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Moc04g21440 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g21440
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:15610020..15617701
RNA-Seq ExpressionMoc04g21440
SyntenyMoc04g21440
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046765.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]8.3e-4353.95Show/hide
Query:  IQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITLEVDSECENALDEDDVAYLSRKYKNFIKSKKQFKKHFSNHKE-----------
        IQE KDL  L ++ELIGSLMTHEI + +++EDE KKK K+IALKTI+LEVD E E+ LD+DD+ YLSRKYKNFIK KK FKKH S  KE           
Subjt:  IQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITLEVDSECENALDEDDVAYLSRKYKNFIKSKKQFKKHFSNHKE-----------

Query:  --------------------LKKSNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDEICLKASKKSKWYLDNGYSRHMIGDQSKFVTLSKK
                             KKS KK+MK TWD+S E  SESE E++     M HSDKEDEQDDE+ LK  K+SKW     YSRH+ GDQSK ++  KK
Subjt:  --------------------LKKSNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDEICLKASKKSKWYLDNGYSRHMIGDQSKFVTLSKK

Query:  DEGFVTFGDNKKGKI
        D G  TFGDN KG +
Subjt:  DEGFVTFGDNKKGKI

RVW36924.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]3.7e-3540.71Show/hide
Query:  SKQEPKVTIIQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITL-EVDSECENALDE-DDVAYLSRKYKNFIKSKKQFKKHF-----
        SK   KVT IQE KDL  L ++ELIGSLMT+EI + K +++ + KK+K+IALK  T  E D E E   DE DD+A ++RK   +++ +   +K F     
Subjt:  SKQEPKVTIIQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITL-EVDSECENALDE-DDVAYLSRKYKNFIKSKKQFKKHF-----

Query:  ---SNHK--------ELKKSNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDEICLKASKKSKWYLDNGYSRHMIGDQSKFVTLSKKDEGF
             HK        E K+  KK+M  TW  S+ES  E   +EVAN CFM   D ++          SKK KW+LD+G SRHM GD+SKF  L+K+  G+
Subjt:  ---SNHK--------ELKKSNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDEICLKASKKSKWYLDNGYSRHMIGDQSKFVTLSKKDEGF

Query:  VTFGDNKKGKII-------ERNFGALLVSDKSKE---IASSKQEVS----MNENKVDGSSS--MPKEWKYAPSHPKDLIL
        VTFGDN KG+II       E + G L + D+ ++   +   K+E S        +V G SS  +PK+WK+  +HP+D I+
Subjt:  VTFGDNKKGKII-------ERNFGALLVSDKSKE---IASSKQEVS----MNENKVDGSSS--MPKEWKYAPSHPKDLIL

TYK29684.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]1.8e-3753.47Show/hide
Query:  IQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITLEVDSECENALDEDDVAYLSRKYKNFIKSKKQFKKHFSNHKE-----------
        IQE KDL  L ++ELIGSLMTHEI + +++EDE KKK K+IALKTI+LEVD E E+ LD+DD+ YLSRKYKNFIK KK FKKH S  KE           
Subjt:  IQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITLEVDSECENALDEDDVAYLSRKYKNFIKSKKQFKKHFSNHKE-----------

Query:  --------------------LKKSNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDEICLKASKKSKWYLDNGYSRHMIGDQSKFVTLSKK
                             KKS KK+MK TWD+S E  SESE E++     M HSDKEDEQDDE+ LKA K+SKW     YSRH+ GDQSK ++  K+
Subjt:  --------------------LKKSNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDEICLKASKKSKWYLDNGYSRHMIGDQSKFVTLSKK

Query:  DE
         E
Subjt:  DE

XP_022156978.1 uncharacterized protein LOC111023806 [Momordica charantia]7.4e-5244.13Show/hide
Query:  KQEPKVTIIQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITLEVDSECENALDEDDVAYLSRKYKNFIKSKKQFKKHFSNHKELKK
        K EPKVTIIQE KDLKTLS+DELIGSLMTHEIKIKKNMEDEKKKK+K+IALK ITLEVD E EN LDEDDVAYLSRK    +             K  KK
Subjt:  KQEPKVTIIQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITLEVDSECENALDEDDVAYLSRKYKNFIKSKKQFKKHFSNHKELKK

Query:  SNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDE---------------------------------------------------------
        S KK+MK TWD+SDESGSESENEEVANFCFM HSDKEDEQDDE                                                         
Subjt:  SNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDE---------------------------------------------------------

Query:  ------------------------------------------------------------------------------------ICLKASKKSKWYLDNG
                                                                                            +CLKASKKSKWYLD+ 
Subjt:  ------------------------------------------------------------------------------------ICLKASKKSKWYLDNG

Query:  YSRHMIGDQSKFVTLSKKDEGFVTFGDNKKGKIIER----NFGALLVSD
         SRHM GDQSKFVT SK D GFVTFGDNKKGKII +    N  ++L+ D
Subjt:  YSRHMIGDQSKFVTLSKKDEGFVTFGDNKKGKIIER----NFGALLVSD

XP_022158792.1 uncharacterized protein LOC111025259 [Momordica charantia]9.7e-6848.53Show/hide
Query:  EPKVTIIQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITLEVDSECENALDEDDVAYLSRKYKNFIKSKKQFKKHFSNHKEL----
        EPKVT IQE KDLKTLS+DELIG                                     ENALDEDDVAYLSRKYKNFIK KKQFKK+FSN KE     
Subjt:  EPKVTIIQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITLEVDSECENALDEDDVAYLSRKYKNFIKSKKQFKKHFSNHKEL----

Query:  ---------------------------KKSNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDEI---------------------------
                                   KKS KK+MK TWD+SDESG+ESENEEVANFCFM HSDKEDE+DDEI                           
Subjt:  ---------------------------KKSNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDEI---------------------------

Query:  -----------------------------------------------------------------CLKASKKSKWYLDNGYSRHMIGDQSKFVTLSKKDE
                                                                         CLKASKK KWYLD+G SR+M GDQSKFVT SKKD 
Subjt:  -----------------------------------------------------------------CLKASKKSKWYLDNGYSRHMIGDQSKFVTLSKKDE

Query:  GFVTFGDNKKGKIIERNFGALLVSDKSKEIASSKQEVSMNENKVDGSSSMPKEWKYAPSHPKDLILGDP--GKLA
        GFVTFGD+KK    ERNFG LLVSDKSKEI SSKQEVS+NENKVDG SSMPKEWKYAPSHPKDLILGDP  GK+A
Subjt:  GFVTFGDNKKGKIIERNFGALLVSDKSKEIASSKQEVSMNENKVDGSSSMPKEWKYAPSHPKDLILGDP--GKLA

TrEMBL top hitse value%identityAlignment
A0A438DNB1 Retrovirus-related Pol polyprotein from transposon RE11.8e-3540.71Show/hide
Query:  SKQEPKVTIIQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITL-EVDSECENALDE-DDVAYLSRKYKNFIKSKKQFKKHF-----
        SK   KVT IQE KDL  L ++ELIGSLMT+EI + K +++ + KK+K+IALK  T  E D E E   DE DD+A ++RK   +++ +   +K F     
Subjt:  SKQEPKVTIIQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITL-EVDSECENALDE-DDVAYLSRKYKNFIKSKKQFKKHF-----

Query:  ---SNHK--------ELKKSNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDEICLKASKKSKWYLDNGYSRHMIGDQSKFVTLSKKDEGF
             HK        E K+  KK+M  TW  S+ES  E   +EVAN CFM   D ++          SKK KW+LD+G SRHM GD+SKF  L+K+  G+
Subjt:  ---SNHK--------ELKKSNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDEICLKASKKSKWYLDNGYSRHMIGDQSKFVTLSKKDEGF

Query:  VTFGDNKKGKII-------ERNFGALLVSDKSKE---IASSKQEVS----MNENKVDGSSS--MPKEWKYAPSHPKDLIL
        VTFGDN KG+II       E + G L + D+ ++   +   K+E S        +V G SS  +PK+WK+  +HP+D I+
Subjt:  VTFGDNKKGKII-------ERNFGALLVSDKSKE---IASSKQEVS----MNENKVDGSSS--MPKEWKYAPSHPKDLIL

A0A5A7TZF4 Zf-CCHC domain-containing protein/UBN2 domain-containing protein4.0e-4353.95Show/hide
Query:  IQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITLEVDSECENALDEDDVAYLSRKYKNFIKSKKQFKKHFSNHKE-----------
        IQE KDL  L ++ELIGSLMTHEI + +++EDE KKK K+IALKTI+LEVD E E+ LD+DD+ YLSRKYKNFIK KK FKKH S  KE           
Subjt:  IQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITLEVDSECENALDEDDVAYLSRKYKNFIKSKKQFKKHFSNHKE-----------

Query:  --------------------LKKSNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDEICLKASKKSKWYLDNGYSRHMIGDQSKFVTLSKK
                             KKS KK+MK TWD+S E  SESE E++     M HSDKEDEQDDE+ LK  K+SKW     YSRH+ GDQSK ++  KK
Subjt:  --------------------LKKSNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDEICLKASKKSKWYLDNGYSRHMIGDQSKFVTLSKK

Query:  DEGFVTFGDNKKGKI
        D G  TFGDN KG +
Subjt:  DEGFVTFGDNKKGKI

A0A5D3E1G2 Zf-CCHC domain-containing protein/UBN2 domain-containing protein8.6e-3853.47Show/hide
Query:  IQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITLEVDSECENALDEDDVAYLSRKYKNFIKSKKQFKKHFSNHKE-----------
        IQE KDL  L ++ELIGSLMTHEI + +++EDE KKK K+IALKTI+LEVD E E+ LD+DD+ YLSRKYKNFIK KK FKKH S  KE           
Subjt:  IQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITLEVDSECENALDEDDVAYLSRKYKNFIKSKKQFKKHFSNHKE-----------

Query:  --------------------LKKSNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDEICLKASKKSKWYLDNGYSRHMIGDQSKFVTLSKK
                             KKS KK+MK TWD+S E  SESE E++     M HSDKEDEQDDE+ LKA K+SKW     YSRH+ GDQSK ++  K+
Subjt:  --------------------LKKSNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDEICLKASKKSKWYLDNGYSRHMIGDQSKFVTLSKK

Query:  DE
         E
Subjt:  DE

A0A6J1DS74 uncharacterized protein LOC1110238063.6e-5244.13Show/hide
Query:  KQEPKVTIIQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITLEVDSECENALDEDDVAYLSRKYKNFIKSKKQFKKHFSNHKELKK
        K EPKVTIIQE KDLKTLS+DELIGSLMTHEIKIKKNMEDEKKKK+K+IALK ITLEVD E EN LDEDDVAYLSRK    +             K  KK
Subjt:  KQEPKVTIIQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITLEVDSECENALDEDDVAYLSRKYKNFIKSKKQFKKHFSNHKELKK

Query:  SNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDE---------------------------------------------------------
        S KK+MK TWD+SDESGSESENEEVANFCFM HSDKEDEQDDE                                                         
Subjt:  SNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDE---------------------------------------------------------

Query:  ------------------------------------------------------------------------------------ICLKASKKSKWYLDNG
                                                                                            +CLKASKKSKWYLD+ 
Subjt:  ------------------------------------------------------------------------------------ICLKASKKSKWYLDNG

Query:  YSRHMIGDQSKFVTLSKKDEGFVTFGDNKKGKIIER----NFGALLVSD
         SRHM GDQSKFVT SK D GFVTFGDNKKGKII +    N  ++L+ D
Subjt:  YSRHMIGDQSKFVTLSKKDEGFVTFGDNKKGKIIER----NFGALLVSD

A0A6J1DY46 uncharacterized protein LOC1110252594.7e-6848.53Show/hide
Query:  EPKVTIIQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITLEVDSECENALDEDDVAYLSRKYKNFIKSKKQFKKHFSNHKEL----
        EPKVT IQE KDLKTLS+DELIG                                     ENALDEDDVAYLSRKYKNFIK KKQFKK+FSN KE     
Subjt:  EPKVTIIQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITLEVDSECENALDEDDVAYLSRKYKNFIKSKKQFKKHFSNHKEL----

Query:  ---------------------------KKSNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDEI---------------------------
                                   KKS KK+MK TWD+SDESG+ESENEEVANFCFM HSDKEDE+DDEI                           
Subjt:  ---------------------------KKSNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDEI---------------------------

Query:  -----------------------------------------------------------------CLKASKKSKWYLDNGYSRHMIGDQSKFVTLSKKDE
                                                                         CLKASKK KWYLD+G SR+M GDQSKFVT SKKD 
Subjt:  -----------------------------------------------------------------CLKASKKSKWYLDNGYSRHMIGDQSKFVTLSKKDE

Query:  GFVTFGDNKKGKIIERNFGALLVSDKSKEIASSKQEVSMNENKVDGSSSMPKEWKYAPSHPKDLILGDP--GKLA
        GFVTFGD+KK    ERNFG LLVSDKSKEI SSKQEVS+NENKVDG SSMPKEWKYAPSHPKDLILGDP  GK+A
Subjt:  GFVTFGDNKKGKIIERNFGALLVSDKSKEIASSKQEVSMNENKVDGSSSMPKEWKYAPSHPKDLILGDP--GKLA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTCAACCATCGTGCGGGGCCGAAGGCGTTTGCTATAATTGCCAAGGAGAAGAAAGAGGAATATGGAGGTGACAATTTTAGTGAAATCGATCTGTTCAAA
GAGATGAGATACTCCGAAGCTAAAGGTTGGGTCGAAGGTGTGGAGACAGCTTATCTAGACATGATGCGCATTAGAGAAGAATCTATGCAGGATGGTGACAAACCA
ATGTCAGACCCAGAAGTACTGGAAACAGTTCTCGGGCATCGATCAGGCTACGTTAAAAGTGCTGGTTGGGACCCGAAACCTAAATCTCACACAGATTCTGAGATT
ACGGGTCTACGCGGTGAAATGTTAGATTTGAAATCCATGATGCTAGAATTTATGGGTCGTTTTGGTGGAGCCAACTCATCAAAACAGGAGCCTAAAGTCACCATC
ATTCAAGAGGTAAAGGATCTCAAGACTCTCTCCGTGGACGAACTCATTGGCTCGTTGATGACACATGAGATAAAGATCAAGAAAAACATGGAGGATGAGAAGAAA
AAGAAAGAGAAGAATATAGCATTGAAGACCATCACCTTGGAAGTTGACTCCGAATGTGAGAATGCTCTTGATGAAGATGATGTGGCATATCTCTCACGTAAGTAT
AAAAATTTCATTAAGAGTAAGAAACAATTCAAGAAGCATTTCTCCAACCACAAAGAGTTAAAGAAATCCAATAAGAAATCAATGAAGCCTACTTGGGATAATAGT
GATGAAAGTGGAAGTGAAAGTGAGAATGAAGAAGTAGCCAACTTTTGCTTCATGACTCATAGTGACAAAGAGGATGAACAAGATGATGAGATTTGTTTGAAAGCT
TCCAAGAAAAGCAAGTGGTATTTGGATAATGGTTACTCGAGGCACATGATAGGAGATCAATCCAAGTTTGTCACTCTCTCCAAAAAGGATGAAGGTTTTGTAACC
TTTGGTGACAACAAGAAAGGTAAAATAATAGAAAGAAATTTTGGAGCTTTACTTGTTAGTGACAAAAGCAAAGAGATTGCTTCAAGTAAGCAAGAAGTGAGCATG
AATGAAAATAAGGTGGACGGTTCTTCATCCATGCCTAAGGAGTGGAAGTATGCCCCATCTCATCCTAAGGATTTAATCCTTGGTGATCCCGGCAAGCTTGCTATT
GTCGCTGTTGCTAAGCCCGCTGCGGATGCTGCACTGGTGCTTAGTCCACCGAGGCCAGTTCAATTGTCACTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCATTCAACCATCGTGCGGGGCCGAAGGCGTTTGCTATAATTGCCAAGGAGAAGAAAGAGGAATATGGAGGTGACAATTTTAGTGAAATCGATCTGTTCAAA
GAGATGAGATACTCCGAAGCTAAAGGTTGGGTCGAAGGTGTGGAGACAGCTTATCTAGACATGATGCGCATTAGAGAAGAATCTATGCAGGATGGTGACAAACCA
ATGTCAGACCCAGAAGTACTGGAAACAGTTCTCGGGCATCGATCAGGCTACGTTAAAAGTGCTGGTTGGGACCCGAAACCTAAATCTCACACAGATTCTGAGATT
ACGGGTCTACGCGGTGAAATGTTAGATTTGAAATCCATGATGCTAGAATTTATGGGTCGTTTTGGTGGAGCCAACTCATCAAAACAGGAGCCTAAAGTCACCATC
ATTCAAGAGGTAAAGGATCTCAAGACTCTCTCCGTGGACGAACTCATTGGCTCGTTGATGACACATGAGATAAAGATCAAGAAAAACATGGAGGATGAGAAGAAA
AAGAAAGAGAAGAATATAGCATTGAAGACCATCACCTTGGAAGTTGACTCCGAATGTGAGAATGCTCTTGATGAAGATGATGTGGCATATCTCTCACGTAAGTAT
AAAAATTTCATTAAGAGTAAGAAACAATTCAAGAAGCATTTCTCCAACCACAAAGAGTTAAAGAAATCCAATAAGAAATCAATGAAGCCTACTTGGGATAATAGT
GATGAAAGTGGAAGTGAAAGTGAGAATGAAGAAGTAGCCAACTTTTGCTTCATGACTCATAGTGACAAAGAGGATGAACAAGATGATGAGATTTGTTTGAAAGCT
TCCAAGAAAAGCAAGTGGTATTTGGATAATGGTTACTCGAGGCACATGATAGGAGATCAATCCAAGTTTGTCACTCTCTCCAAAAAGGATGAAGGTTTTGTAACC
TTTGGTGACAACAAGAAAGGTAAAATAATAGAAAGAAATTTTGGAGCTTTACTTGTTAGTGACAAAAGCAAAGAGATTGCTTCAAGTAAGCAAGAAGTGAGCATG
AATGAAAATAAGGTGGACGGTTCTTCATCCATGCCTAAGGAGTGGAAGTATGCCCCATCTCATCCTAAGGATTTAATCCTTGGTGATCCCGGCAAGCTTGCTATT
GTCGCTGTTGCTAAGCCCGCTGCGGATGCTGCACTGGTGCTTAGTCCACCGAGGCCAGTTCAATTGTCACTGTGA
Protein sequenceShow/hide protein sequence
MSFNHRAGPKAFAIIAKEKKEEYGGDNFSEIDLFKEMRYSEAKGWVEGVETAYLDMMRIREESMQDGDKPMSDPEVLETVLGHRSGYVKSAGWDPKPKSHTDSEI
TGLRGEMLDLKSMMLEFMGRFGGANSSKQEPKVTIIQEVKDLKTLSVDELIGSLMTHEIKIKKNMEDEKKKKEKNIALKTITLEVDSECENALDEDDVAYLSRKY
KNFIKSKKQFKKHFSNHKELKKSNKKSMKPTWDNSDESGSESENEEVANFCFMTHSDKEDEQDDEICLKASKKSKWYLDNGYSRHMIGDQSKFVTLSKKDEGFVT
FGDNKKGKIIERNFGALLVSDKSKEIASSKQEVSMNENKVDGSSSMPKEWKYAPSHPKDLILGDPGKLAIVAVAKPAADAALVLSPPRPVQLSL