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Moc04g21940 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g21940
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA-directed RNA polymerase
Genome locationchr4:15962583..15964551
RNA-Seq ExpressionMoc04g21940
SyntenyMoc04g21940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2957421.1 phospholipase A-2-activating, partial [Olea europaea subsp. europaea]1.8e-0952.87Show/hide
Query:  PVNLPSLSLTMLSGTPHSFTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPA
        PVN  S SL ML G P  FT FL NS    SA      G KV YLEN ST T I  +   LGR +MKS    S G  GTGRGS+KPA
Subjt:  PVNLPSLSLTMLSGTPHSFTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPA

KAA0032464.1 uncharacterized protein E6C27_scaffold4060G00050 [Cucumis melo var. makuwa]1.1e-1150.53Show/hide
Query:  MLSGTPHSFTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRHVLVY
        ML  T H+FT  L NSC V  AE    VG K AY EN S ITR+   S T  R V+KS +T S GL   G+G +  A     TLSCWQMRHV  Y
Subjt:  MLSGTPHSFTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRHVLVY

KAA0054250.1 uncharacterized protein E6C27_scaffold131G002050 [Cucumis melo var. makuwa]2.5e-1159.15Show/hide
Query:  MLSGTPHSFTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGR
        ML GTPH+FT  L N+C V  AEH      KVAY EN S +T+IA+  P LGRWVMKS +TLSQG  GTG+
Subjt:  MLSGTPHSFTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGR

PKI59748.1 hypothetical protein CRG98_019851 [Punica granatum]1.2e-0543.68Show/hide
Query:  FTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRHVLVY
        FT     S    SAE    VG  +AYLENLST+T        LG   +KS +TL  G   TGRGS  PA      LSCW +R V  Y
Subjt:  FTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRHVLVY

PKU59084.1 hypothetical protein MA16_Dca027938 [Dendrobium catenatum]2.7e-0547.37Show/hide
Query:  MLSGTPHSFTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKP
        ML GTPHS T     S    S     G   KVAYL NL T T I       GR  MKS++TLS GL G G GS+ P
Subjt:  MLSGTPHSFTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKP

TrEMBL top hitse value%identityAlignment
A0A0P0XNB9 Os09g0415000 protein6.4e-0538.94Show/hide
Query:  LEPSSQKSSVHKVPVNLPSLSLTMLSGTPHSFTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPA
        L P + KS+V     N  S S TM  GTP   TM + N+ T +SA +      K AYLE LST   + +   T G+   KS         GTG GSS PA
Subjt:  LEPSSQKSSVHKVPVNLPSLSLTMLSGTPHSFTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPA

Query:  ILVLSTLSCWQMR
            S L  WQ R
Subjt:  ILVLSTLSCWQMR

A0A2I0JTX5 Uncharacterized protein5.8e-0643.68Show/hide
Query:  FTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRHVLVY
        FT     S    SAE    VG  +AYLENLST+T        LG   +KS +TL  G   TGRGS  PA      LSCW +R V  Y
Subjt:  FTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRHVLVY

A0A2I0V6Q3 Uncharacterized protein1.3e-0547.37Show/hide
Query:  MLSGTPHSFTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKP
        ML GTPHS T     S    S     G   KVAYL NL T T I       GR  MKS++TLS GL G G GS+ P
Subjt:  MLSGTPHSFTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKP

A0A5A7SMR7 Uncharacterized protein5.4e-1250.53Show/hide
Query:  MLSGTPHSFTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRHVLVY
        ML  T H+FT  L NSC V  AE    VG K AY EN S ITR+   S T  R V+KS +T S GL   G+G +  A     TLSCWQMRHV  Y
Subjt:  MLSGTPHSFTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRHVLVY

A0A5A7UG58 Uncharacterized protein1.2e-1159.15Show/hide
Query:  MLSGTPHSFTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGR
        ML GTPH+FT  L N+C V  AEH      KVAY EN S +T+IA+  P LGRWVMKS +TLSQG  GTG+
Subjt:  MLSGTPHSFTMFLNNSCTVISAEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTACCCACTTGTGCACTCCCCTCGTCAGCAGCCATGCGCGTGCCACGTGTCACAATCGCACTTTTCAAAGGACTCGCAAAGCAATCGTGCGGCACTTGCT
CTCGCCAACGAGCAAGTCAGCCAACGAGAATCGGGTAGCCGACGACACTACGACTATATATCACAACCTCCACCCCCATTGCGTGAACATGCAAAGTGGCGAGGA
GTCATTCGCCACCAAAAGTACAATGAAAAATCTTCTACGTGCTCCCAACTGATTTCTTCATTTGGAAGCCCTGTCCATTTGACTAAGAATTCTTGTGACCGCTGG
TCGGATCACTTCGTTATGTGTGCGATCAATGGTGTCCGGGTGATAGGATTTCAAGTTGCTCACATGAATCACTGGGTATGCTTGGGCAACATTCGTGGATTGTTG
CCATTCTTTGGTGAAGTTGTAAGCTTGGGGGCTATTTTCTTTGTAAGGATGGTCGATGATCTTGAGGATATGTTCATGTTGGAGCCAAGTAGCCAGAAGAGTTCC
GTCCATAAGGTTCCAGTGAATCTTCCATCTCTATCACTCACGATGCTCTCGGGGACACCCCATAGTTTCACTATGTTCTTGAATAATAGCTGCACTGTCATCTCT
GCTGAACACATCTTCGGAGTTGGGACAAAGGTTGCATATTTGGAGAATCTGTCGACAATAACAAGGATAGCTTTGGATTCTCCAACCTTGGGCAGGTGGGTGATG
AAGTCCAGGGATACGCTCTCCCAAGGCCTTGATGGCACTGGAAGGGGCTCCAGTAAGCCCGCAATTTTAGTCCTCTCGACTTTGTCTTGTTGGCAGATGAGACAC
GTCTTGGTGTATTACATAACGTTCGCAAGTTCGGCCAGTAGTACCCTTTCTTCAGTAGGGCATAAGTTCTCTGCCAGCCAGCGTGGCCATGCCACATGGTGTCAT
GACATTCTCTCATCGGGAGTTTCCTCAGGTTTCCTACTCGCAGAACATAGAGACGATTGCCTTTGGTGTGCCTTGATGGCTTCACGAACAGACCCCGTCAACTTG
CTTGCTTTTAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCTACCCACTTGTGCACTCCCCTCGTCAGCAGCCATGCGCGTGCCACGTGTCACAATCGCACTTTTCAAAGGACTCGCAAAGCAATCGTGCGGCACTTGCT
CTCGCCAACGAGCAAGTCAGCCAACGAGAATCGGGTAGCCGACGACACTACGACTATATATCACAACCTCCACCCCCATTGCGTGAACATGCAAAGTGGCGAGGA
GTCATTCGCCACCAAAAGTACAATGAAAAATCTTCTACGTGCTCCCAACTGATTTCTTCATTTGGAAGCCCTGTCCATTTGACTAAGAATTCTTGTGACCGCTGG
TCGGATCACTTCGTTATGTGTGCGATCAATGGTGTCCGGGTGATAGGATTTCAAGTTGCTCACATGAATCACTGGGTATGCTTGGGCAACATTCGTGGATTGTTG
CCATTCTTTGGTGAAGTTGTAAGCTTGGGGGCTATTTTCTTTGTAAGGATGGTCGATGATCTTGAGGATATGTTCATGTTGGAGCCAAGTAGCCAGAAGAGTTCC
GTCCATAAGGTTCCAGTGAATCTTCCATCTCTATCACTCACGATGCTCTCGGGGACACCCCATAGTTTCACTATGTTCTTGAATAATAGCTGCACTGTCATCTCT
GCTGAACACATCTTCGGAGTTGGGACAAAGGTTGCATATTTGGAGAATCTGTCGACAATAACAAGGATAGCTTTGGATTCTCCAACCTTGGGCAGGTGGGTGATG
AAGTCCAGGGATACGCTCTCCCAAGGCCTTGATGGCACTGGAAGGGGCTCCAGTAAGCCCGCAATTTTAGTCCTCTCGACTTTGTCTTGTTGGCAGATGAGACAC
GTCTTGGTGTATTACATAACGTTCGCAAGTTCGGCCAGTAGTACCCTTTCTTCAGTAGGGCATAAGTTCTCTGCCAGCCAGCGTGGCCATGCCACATGGTGTCAT
GACATTCTCTCATCGGGAGTTTCCTCAGGTTTCCTACTCGCAGAACATAGAGACGATTGCCTTTGGTGTGCCTTGATGGCTTCACGAACAGACCCCGTCAACTTG
CTTGCTTTTAGATGA
Protein sequenceShow/hide protein sequence
MPYPLVHSPRQQPCACHVSQSHFSKDSQSNRAALALANEQVSQRESGSRRHYDYISQPPPPLREHAKWRGVIRHQKYNEKSSTCSQLISSFGSPVHLTKNSCDRW
SDHFVMCAINGVRVIGFQVAHMNHWVCLGNIRGLLPFFGEVVSLGAIFFVRMVDDLEDMFMLEPSSQKSSVHKVPVNLPSLSLTMLSGTPHSFTMFLNNSCTVIS
AEHIFGVGTKVAYLENLSTITRIALDSPTLGRWVMKSRDTLSQGLDGTGRGSSKPAILVLSTLSCWQMRHVLVYYITFASSASSTLSSVGHKFSASQRGHATWCH
DILSSGVSSGFLLAEHRDDCLWCALMASRTDPVNLLAFR