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Moc04g21740 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g21740
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:15830344..15831606
RNA-Seq ExpressionMoc04g21740
SyntenyMoc04g21740
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142775.1 protein NYNRIN-like [Momordica charantia]1.1e-2769.66Show/hide
Query:  VAVGSHRVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRIQGHVSTLDPSWEGPFQVKGIV
        + + + R++ Y+  RNEEELLLNLDLL+ KRE+AQLRL EYQ+R+ RHYNS VRPRSFQVGHLVLR++Q HV+TL+PSWEG F+VKGIV
Subjt:  VAVGSHRVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRIQGHVSTLDPSWEGPFQVKGIV

XP_022156049.1 uncharacterized protein LOC111023017 [Momordica charantia]2.2e-2855.86Show/hide
Query:  RVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRIQGHVSTLDPSWEGPFQVKGIVRPGTYMLADLEGRVLAH
        RVE +D   N E  LLNLDLLE KR  +QL+L EYQ+RMAR+YN+R R R+F+ G L L+++  HV  L+P+WEGP++V  +VRP  Y+L+DL GR L H
Subjt:  RVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRIQGHVSTLDPSWEGPFQVKGIVRPGTYMLADLEGRVLAH

Query:  PWNVEHLKRYY
        PWN E L+ YY
Subjt:  PWNVEHLKRYY

XP_022156070.1 uncharacterized protein K02A2.6-like [Momordica charantia]4.5e-3771.03Show/hide
Query:  VAVGSHRVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRIQGHVSTLDPSWEGPFQVKGIVRPGTYMLADLE
        + + + RVE Y+  RNEEELLL LDL++ KRE AQLRL EYQ++MARHYNSRVR RSFQ+G+LVLR++Q HV  L+PSWEGPF+VKGIVRPGTYMLADLE
Subjt:  VAVGSHRVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRIQGHVSTLDPSWEGPFQVKGIVRPGTYMLADLE

Query:  GRVLAHP
        G++L+HP
Subjt:  GRVLAHP

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]1.8e-3055.56Show/hide
Query:  VAVGSHRVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRIQGHVSTLDPSWEGPFQVKGIVRPGTYMLADLE
        V + + RVE +D   N E LL+NLDLLE KR  +QLRL EYQ+RMAR+YN+RV+ R+F+   LVL+++  HV  L+P+WEGP++V  I+RP  Y+L+DL 
Subjt:  VAVGSHRVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRIQGHVSTLDPSWEGPFQVKGIVRPGTYMLADLE

Query:  GRVLAHPWNVEHLKRYY
        GR L HPWN EHL+ YY
Subjt:  GRVLAHPWNVEHLKRYY

XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]6.9e-4677.12Show/hide
Query:  VAVGSHRVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRIQGHVSTLDPSWEGPFQVKGIVRPGTYMLADLE
        + + + R+EQY+P RNE ELLLNLDLLEGKRE AQLRLVE Q+RMARHYN+R++PRSFQVGHLV  +IQ HV TLDPSWE  F+VKGIVRPGTYMLADLE
Subjt:  VAVGSHRVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRIQGHVSTLDPSWEGPFQVKGIVRPGTYMLADLE

Query:  GRVLAHPWNVEHLKRYYP
          VLAHPWN EHLKRYYP
Subjt:  GRVLAHPWNVEHLKRYYP

TrEMBL top hitse value%identityAlignment
A0A2N9FYD5 Ribonuclease H6.3e-2951.22Show/hide
Query:  VAVGSHRVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRI-----QGHVSTLDPSWEGPFQVKGIVRPGTYM
        + + S R   YD  +NEE+L LNLDL++  RE A+ R+  YQ++MARHYNSRV+PR   +G LVLR++           L P+WEGP++V  + RPGTY 
Subjt:  VAVGSHRVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRI-----QGHVSTLDPSWEGPFQVKGIVRPGTYM

Query:  LADLEGRVLAHPWNVEHLKRYYP
        L D+ GR L+HPWN EHL+RYYP
Subjt:  LADLEGRVLAHPWNVEHLKRYYP

A0A2N9GTB8 Ribonuclease H3.7e-2951.22Show/hide
Query:  VAVGSHRVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRI-----QGHVSTLDPSWEGPFQVKGIVRPGTYM
        + + S R   YD  +NEE+L LNLDL++  RE A+ R+  YQ++MARHYNSRV+PR   +G LVLR++           L P+WEGP++V  + RPGTY 
Subjt:  VAVGSHRVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRI-----QGHVSTLDPSWEGPFQVKGIVRPGTYM

Query:  LADLEGRVLAHPWNVEHLKRYYP
        L D+ GR L+HPWN EHL+RYYP
Subjt:  LADLEGRVLAHPWNVEHLKRYYP

A0A6J1DP99 uncharacterized protein K02A2.6-like2.2e-3771.03Show/hide
Query:  VAVGSHRVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRIQGHVSTLDPSWEGPFQVKGIVRPGTYMLADLE
        + + + RVE Y+  RNEEELLL LDL++ KRE AQLRL EYQ++MARHYNSRVR RSFQ+G+LVLR++Q HV  L+PSWEGPF+VKGIVRPGTYMLADLE
Subjt:  VAVGSHRVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRIQGHVSTLDPSWEGPFQVKGIVRPGTYMLADLE

Query:  GRVLAHP
        G++L+HP
Subjt:  GRVLAHP

A0A6J1DWM2 Ribonuclease H8.8e-3155.56Show/hide
Query:  VAVGSHRVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRIQGHVSTLDPSWEGPFQVKGIVRPGTYMLADLE
        V + + RVE +D   N E LL+NLDLLE KR  +QLRL EYQ+RMAR+YN+RV+ R+F+   LVL+++  HV  L+P+WEGP++V  I+RP  Y+L+DL 
Subjt:  VAVGSHRVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRIQGHVSTLDPSWEGPFQVKGIVRPGTYMLADLE

Query:  GRVLAHPWNVEHLKRYY
        GR L HPWN EHL+ YY
Subjt:  GRVLAHPWNVEHLKRYY

A0A6J1DXL9 uncharacterized protein LOC1110254483.3e-4677.12Show/hide
Query:  VAVGSHRVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRIQGHVSTLDPSWEGPFQVKGIVRPGTYMLADLE
        + + + R+EQY+P RNE ELLLNLDLLEGKRE AQLRLVE Q+RMARHYN+R++PRSFQVGHLV  +IQ HV TLDPSWE  F+VKGIVRPGTYMLADLE
Subjt:  VAVGSHRVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRIQGHVSTLDPSWEGPFQVKGIVRPGTYMLADLE

Query:  GRVLAHPWNVEHLKRYYP
          VLAHPWN EHLKRYYP
Subjt:  GRVLAHPWNVEHLKRYYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTGCCACTGTTGCACGCCTAACACCTGCCGACCATGGAGGTTGTTATTTGCCGGATATCGGTTGGAGGCTGCCGAAAACATGAGGGGTGCTGCTGCTGTCACATT
GCCGAGACGTTGCGTCGCCGTGGGGTCCCACAGGGTAGAGCAGTACGACCCAACAAGAAACGAGGAAGAGCTACTCCTCAACCTTGATTTATTAGAAGGAAAAAGGGAAA
TGGCTCAGCTGCGCTTAGTAGAGTATCAGGACAGAATGGCCAGGCATTACAACTCCCGAGTCCGACCTCGAAGCTTTCAAGTTGGACACTTAGTCTTAAGGAGGATTCAA
GGCCACGTGAGCACTCTTGACCCGAGTTGGGAAGGACCGTTCCAGGTCAAGGGCATAGTCCGACCCGGAACATATATGCTGGCCGACTTGGAAGGAAGAGTGCTTGCGCA
TCCATGGAACGTGGAGCACTTGAAGCGCTATTACCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCTGCCACTGTTGCACGCCTAACACCTGCCGACCATGGAGGTTGTTATTTGCCGGATATCGGTTGGAGGCTGCCGAAAACATGAGGGGTGCTGCTGCTGTCACATT
GCCGAGACGTTGCGTCGCCGTGGGGTCCCACAGGGTAGAGCAGTACGACCCAACAAGAAACGAGGAAGAGCTACTCCTCAACCTTGATTTATTAGAAGGAAAAAGGGAAA
TGGCTCAGCTGCGCTTAGTAGAGTATCAGGACAGAATGGCCAGGCATTACAACTCCCGAGTCCGACCTCGAAGCTTTCAAGTTGGACACTTAGTCTTAAGGAGGATTCAA
GGCCACGTGAGCACTCTTGACCCGAGTTGGGAAGGACCGTTCCAGGTCAAGGGCATAGTCCGACCCGGAACATATATGCTGGCCGACTTGGAAGGAAGAGTGCTTGCGCA
TCCATGGAACGTGGAGCACTTGAAGCGCTATTACCCTTGA
Protein sequenceShow/hide protein sequence
MVCHCCTPNTCRPWRLLFAGYRLEAAENMRGAAAVTLPRRCVAVGSHRVEQYDPTRNEEELLLNLDLLEGKREMAQLRLVEYQDRMARHYNSRVRPRSFQVGHLVLRRIQ
GHVSTLDPSWEGPFQVKGIVRPGTYMLADLEGRVLAHPWNVEHLKRYYP