; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g21390 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g21390
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPMD domain-containing protein
Genome locationchr4:15572942..15576321
RNA-Seq ExpressionMoc04g21390
SyntenyMoc04g21390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]1.5e-1434.64Show/hide
Query:  EVSNICVDAAISDVQRQVASAMWDILHKSIIHTSIDKASSFEPEARKIFHVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQLEEC
        E+S+ C D  ISD++++ A  +W+ L + II T  ++ SS EPE RKIF  ++ +   NLT L++ +D YF+    ++ ++   SS L  ++KD QL E 
Subjt:  EVSNICVDAAISDVQRQVASAMWDILHKSIIHTSIDKASSFEPEARKIFHVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQLEEC

Query:  KLSLEKILCDEQHVLKERDKLQRQYAQILQEEEELETKLKDARAKRGEVSKLI
        K  ++ +  D+  +L+E   +QR+ A++  +E +LE KLK  R +  ++S +I
Subjt:  KLSLEKILCDEQHVLKERDKLQRQYAQILQEEEELETKLKDARAKRGEVSKLI

OMO51596.1 hypothetical protein CCACVL1_29694 [Corchorus capsularis]3.7e-0525.24Show/hide
Query:  HSGMSMMSPHDLDLTVTCVRGFKV--PTDRVVVVSHPSPAIFEDRVLAHNVIY--------VDVLEVSNICVDAAISDVQRQVASAMWDILHKSIIHTSI
        HS  S+ + HD D     V   +V   + R V++   +P I   + +  N++         +   E +    D  I D Q ++A  +W+ +   I  T  
Subjt:  HSGMSMMSPHDLDLTVTCVRGFKV--PTDRVVVVSHPSPAIFEDRVLAHNVIY--------VDVLEVSNICVDAAISDVQRQVASAMWDILHKSIIHTSI

Query:  DKASSFEPEARKIFHVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQLEECKLSLEKILCDEQHVLKERDKLQRQYAQILQEEEEL
        D+      E RKIF  + G   V+ TSL+  ++EYF + A + +L+   SS+++   +  +L+     LE+ +  E   +   D L  +  ++   E+E+
Subjt:  DKASSFEPEARKIFHVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQLEECKLSLEKILCDEQHVLKERDKLQRQYAQILQEEEEL

Query:  ETKLKDARAK
         T LK+ +AK
Subjt:  ETKLKDARAK

TYK22327.1 uncharacterized protein E5676_scaffold1428G00400 [Cucumis melo var. makuwa]1.5e-0929.59Show/hide
Query:  SMMSPHDLDLTVTCVRGFKVPTDRVVVVSHPSPAIFEDRVLAHNVIYVDVLEVSNICVDAAISDVQRQVASAMWDILHKSIIHTSIDKASSFEPEARKIF
        S+ +P   D T+     FK P     V + P   I E     + +  +   E+S+      ISD++RQ A  +W+ L + I+ T  ++ +  +PE  KIF
Subjt:  SMMSPHDLDLTVTCVRGFKVPTDRVVVVSHPSPAIFEDRVLAHNVIYVDVLEVSNICVDAAISDVQRQVASAMWDILHKSIIHTSIDKASSFEPEARKIF

Query:  HVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQLEECKLSLEKILCDEQHVLKER
          ++ +   NLT L++ MD YF+   T  N   + S+ +  ++KD QL + K  ++ +  DE H+LKE+
Subjt:  HVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQLEECKLSLEKILCDEQHVLKER

XP_031739998.1 uncharacterized protein LOC116403342 [Cucumis sativus]8.3e-1333.33Show/hide
Query:  VDVLEVSNICVDAAISDVQRQVASAMWDILHKSIIHTSIDKASSFEPEARKIFHVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQ
        + V E+S+ C D+ ISD++RQ A  +W+ L + II T  ++ SS EPE  KIF  ++     NL  L++ ++ YF+    ++ +    SS L  ++KD Q
Subjt:  VDVLEVSNICVDAAISDVQRQVASAMWDILHKSIIHTSIDKASSFEPEARKIFHVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQ

Query:  LEECKLSLEKILCDEQHVLKERDKLQRQYAQILQEEEELETKLKDARAKRGEVSKLILE
        L E K  ++ +  DE  +L E +  +R   ++  +E +LE KLK  RA+  + S +I +
Subjt:  LEECKLSLEKILCDEQHVLKERDKLQRQYAQILQEEEELETKLKDARAKRGEVSKLILE

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]9.8e-1433.33Show/hide
Query:  VDVLEVSNICVDAAISDVQRQVASAMWDILHKSIIHTSIDKASSFEPEARKIFHVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQ
        + V E+S+ C D+ ISD++RQ A  +W+ L + II T  ++ SS EPE  KIF  ++ +   NL  L++ ++ YF+    ++ +    SS L  ++KD Q
Subjt:  VDVLEVSNICVDAAISDVQRQVASAMWDILHKSIIHTSIDKASSFEPEARKIFHVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQ

Query:  LEECKLSLEKILCDEQHVLKERDKLQRQYAQILQEEEELETKLKDARAKRGEVSKLILE
        L E K  ++ +  DE  +L E +  +R+  ++  +E +LE KLK  RA+  ++S +I +
Subjt:  LEECKLSLEKILCDEQHVLKERDKLQRQYAQILQEEEELETKLKDARAKRGEVSKLILE

TrEMBL top hitse value%identityAlignment
A0A1R3G0I8 Uncharacterized protein1.8e-0525.24Show/hide
Query:  HSGMSMMSPHDLDLTVTCVRGFKV--PTDRVVVVSHPSPAIFEDRVLAHNVIY--------VDVLEVSNICVDAAISDVQRQVASAMWDILHKSIIHTSI
        HS  S+ + HD D     V   +V   + R V++   +P I   + +  N++         +   E +    D  I D Q ++A  +W+ +   I  T  
Subjt:  HSGMSMMSPHDLDLTVTCVRGFKV--PTDRVVVVSHPSPAIFEDRVLAHNVIY--------VDVLEVSNICVDAAISDVQRQVASAMWDILHKSIIHTSI

Query:  DKASSFEPEARKIFHVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQLEECKLSLEKILCDEQHVLKERDKLQRQYAQILQEEEEL
        D+      E RKIF  + G   V+ TSL+  ++EYF + A + +L+   SS+++   +  +L+     LE+ +  E   +   D L  +  ++   E+E+
Subjt:  DKASSFEPEARKIFHVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQLEECKLSLEKILCDEQHVLKERDKLQRQYAQILQEEEEL

Query:  ETKLKDARAK
         T LK+ +AK
Subjt:  ETKLKDARAK

A0A5A7TYW3 Uncharacterized protein2.4e-0522.62Show/hide
Query:  LGDFVENTDQQHSGMSMMSPHDLDLTVTCVRGFKVPTDRVVVVSHPSPAIFEDRVLAHNVIYVDVLEVSNICVDAAISDVQRQVASAMWDILHKSIIHTS
        L D +E   +  S  S+  PH +  T   V   K P +++   S    A+ E+ +    +      E S    +  +S+  ++ A  MW+ +   I+ T 
Subjt:  LGDFVENTDQQHSGMSMMSPHDLDLTVTCVRGFKVPTDRVVVVSHPSPAIFEDRVLAHNVIYVDVLEVSNICVDAAISDVQRQVASAMWDILHKSIIHTS

Query:  IDKASSFEPEARKIFHVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQLEECKLSLEKILCDEQHVLKERDKLQRQYAQILQEEEE
         +      PE   +   +   H   LTSL+++++ Y ++   ++++Q   S QL    K RQL E   ++++ L   + +  +   +Q + A++  E +E
Subjt:  IDKASSFEPEARKIFHVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQLEECKLSLEKILCDEQHVLKERDKLQRQYAQILQEEEE

Query:  LETKLKDARAKRGEVSKLILE
        LE +L+    +  ++S L  E
Subjt:  LETKLKDARAKRGEVSKLILE

A0A5A7U4C3 Uncharacterized protein7.3e-1534.64Show/hide
Query:  EVSNICVDAAISDVQRQVASAMWDILHKSIIHTSIDKASSFEPEARKIFHVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQLEEC
        E+S+ C D  ISD++++ A  +W+ L + II T  ++ SS EPE RKIF  ++ +   NLT L++ +D YF+    ++ ++   SS L  ++KD QL E 
Subjt:  EVSNICVDAAISDVQRQVASAMWDILHKSIIHTSIDKASSFEPEARKIFHVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQLEEC

Query:  KLSLEKILCDEQHVLKERDKLQRQYAQILQEEEELETKLKDARAKRGEVSKLI
        K  ++ +  D+  +L+E   +QR+ A++  +E +LE KLK  R +  ++S +I
Subjt:  KLSLEKILCDEQHVLKERDKLQRQYAQILQEEEELETKLKDARAKRGEVSKLI

A0A5D3BW91 Uncharacterized protein5.2e-0524.32Show/hide
Query:  DAAISDVQRQVASAMWDILHKSIIHTSIDKASSFEPEARKIFHVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQLEECKLSLEKI
        +  +S+  ++ A  MW+ +   I+ TS +      PE   +   +   H   LTSL+++++ Y ++   ++++Q   S+QL    K RQL E   ++++ 
Subjt:  DAAISDVQRQVASAMWDILHKSIIHTSIDKASSFEPEARKIFHVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQLEECKLSLEKI

Query:  LCDEQHVLKERDKLQRQYAQILQEEEELETKLKDARAKRGEVSKLILE
        L   + +  +   +Q + A++  E +ELE +L+   A+  ++S L  E
Subjt:  LCDEQHVLKERDKLQRQYAQILQEEEELETKLKDARAKRGEVSKLILE

A0A5D3DF65 Uncharacterized protein7.1e-1029.59Show/hide
Query:  SMMSPHDLDLTVTCVRGFKVPTDRVVVVSHPSPAIFEDRVLAHNVIYVDVLEVSNICVDAAISDVQRQVASAMWDILHKSIIHTSIDKASSFEPEARKIF
        S+ +P   D T+     FK P     V + P   I E     + +  +   E+S+      ISD++RQ A  +W+ L + I+ T  ++ +  +PE  KIF
Subjt:  SMMSPHDLDLTVTCVRGFKVPTDRVVVVSHPSPAIFEDRVLAHNVIYVDVLEVSNICVDAAISDVQRQVASAMWDILHKSIIHTSIDKASSFEPEARKIF

Query:  HVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQLEECKLSLEKILCDEQHVLKER
          ++ +   NLT L++ MD YF+   T  N   + S+ +  ++KD QL + K  ++ +  DE H+LKE+
Subjt:  HVLSGTHVVNLTSLQDFMDEYFEKAATYDNLQPLVSSQLTLASKDRQLEECKLSLEKILCDEQHVLKER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGGGCCGATGCACAGTTCGAAGCCTTGGGGATAAATGTCAAGGTTGAACGCCAAGCTTCTGTAGAAGAGTGTCGGGGCCTTGGGGATAAATGGCAAGGG
CCGATACAATTCGAGGAGTCCAACGTCGAGCACCGTAGAGAAGTGTCGATGCCTTGGCTATGCGAGGTCAGGGGTCGGTGCGACTCGAAGGATTTTGCAGCTATC
CTTGGGGATTTCGTTGAAAATACAGATCAGCAACATAGTGGAATGTCTATGATGAGTCCTCATGACCTTGATCTTACTGTTACTTGTGTTAGAGGTTTCAAGGTG
CCAACTGACAGGGTTGTAGTCGTTTCTCATCCTTCACCTGCAATTTTTGAGGATCGTGTACTAGCCCACAATGTGATCTATGTTGATGTTCTTGAAGTCTCCAAC
ATATGTGTTGATGCTGCAATTTCTGACGTTCAACGACAAGTTGCTTCAGCTATGTGGGACATTCTACATAAGAGTATTATACACACTTCAATTGATAAAGCTTCA
TCTTTTGAACCAGAGGCGCGTAAAATTTTTCATGTTCTTTCAGGGACACATGTAGTTAATCTTACTTCTCTCCAAGATTTTATGGATGAATATTTTGAGAAGGCG
GCAACTTACGACAACCTACAACCCTTAGTTTCTTCTCAACTGACTTTGGCAAGTAAGGACCGCCAATTGGAGGAGTGCAAACTTAGTTTGGAGAAGATATTATGT
GACGAGCAGCATGTCCTTAAGGAGAGAGACAAGCTACAACGACAATATGCACAAATATTGCAAGAGGAGGAAGAGTTGGAAACCAAACTTAAAGATGCTCGGGCT
AAACGAGGTGAGGTTTCCAAGCTTATTCTCGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAAGGGCCGATGCACAGTTCGAAGCCTTGGGGATAAATGTCAAGGTTGAACGCCAAGCTTCTGTAGAAGAGTGTCGGGGCCTTGGGGATAAATGGCAAGGG
CCGATACAATTCGAGGAGTCCAACGTCGAGCACCGTAGAGAAGTGTCGATGCCTTGGCTATGCGAGGTCAGGGGTCGGTGCGACTCGAAGGATTTTGCAGCTATC
CTTGGGGATTTCGTTGAAAATACAGATCAGCAACATAGTGGAATGTCTATGATGAGTCCTCATGACCTTGATCTTACTGTTACTTGTGTTAGAGGTTTCAAGGTG
CCAACTGACAGGGTTGTAGTCGTTTCTCATCCTTCACCTGCAATTTTTGAGGATCGTGTACTAGCCCACAATGTGATCTATGTTGATGTTCTTGAAGTCTCCAAC
ATATGTGTTGATGCTGCAATTTCTGACGTTCAACGACAAGTTGCTTCAGCTATGTGGGACATTCTACATAAGAGTATTATACACACTTCAATTGATAAAGCTTCA
TCTTTTGAACCAGAGGCGCGTAAAATTTTTCATGTTCTTTCAGGGACACATGTAGTTAATCTTACTTCTCTCCAAGATTTTATGGATGAATATTTTGAGAAGGCG
GCAACTTACGACAACCTACAACCCTTAGTTTCTTCTCAACTGACTTTGGCAAGTAAGGACCGCCAATTGGAGGAGTGCAAACTTAGTTTGGAGAAGATATTATGT
GACGAGCAGCATGTCCTTAAGGAGAGAGACAAGCTACAACGACAATATGCACAAATATTGCAAGAGGAGGAAGAGTTGGAAACCAAACTTAAAGATGCTCGGGCT
AAACGAGGTGAGGTTTCCAAGCTTATTCTCGAGTAG
Protein sequenceShow/hide protein sequence
MSRADAQFEALGINVKVERQASVEECRGLGDKWQGPIQFEESNVEHRREVSMPWLCEVRGRCDSKDFAAILGDFVENTDQQHSGMSMMSPHDLDLTVTCVRGFKV
PTDRVVVVSHPSPAIFEDRVLAHNVIYVDVLEVSNICVDAAISDVQRQVASAMWDILHKSIIHTSIDKASSFEPEARKIFHVLSGTHVVNLTSLQDFMDEYFEKA
ATYDNLQPLVSSQLTLASKDRQLEECKLSLEKILCDEQHVLKERDKLQRQYAQILQEEEELETKLKDARAKRGEVSKLILE