; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g21180 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g21180
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr4:15409625..15410793
RNA-Seq ExpressionMoc04g21180
SyntenyMoc04g21180
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]8.6e-6160.95Show/hide
Query:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN
        E C +  A +AT+ VR  Y+RW KAN KAR YIL ++ ++LAKKHE+M+TA EI++SL++MFG+ S Q+ HD LK+I+N++M EG  V EHVL MMVHFN
Subjt:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN

Query:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG
        +A+MNGAVI+E++QVSFILESL +SFLQ RSN VMNK  Y LTT LNELQT+E ++K KG +GE NV TS + FHRGSTS TK  PS SG K  KKK  G
Subjt:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG

Query:  QENRTVSAAA
        Q N+   AAA
Subjt:  QENRTVSAAA
KAA0046844.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-6160.77Show/hide
Query:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN
        E C + +A +AT+ VR AY+RW KAN KAR Y+L ++ ++LAKK+E+M+TA EI++SL++MFG+ S Q+ HD LK+I+N++M +G  V EHVL MMV+FN
Subjt:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN

Query:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG
        +A+MNGAVI+E+NQVSFILESLL+SFLQ RSNVVMNK  Y LTT LNELQT+E ++K KG +GE NV TS + FHRGSTS TK+ PS SG K  KKK  G
Subjt:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG

Query:  QENRTVSAA
        Q N+   AA
Subjt:  QENRTVSAA
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]8.6e-6160.95Show/hide
Query:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN
        E C +  A +AT+ VR  Y+RW KAN KAR YIL ++ ++LAKKHE+M+TA EI++SL++MFG+ S Q+ HD LK+I+N++M EG  V EHVL MMVHFN
Subjt:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN

Query:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG
        +A+MNGAVI+E++QVSFILESL +SFLQ RSN VMNK  Y LTT LNELQT+E ++K KG +GE NV TS + FHRGSTS TK  PS SG K  KKK  G
Subjt:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG

Query:  QENRTVSAAA
        Q N+   AAA
Subjt:  QENRTVSAAA
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]8.6e-6160.95Show/hide
Query:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN
        E C +  A +AT+ VR  Y+RW KAN KAR YIL ++ ++LAKKHE+M+TA EI++SL++MFG+ S Q+ HD LK+I+N++M EG  V EHVL MMVHFN
Subjt:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN

Query:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG
        +A+MNGAVI+E++QVSFILESL +SFLQ RSN VMNK  Y LTT LNELQT+E ++K KG +GE NV TS + FHRGSTS TK  PS SG K  KKK  G
Subjt:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG

Query:  QENRTVSAAA
        Q N+   AAA
Subjt:  QENRTVSAAA
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]8.6e-6160.95Show/hide
Query:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN
        E C +  A +AT+ VR  Y+RW KAN KAR YIL ++ ++LAKKHE+M+TA EI++SL++MFG+ S Q+ HD LK+I+N++M EG  V EHVL MMVHFN
Subjt:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN

Query:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG
        +A+MNGAVI+E++QVSFILESL +SFLQ RSN VMNK  Y LTT LNELQT+E ++K KG +GE NV TS + FHRGSTS TK  PS SG K  KKK  G
Subjt:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG

Query:  QENRTVSAAA
        Q N+   AAA
Subjt:  QENRTVSAAA
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein4.1e-6160.95Show/hide
Query:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN
        E C +  A +AT+ VR  Y+RW KAN KAR YIL ++ ++LAKKHE+M+TA EI++SL++MFG+ S Q+ HD LK+I+N++M EG  V EHVL MMVHFN
Subjt:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN

Query:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG
        +A+MNGAVI+E++QVSFILESL +SFLQ RSN VMNK  Y LTT LNELQT+E ++K KG +GE NV TS + FHRGSTS TK  PS SG K  KKK  G
Subjt:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG

Query:  QENRTVSAAA
        Q N+   AAA
Subjt:  QENRTVSAAA
A0A5A7TU93 Gag/pol protein4.1e-6160.95Show/hide
Query:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN
        E C +  A +AT+ VR  Y+RW KAN KAR YIL ++ ++LAKKHE+M+TA EI++SL++MFG+ S Q+ HD LK+I+N++M EG  V EHVL MMVHFN
Subjt:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN

Query:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG
        +A+MNGAVI+E++QVSFILESL +SFLQ RSN VMNK  Y LTT LNELQT+E ++K KG +GE NV TS + FHRGSTS TK  PS SG K  KKK  G
Subjt:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG

Query:  QENRTVSAAA
        Q N+   AAA
Subjt:  QENRTVSAAA
A0A5A7TWB9 Gag/pol protein4.1e-6160.95Show/hide
Query:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN
        E C +  A +AT+ VR  Y+RW KAN KAR YIL ++ ++LAKKHE+M+TA EI++SL++MFG+ S Q+ HD LK+I+N++M EG  V EHVL MMVHFN
Subjt:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN

Query:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG
        +A+MNGAVI+E++QVSFILESL +SFLQ RSN VMNK  Y LTT LNELQT+E ++K KG +GE NV TS + FHRGSTS TK  PS SG K  KKK  G
Subjt:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG

Query:  QENRTVSAAA
        Q N+   AAA
Subjt:  QENRTVSAAA
A0A5D3C269 Gag/pol protein6.4e-6260.77Show/hide
Query:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN
        E C + +A +AT+ VR AY+RW KAN KAR Y+L ++ ++LAKK+E+M+TA EI++SL++MFG+ S Q+ HD LK+I+N++M +G  V EHVL MMV+FN
Subjt:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN

Query:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG
        +A+MNGAVI+E+NQVSFILESLL+SFLQ RSNVVMNK  Y LTT LNELQT+E ++K KG +GE NV TS + FHRGSTS TK+ PS SG K  KKK  G
Subjt:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG

Query:  QENRTVSAA
        Q N+   AA
Subjt:  QENRTVSAA
A0A5D3CPJ6 Gag/pol protein4.1e-6160.95Show/hide
Query:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN
        E C +  A +AT+ VR  Y+RW KAN KAR YIL ++ ++LAKKHE+M+TA EI++SL++MFG+ S Q+ HD LK+I+N++M EG  V EHVL MMVHFN
Subjt:  EACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGTFVWEHVLGMMVHFN

Query:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG
        +A+MNGAVI+E++QVSFILESL +SFLQ RSN VMNK  Y LTT LNELQT+E ++K KG +GE NV TS + FHRGSTS TK  PS SG K  KKK  G
Subjt:  MAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKKKNSG

Query:  QENRTVSAAA
        Q N+   AAA
Subjt:  QENRTVSAAA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGGGTTTCTTAGATTTTGCTCCAATATTGTCCTTCCCTACGGCGGGATTATTGGGATGGACCTTCGAGGCCTGTCTGGAAGCCGCTGCACCTGACGCCACGAA
AGTTGTTCGTTACGCATATGACAGGTGGACAAAGGCCAATTCAAAGGCCCGAGTCTACATCTTGACCAACATATATGATATTTTGGCCAAAAAGCATGAGACGATGATCA
CTGCACTAGAGATCATAGAATCATTGCGTGACATGTTTGGAAAACCTTCCTCCCAAGTCATGCACGATCTTCTCAAATTCATTTTTAACTCACAAATGAAAGAGGGAACA
TTTGTCTGGGAACATGTTCTTGGTATGATGGTCCACTTCAATATGGCGAAGATGAATGGTGCTGTCATAAATGAGTCCAACCAAGTCAGTTTTATTCTAGAGTCTCTTTT
GAAGAGCTTCCTTCAGCTTCGCAGCAACGTTGTGATGAATAAATTCGAATACAACCTGACCACGTTCCTCAACGAGCTCCAGACTTACGAGTACGTCGTGAAAAACAAGG
GACATGAAGGGGAGCCAAATGTTGTCACTTCCAACAAAAACTTCCACAGAGGTTCGACCTCGAGGACTAAGCATGGACCTTCTTTTTCGGGTTTGAAGAACTTAAAGAAG
AAGAATAGTGGACAAGAGAATAGAACTGTCTCTGCTGCTGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAAGGGTTTCTTAGATTTTGCTCCAATATTGTCCTTCCCTACGGCGGGATTATTGGGATGGACCTTCGAGGCCTGTCTGGAAGCCGCTGCACCTGACGCCACGAA
AGTTGTTCGTTACGCATATGACAGGTGGACAAAGGCCAATTCAAAGGCCCGAGTCTACATCTTGACCAACATATATGATATTTTGGCCAAAAAGCATGAGACGATGATCA
CTGCACTAGAGATCATAGAATCATTGCGTGACATGTTTGGAAAACCTTCCTCCCAAGTCATGCACGATCTTCTCAAATTCATTTTTAACTCACAAATGAAAGAGGGAACA
TTTGTCTGGGAACATGTTCTTGGTATGATGGTCCACTTCAATATGGCGAAGATGAATGGTGCTGTCATAAATGAGTCCAACCAAGTCAGTTTTATTCTAGAGTCTCTTTT
GAAGAGCTTCCTTCAGCTTCGCAGCAACGTTGTGATGAATAAATTCGAATACAACCTGACCACGTTCCTCAACGAGCTCCAGACTTACGAGTACGTCGTGAAAAACAAGG
GACATGAAGGGGAGCCAAATGTTGTCACTTCCAACAAAAACTTCCACAGAGGTTCGACCTCGAGGACTAAGCATGGACCTTCTTTTTCGGGTTTGAAGAACTTAAAGAAG
AAGAATAGTGGACAAGAGAATAGAACTGTCTCTGCTGCTGCCTAG
Protein sequenceShow/hide protein sequence
MDKGFLDFAPILSFPTAGLLGWTFEACLEAAAPDATKVVRYAYDRWTKANSKARVYILTNIYDILAKKHETMITALEIIESLRDMFGKPSSQVMHDLLKFIFNSQMKEGT
FVWEHVLGMMVHFNMAKMNGAVINESNQVSFILESLLKSFLQLRSNVVMNKFEYNLTTFLNELQTYEYVVKNKGHEGEPNVVTSNKNFHRGSTSRTKHGPSFSGLKNLKK
KNSGQENRTVSAAA