; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g21360 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g21360
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr4:15569868..15570758
RNA-Seq ExpressionMoc04g21360
SyntenyMoc04g21360
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR041373 - Reverse transcriptase, RNase H-like domain
IPR041588 - Integrase zinc-binding domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]6.4e-13074.83Show/hide
Query:  MEGPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA
        MEGP+LGIADVT+PFEVETDASD+ LGGVLLQ+GHPI YESRKLN AERRY  SEKEMLAVVHCLRA RQYLLG+ FVVKTDNS+ CHFF QPKL+SKQA
Subjt:  MEGPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA

Query:  RWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSG
        RW+E+LAEFDF+FEHK G +N+A DAL+RK EH A+C+LAHL+ S++ GS+R+ ++E LQ D AAQ ++ LA  GKTRQFWVE DLL TKGNRLYVPR+G
Subjt:  RWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSG

Query:  NLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQKSG
         LRK LL ECHDT+WAGH GWQRTY L+KKGY+WPN+RDDVMQYTKTCLICQQDKVE+ K+AGLL+PLP+P+RPWESVS++FI    K G
Subjt:  NLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQKSG

KAA0059106.1 reverse transcriptase [Cucumis melo var. makuwa]3.8e-13074.83Show/hide
Query:  MEGPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA
        MEGP+LGIADVT+PFEVETDASD+ LGGVLLQ+GHPI YESRKLN AERRY  SEKEMLAVVHCLRA RQYLLG+ FVVKTDNS+ CHFF QPKL+SKQA
Subjt:  MEGPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA

Query:  RWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSG
        RW+E+LAEFDF+FEHK G +N+A DAL+RK EH A+C+LAHL+ S++ GS+R+ ++E LQ D AAQ ++ LA  GKTRQFWVE+DL  TKGNRLYVPR+G
Subjt:  RWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSG

Query:  NLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQKSG
        NLRK LL ECHDT+WAGH GWQRTY L+KKGY+WPN+RDDVMQYTKTCLICQQDKVE+ K+AGLL+PLP+P+RPWESVS++FI    K G
Subjt:  NLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQKSG

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]6.4e-13074.83Show/hide
Query:  MEGPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA
        MEGP+LGIADVT+PFEVETDASD+ LGGVLLQ+GHPI YESRKLN AERRY  SEKEMLAVVHCLRA RQYLLG+ FVVKTDNS+ CHFF QPKL+SKQA
Subjt:  MEGPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA

Query:  RWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSG
        RW+E+LAEFDF+FEHK G +N+A DAL+RK EH A+C+LAHL+ S++ GS+R+ ++E LQ D AAQ ++ LA  GKTRQFWVE DLL TKGNRLYVPR+G
Subjt:  RWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSG

Query:  NLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQKSG
         LRK LL ECHDT+WAGH GWQRTY L+KKGY+WPN+RDDVMQYTKTCLICQQDKVE+ K+AGLL+PLP+P+RPWESVS++FI    K G
Subjt:  NLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQKSG

XP_022155185.1 uncharacterized protein LOC111022320 [Momordica charantia]4.4e-14791.46Show/hide
Query:  MEGPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA
        MEG VLGIADVTRPFEVETDASDF LGGVLLQDGHPI YES+KLNDAERRYAASEKEMLAVVHCLRA RQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA
Subjt:  MEGPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA

Query:  RWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSG
        RW+EYLAEFDFQFEHKPGRAN+A DAL+RKSE  ALCMLAHLKASKLTGSIREAI+ENLQNDPAAQAIIQLANEG TRQF VENDL FTKGN LYVPRSG
Subjt:  RWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSG

Query:  NLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLN
        NLRKLLLGECHDTMWAGHAGWQRTY L+KKGYYWP+LRDDVMQYTKTCLICQQDKVERNKIA LLEPLPIPSR WES   N
Subjt:  NLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLN

XP_023537907.1 uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]2.6e-13175Show/hide
Query:  GPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQARW
        GPVLG+ DVT+PFEVETDASDF LGGVL+Q+GHPI YESRKLNDAERRY  SEKEMLAVVHCLR  RQYLLG++FVVKTDNS+ CHFF+QPKL++KQARW
Subjt:  GPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQARW

Query:  KEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNL
        +E LAEFDF+FEHK G++N+A DAL+RK EH ALCMLAH+ +SK+ GS+R+ IKE+L  DP+A+A+++LA  GKTRQFWVE DLL TKGNRLYVPR+G L
Subjt:  KEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNL

Query:  RKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQKSG
        RK L+ ECHDT+WAGH GWQRTY LIKKGY+WPN+RDD+MQYTKTCLICQQDKVE+ K++GLLEPLP+P+RPWESVSL+FI    K G
Subjt:  RKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQKSG

TrEMBL top hitse value%identityAlignment
A0A5A7UXR6 Reverse transcriptase3.1e-13074.83Show/hide
Query:  MEGPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA
        MEGP+LGIADVT+PFEVETDASD+ LGGVLLQ+GHPI YESRKLN AERRY  SEKEMLAVVHCLRA RQYLLG+ FVVKTDNS+ CHFF QPKL+SKQA
Subjt:  MEGPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA

Query:  RWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSG
        RW+E+LAEFDF+FEHK G +N+A DAL+RK EH A+C+LAHL+ S++ GS+R+ ++E LQ D AAQ ++ LA  GKTRQFWVE DLL TKGNRLYVPR+G
Subjt:  RWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSG

Query:  NLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQKSG
         LRK LL ECHDT+WAGH GWQRTY L+KKGY+WPN+RDDVMQYTKTCLICQQDKVE+ K+AGLL+PLP+P+RPWESVS++FI    K G
Subjt:  NLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQKSG

A0A5A7UY33 Reverse transcriptase1.8e-13074.83Show/hide
Query:  MEGPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA
        MEGP+LGIADVT+PFEVETDASD+ LGGVLLQ+GHPI YESRKLN AERRY  SEKEMLAVVHCLRA RQYLLG+ FVVKTDNS+ CHFF QPKL+SKQA
Subjt:  MEGPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA

Query:  RWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSG
        RW+E+LAEFDF+FEHK G +N+A DAL+RK EH A+C+LAHL+ S++ GS+R+ ++E LQ D AAQ ++ LA  GKTRQFWVE+DL  TKGNRLYVPR+G
Subjt:  RWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSG

Query:  NLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQKSG
        NLRK LL ECHDT+WAGH GWQRTY L+KKGY+WPN+RDDVMQYTKTCLICQQDKVE+ K+AGLL+PLP+P+RPWESVS++FI    K G
Subjt:  NLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQKSG

A0A5D3BRZ6 Reverse transcriptase3.1e-13074.83Show/hide
Query:  MEGPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA
        MEGP+LGIADVT+PFEVETDASD+ LGGVLLQ+GHPI YESRKLN AERRY  SEKEMLAVVHCLRA RQYLLG+ FVVKTDNS+ CHFF QPKL+SKQA
Subjt:  MEGPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA

Query:  RWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSG
        RW+E+LAEFDF+FEHK G +N+A DAL+RK EH A+C+LAHL+ S++ GS+R+ ++E LQ D AAQ ++ LA  GKTRQFWVE DLL TKGNRLYVPR+G
Subjt:  RWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSG

Query:  NLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQKSG
         LRK LL ECHDT+WAGH GWQRTY L+KKGY+WPN+RDDVMQYTKTCLICQQDKVE+ K+AGLL+PLP+P+RPWESVS++FI    K G
Subjt:  NLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQKSG

A0A5D3C4R1 Reverse transcriptase3.1e-13074.83Show/hide
Query:  MEGPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA
        MEGP+LGIADVT+PFEVETDASD+ LGGVLLQ+GHPI YESRKLN AERRY  SEKEMLAVVHCLRA RQYLLG+ FVVKTDNS+ CHFF QPKL+SKQA
Subjt:  MEGPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA

Query:  RWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSG
        RW+E+LAEFDF+FEHK G +N+A DAL+RK EH A+C+LAHL+ S++ GS+R+ ++E LQ D AAQ ++ LA  GKTRQFWVE DLL TKGNRLYVPR+G
Subjt:  RWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSG

Query:  NLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQKSG
         LRK LL ECHDT+WAGH GWQRTY L+KKGY+WPN+RDDVMQYTKTCLICQQDKVE+ K+AGLL+PLP+P+RPWESVS++FI    K G
Subjt:  NLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQKSG

A0A6J1DLQ6 uncharacterized protein LOC1110223202.1e-14791.46Show/hide
Query:  MEGPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA
        MEG VLGIADVTRPFEVETDASDF LGGVLLQDGHPI YES+KLNDAERRYAASEKEMLAVVHCLRA RQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA
Subjt:  MEGPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQA

Query:  RWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSG
        RW+EYLAEFDFQFEHKPGRAN+A DAL+RKSE  ALCMLAHLKASKLTGSIREAI+ENLQNDPAAQAIIQLANEG TRQF VENDL FTKGN LYVPRSG
Subjt:  RWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSG

Query:  NLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLN
        NLRKLLLGECHDTMWAGHAGWQRTY L+KKGYYWP+LRDDVMQYTKTCLICQQDKVERNKIA LLEPLPIPSR WES   N
Subjt:  NLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLN

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein4.2e-3127.15Show/hide
Query:  PVLGIADVTRPFEVETDASDFTLGGVLLQDG-----HPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGA--KFVVKTDNSS-VCHFFNQPKL
        PVL   D ++   +ETDASD  +G VL Q       +P+ Y S K++ A+  Y+ S+KEMLA++  L+  R YL      F + TD+ + +    N+ + 
Subjt:  PVLGIADVTRPFEVETDASDFTLGGVLLQDG-----HPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGA--KFVVKTDNSS-VCHFFNQPKL

Query:  SSKQ-ARWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALC-------MLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLL
         +K+ ARW+ +L +F+F+  ++PG AN   DAL+R  + T           +  +    +T   +  +     ND     ++   ++       +++ LL
Subjt:  SSKQ-ARWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALC-------MLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLL

Query:  FTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQ
            +++ +P    L + ++ + H+     H G +    +I + + W  +R  + +Y + C  CQ +K   +K  G L+P+P   RPWES+S++FI    
Subjt:  FTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQ

Query:  KS
        +S
Subjt:  KS

P0CT35 Transposon Tf2-2 polyprotein4.2e-3127.15Show/hide
Query:  PVLGIADVTRPFEVETDASDFTLGGVLLQDG-----HPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGA--KFVVKTDNSS-VCHFFNQPKL
        PVL   D ++   +ETDASD  +G VL Q       +P+ Y S K++ A+  Y+ S+KEMLA++  L+  R YL      F + TD+ + +    N+ + 
Subjt:  PVLGIADVTRPFEVETDASDFTLGGVLLQDG-----HPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGA--KFVVKTDNSS-VCHFFNQPKL

Query:  SSKQ-ARWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALC-------MLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLL
         +K+ ARW+ +L +F+F+  ++PG AN   DAL+R  + T           +  +    +T   +  +     ND     ++   ++       +++ LL
Subjt:  SSKQ-ARWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALC-------MLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLL

Query:  FTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQ
            +++ +P    L + ++ + H+     H G +    +I + + W  +R  + +Y + C  CQ +K   +K  G L+P+P   RPWES+S++FI    
Subjt:  FTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQ

Query:  KS
        +S
Subjt:  KS

P0CT36 Transposon Tf2-3 polyprotein4.2e-3127.15Show/hide
Query:  PVLGIADVTRPFEVETDASDFTLGGVLLQDG-----HPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGA--KFVVKTDNSS-VCHFFNQPKL
        PVL   D ++   +ETDASD  +G VL Q       +P+ Y S K++ A+  Y+ S+KEMLA++  L+  R YL      F + TD+ + +    N+ + 
Subjt:  PVLGIADVTRPFEVETDASDFTLGGVLLQDG-----HPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGA--KFVVKTDNSS-VCHFFNQPKL

Query:  SSKQ-ARWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALC-------MLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLL
         +K+ ARW+ +L +F+F+  ++PG AN   DAL+R  + T           +  +    +T   +  +     ND     ++   ++       +++ LL
Subjt:  SSKQ-ARWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALC-------MLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLL

Query:  FTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQ
            +++ +P    L + ++ + H+     H G +    +I + + W  +R  + +Y + C  CQ +K   +K  G L+P+P   RPWES+S++FI    
Subjt:  FTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQ

Query:  KS
        +S
Subjt:  KS

P0CT41 Transposon Tf2-12 polyprotein4.2e-3127.15Show/hide
Query:  PVLGIADVTRPFEVETDASDFTLGGVLLQDG-----HPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGA--KFVVKTDNSS-VCHFFNQPKL
        PVL   D ++   +ETDASD  +G VL Q       +P+ Y S K++ A+  Y+ S+KEMLA++  L+  R YL      F + TD+ + +    N+ + 
Subjt:  PVLGIADVTRPFEVETDASDFTLGGVLLQDG-----HPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGA--KFVVKTDNSS-VCHFFNQPKL

Query:  SSKQ-ARWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALC-------MLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLL
         +K+ ARW+ +L +F+F+  ++PG AN   DAL+R  + T           +  +    +T   +  +     ND     ++   ++       +++ LL
Subjt:  SSKQ-ARWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALC-------MLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLL

Query:  FTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQ
            +++ +P    L + ++ + H+     H G +    +I + + W  +R  + +Y + C  CQ +K   +K  G L+P+P   RPWES+S++FI    
Subjt:  FTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQ

Query:  KS
        +S
Subjt:  KS

Q9UR07 Transposon Tf2-11 polyprotein4.2e-3127.15Show/hide
Query:  PVLGIADVTRPFEVETDASDFTLGGVLLQDG-----HPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGA--KFVVKTDNSS-VCHFFNQPKL
        PVL   D ++   +ETDASD  +G VL Q       +P+ Y S K++ A+  Y+ S+KEMLA++  L+  R YL      F + TD+ + +    N+ + 
Subjt:  PVLGIADVTRPFEVETDASDFTLGGVLLQDG-----HPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGA--KFVVKTDNSS-VCHFFNQPKL

Query:  SSKQ-ARWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALC-------MLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLL
         +K+ ARW+ +L +F+F+  ++PG AN   DAL+R  + T           +  +    +T   +  +     ND     ++   ++       +++ LL
Subjt:  SSKQ-ARWKEYLAEFDFQFEHKPGRANEAVDALNRKSEHTALC-------MLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLL

Query:  FTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQ
            +++ +P    L + ++ + H+     H G +    +I + + W  +R  + +Y + C  CQ +K   +K  G L+P+P   RPWES+S++FI    
Subjt:  FTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQ

Query:  KS
        +S
Subjt:  KS

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGGCCGGTGTTGGGGATTGCAGACGTCACACGACCGTTCGAAGTCGAGACTGATGCGTCAGACTTCACCCTGGGAGGAGTGCTTCTCCAAGACGGTCACCCTAT
TACGTATGAGAGTCGGAAGTTGAATGATGCTGAAAGGAGGTATGCTGCCTCCGAGAAAGAGATGTTAGCAGTAGTCCACTGCTTGAGGGCCTGTAGGCAATATCTCCTAG
GGGCCAAATTCGTTGTCAAGACCGACAACAGCTCAGTCTGTCACTTCTTCAACCAACCAAAGTTATCATCAAAGCAAGCTAGGTGGAAAGAATACCTTGCCGAGTTTGAT
TTTCAGTTCGAACATAAGCCAGGTCGAGCAAATGAGGCAGTAGATGCCCTTAACAGAAAGAGCGAACATACGGCCCTGTGCATGTTAGCTCACCTAAAAGCGAGCAAGCT
AACTGGATCCATTCGCGAAGCCATAAAAGAGAACTTACAGAATGACCCAGCTGCCCAAGCGATAATTCAATTGGCCAACGAAGGGAAGACTAGACAGTTTTGGGTGGAGA
ACGACCTCCTCTTCACCAAAGGTAACCGTTTGTACGTTCCCCGTTCTGGGAACCTAAGGAAGCTCCTACTTGGAGAATGTCATGACACGATGTGGGCAGGTCATGCTGGA
TGGCAGAGAACTTACGTCCTGATAAAGAAAGGCTACTATTGGCCGAATTTGAGAGACGACGTGATGCAATATACCAAAACGTGTCTCATCTGCCAACAGGACAAGGTTGA
GCGAAACAAAATTGCAGGTTTACTGGAACCCCTGCCAATCCCATCACGACCGTGGGAGAGTGTGTCTCTCAATTTCATCCCCACCTACCAAAAGTCGGGGAGACAGAAGC
GATCCTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGGCCGGTGTTGGGGATTGCAGACGTCACACGACCGTTCGAAGTCGAGACTGATGCGTCAGACTTCACCCTGGGAGGAGTGCTTCTCCAAGACGGTCACCCTAT
TACGTATGAGAGTCGGAAGTTGAATGATGCTGAAAGGAGGTATGCTGCCTCCGAGAAAGAGATGTTAGCAGTAGTCCACTGCTTGAGGGCCTGTAGGCAATATCTCCTAG
GGGCCAAATTCGTTGTCAAGACCGACAACAGCTCAGTCTGTCACTTCTTCAACCAACCAAAGTTATCATCAAAGCAAGCTAGGTGGAAAGAATACCTTGCCGAGTTTGAT
TTTCAGTTCGAACATAAGCCAGGTCGAGCAAATGAGGCAGTAGATGCCCTTAACAGAAAGAGCGAACATACGGCCCTGTGCATGTTAGCTCACCTAAAAGCGAGCAAGCT
AACTGGATCCATTCGCGAAGCCATAAAAGAGAACTTACAGAATGACCCAGCTGCCCAAGCGATAATTCAATTGGCCAACGAAGGGAAGACTAGACAGTTTTGGGTGGAGA
ACGACCTCCTCTTCACCAAAGGTAACCGTTTGTACGTTCCCCGTTCTGGGAACCTAAGGAAGCTCCTACTTGGAGAATGTCATGACACGATGTGGGCAGGTCATGCTGGA
TGGCAGAGAACTTACGTCCTGATAAAGAAAGGCTACTATTGGCCGAATTTGAGAGACGACGTGATGCAATATACCAAAACGTGTCTCATCTGCCAACAGGACAAGGTTGA
GCGAAACAAAATTGCAGGTTTACTGGAACCCCTGCCAATCCCATCACGACCGTGGGAGAGTGTGTCTCTCAATTTCATCCCCACCTACCAAAAGTCGGGGAGACAGAAGC
GATCCTCGTGA
Protein sequenceShow/hide protein sequence
MEGPVLGIADVTRPFEVETDASDFTLGGVLLQDGHPITYESRKLNDAERRYAASEKEMLAVVHCLRACRQYLLGAKFVVKTDNSSVCHFFNQPKLSSKQARWKEYLAEFD
FQFEHKPGRANEAVDALNRKSEHTALCMLAHLKASKLTGSIREAIKENLQNDPAAQAIIQLANEGKTRQFWVENDLLFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAG
WQRTYVLIKKGYYWPNLRDDVMQYTKTCLICQQDKVERNKIAGLLEPLPIPSRPWESVSLNFIPTYQKSGRQKRSS