRMDVREQRGSHLGPAEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS

Query:  HN---PAGMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPR
        +N   P G+ITREEF+QL+ + DAQVEALK +CE+K+ + +DGDLGESPFTSD+LEA IPPKFK PT+K YDG+KDP+
Subjt:  HN---PAGMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPR

A0A6J1DXR9 uncharacterized protein LOC1110251093.3e-4595.15Show/hide
Query:  NRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAGMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTK
        + KRGSSLRKGQSPSRSHRSSNQQAESSHNPAG+ITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGE PFTSDVLEAPIPPKFKAPTVKPYDGTK
Subjt:  NRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAGMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTK

Query:  DPR
        DP+
Subjt:  DPR

A0A6J1DZJ1 uncharacterized protein LOC1110257382.3e-7862.64Show/hide
Query:  MVQPANSTNTTDRRTLAASDAHQREVGAAAVEGQGHDGLAAEPLRRSARITAPALPPAHPRTSKATRGRGGTSKKGARGPAPAPTSENFDALQREMEAMH
        MVQP +STNT DRR L A+D HQREVGA  VEGQ H+GL  EP  RSARIT P L PAHP+  KA RGRGG S++   G APAP+ ENFDALQ+EMEAM 
Subjt:  MVQPANSTNTTDRRTLAASDAHQREVGAAAVEGQGHDGLAAEPLRRSARITAPALPPAHPRTSKATRGRGGTSKKGARGPAPAPTSENFDALQREMEAMH

Query:  TQMRSMEAMYNEMVLAAGAGSRSENRATRMDVREQRGSHLGPAEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPA-
        TQM +ME MYNEMV A GAGSRSE+RA R                             +RGDLR+HL+RKR SSLRKG+SPS SH++SNQQAESS+NP  
Subjt:  TQMRSMEAMYNEMVLAAGAGSRSENRATRMDVREQRGSHLGPAEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPA-

Query:  --GMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPR
          G+ITREEFDQL+ + DAQVE LKA+CE K  + +DGDLGESPFTSD+LEA IP KFK PT+KPYDG+KDP+
Subjt:  --GMITREEFDQLRGELDAQVEALKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAACCAGCGAATTCGACCAATACGACGGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCGGCGGTAGAGGGGCAAGGTCACGA
CGGCCTAGCAGCGGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGCCCTACCGCCTGCACACCCGAGGACGTCCAAGGCCACCCGTGGTCGAGGTGGGACCTCTA
AGAAGGGCGCCCGGGGTCCAGCCCCGGCTCCAACAAGCGAGAATTTTGATGCGCTCCAGAGAGAGATGGAGGCAATGCACACACAAATGCGCTCCATGGAGGCAATGTAT
AACGAAATGGTGCTAGCTGCAGGCGCAGGGTCCCGATCTGAAAATCGGGCGACGCGCATGGACGTACGCGAGCAAAGGGGTTCCCACCTCGGCCCAGCCGAGGAGGAACG
TCCCGAAGACAACGAGAGTGAGGGGTACACTCGCCAGAGGGGAGACCTCCGCGAGCATCTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGGCAGTCGCCGTCCCGCT
CCCACAGGAGCTCCAACCAGCAGGCTGAATCCTCTCACAACCCCGCAGGGATGATCACAAGGGAGGAGTTCGACCAGCTGAGGGGGGAGCTCGATGCTCAAGTGGAGGCC
TTAAAGGCCAAATGTGAGCAGAAAGACGATTCACTGAACGATGGCGACTTGGGAGAATCACCTTTCACCTCGGACGTTTTGGAAGCACCAATCCCTCCGAAGTTCAAAGC
TCCTACCGTGAAGCCTTATGACGGGACGAAGGACCCAAGGACTATGTTGAAGTCTTTGAAGGCCTCATGGACTTCCAAGCGGCATCAGACGCAATCAAATGCCGCGCCTT
TCAGATCGCGCTTATTGGCAGCGCGCGATTATGGTACCGGAGACTGCCAGCCAGGTCGATCTCGACCTACTCTCAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAACCAGCGAATTCGACCAATACGACGGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCGGCGGTAGAGGGGCAAGGTCACGA
CGGCCTAGCAGCGGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGCCCTACCGCCTGCACACCCGAGGACGTCCAAGGCCACCCGTGGTCGAGGTGGGACCTCTA
AGAAGGGCGCCCGGGGTCCAGCCCCGGCTCCAACAAGCGAGAATTTTGATGCGCTCCAGAGAGAGATGGAGGCAATGCACACACAAATGCGCTCCATGGAGGCAATGTAT
AACGAAATGGTGCTAGCTGCAGGCGCAGGGTCCCGATCTGAAAATCGGGCGACGCGCATGGACGTACGCGAGCAAAGGGGTTCCCACCTCGGCCCAGCCGAGGAGGAACG
TCCCGAAGACAACGAGAGTGAGGGGTACACTCGCCAGAGGGGAGACCTCCGCGAGCATCTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGGCAGTCGCCGTCCCGCT
CCCACAGGAGCTCCAACCAGCAGGCTGAATCCTCTCACAACCCCGCAGGGATGATCACAAGGGAGGAGTTCGACCAGCTGAGGGGGGAGCTCGATGCTCAAGTGGAGGCC
TTAAAGGCCAAATGTGAGCAGAAAGACGATTCACTGAACGATGGCGACTTGGGAGAATCACCTTTCACCTCGGACGTTTTGGAAGCACCAATCCCTCCGAAGTTCAAAGC
TCCTACCGTGAAGCCTTATGACGGGACGAAGGACCCAAGGACTATGTTGAAGTCTTTGAAGGCCTCATGGACTTCCAAGCGGCATCAGACGCAATCAAATGCCGCGCCTT
TCAGATCGCGCTTATTGGCAGCGCGCGATTATGGTACCGGAGACTGCCAGCCAGGTCGATCTCGACCTACTCTCAGCTGA
Protein sequenceShow/hide protein sequence
MVQPANSTNTTDRRTLAASDAHQREVGAAAVEGQGHDGLAAEPLRRSARITAPALPPAHPRTSKATRGRGGTSKKGARGPAPAPTSENFDALQREMEAMHTQMRSMEAMY
NEMVLAAGAGSRSENRATRMDVREQRGSHLGPAEEERPEDNESEGYTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAGMITREEFDQLRGELDAQVEA
LKAKCEQKDDSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGTKDPRTMLKSLKASWTSKRHQTQSNAAPFRSRLLAARDYGTGDCQPGRSRPTLS