CuGenDBv2

Gene ID	Moc04g21950
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase
Genome location	chr4:15966130..15967800
RNA-Seq Expression	Moc04g21950
Synteny	Moc04g21950
Gene Ontology terms	GO:0006807 - nitrogen compound metabolic process (biological process) GO:0043170 - macromolecule metabolic process (biological process) GO:0044238 - primary metabolic process (biological process) GO:0003824 - catalytic activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0032849.1 reverse transcriptase [Cucumis melo var. makuwa]

5.0e-112

44.03

Show/hide

Query:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV
        MS      +   +RLVE+EEQ+L+L EVPD +R+LE+RLEE+  K++ ID    R++   ++EL+ RVD LE+    G+  ++ERGDSST  VAH+EE V
Subjt:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV

Query:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------
        +ELDSSQK +++M++ +S+DFRA ++VVR E+A++N +++LTMRA+ NQ PAGG + +++VKIPEPKPF GARDAK LEN+IFD+EQ             
Subjt:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------

Query:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA
                         S+++DIQ+GRCTI+TWD LK+ LR+QFF EN                                    EKDK+F F+EGLKPWA
Subjt:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA

Query:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAH-
        K+KLY Q VQDL SAY  AE LFDL N+ SQD +R+  SSS G++  R SSPK+ GGD+    DRR YQ   G +W G N QN  NR PL CF+CKG H 
Subjt:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAH-

Query:  -----------------------------------------------------RTVGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--
                                                             + VGE   P+ERGLMYVD  ++ K  KSTMVDS ATHNF+TE EA  
Subjt:  -----------------------------------------------------RTVGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--

Query:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE
           RW                   + KR  +++G WSG VDFV+VKMDDFDVVLGME LLE
Subjt:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]

2.5e-111

43.85

Show/hide

Query:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV
        MS      +   +RLVE+EEQ+L+L EVPD +R+LE+RLEE+  K++ ID    R++   ++EL+ RVD LE+    G+  ++ERGDSST  VAH+EE V
Subjt:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV

Query:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------
        +ELDSSQK +++M++ +S+DFRA ++VVR E+A++N +++LTMRA+ NQ PAGG + +++VKIPEPKPF GARDAK LEN+IFD+EQ             
Subjt:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------

Query:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA
                         S+++DIQEGRCTI+TWD LK+ LR+QFF EN                                    EKDK+F F+EGLKPWA
Subjt:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA

Query:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAH-
        K+KLY Q VQDL SAY  AE LFDL N+ SQD +R+  SSS G++  R SSPK+ GGD+    DRR +Q   G +W G + QN  NR PL CF+CKG H 
Subjt:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAH-

Query:  -----------------------------------------------------RTVGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--
                                                             + VGE   P+ERGLMYVD  ++ K  KSTMVDS ATHNF+TE EA  
Subjt:  -----------------------------------------------------RTVGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--

Query:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE
           RW                   + KR  +++G WSG VDFV+VKMDDFDVVLGME LLE
Subjt:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE

KAA0037573.1 reverse transcriptase [Cucumis melo var. makuwa]

8.5e-112

44.21

Show/hide

Query:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV
        MS    L +   +RLVE+EEQ+L+L EVPD +R+LE+RLEE+  K++ ID    R++   ++EL+ RVD LE+    G+  ++ERGDSST  VAH+EE V
Subjt:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV

Query:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------
        +ELDSSQK  ++M++ +S+DFRA ++VVR E+A++N +++LTMRA+ NQ PAGG + +++VKIPEPKPF GARDAK LEN+IFD+EQ             
Subjt:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------

Query:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA
                         S+++DIQEGRCTI+TWD LK+ LR+QFF EN                                    EKDK+F F+EGLKPWA
Subjt:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA

Query:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAHR
        K+KLY Q VQDL SAY  AE LFDL N+ SQD +R+  SSS G++  R SSPK+ GGD+    DRR +Q   G +W G + QN  NR PL CF+CKG H 
Subjt:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAHR

Query:  T------------------------------------------------------VGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--
        T                                                      VGE   P+ERGLMYVD  ++ K  KSTMVDS ATHNF+TE EA  
Subjt:  T------------------------------------------------------VGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--

Query:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE
           RW                   + KR  +++G WSG VDFV+VKMDDFDVVLGME LLE
Subjt:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE

KAA0063412.1 reverse transcriptase [Cucumis melo var. makuwa]

2.5e-111

43.85

Show/hide

Query:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV
        MS      +   +RLVE+EEQ+L+L EVPD +R+LE+RLEE+  K++ ID    R++   ++EL+ RVD LE+    G+  ++ERGDSST  VAH+EE V
Subjt:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV

Query:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------
        +ELDSSQK +++M++ +S+DFRA ++VVR E+A++N +++LTMRA+ NQ PAGG + +++VKIPEPKPF GARDAK LEN+IFD+EQ             
Subjt:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------

Query:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA
                         S+++DIQEGRCTI+TWD LK+ LR+QFF EN                                    EKDK+F F+EGLKPWA
Subjt:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA

Query:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAH-
        K+KLY Q VQDL SAY  AE LFDL N+ SQD +R+  SSS G++  R SSPK+ GGD+    DRR +Q   G +W G + QN  NR PL CF+CKG H 
Subjt:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAH-

Query:  -----------------------------------------------------RTVGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--
                                                             + VGE   P+ERGLMYVD  ++ K  KSTMVDS ATHNF+TE EA  
Subjt:  -----------------------------------------------------RTVGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--

Query:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE
           RW                   + KR  +++G WSG VDFV+VKMDDFDVVLGME LLE
Subjt:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE

TYK03099.1 reverse transcriptase [Cucumis melo var. makuwa]

5.0e-112

44.03

Show/hide

Query:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV
        MS    L +   +RLVE+EEQ+L+L EVPD +R+LE+RLEE+  K++ ID    R++   ++EL+ RVD LE+    G+  ++ERGDSST  VAH+EE V
Subjt:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV

Query:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------
        +ELDSSQK +++M++ +S+DFRA ++VVR E+A++N +++LTMRA+ NQ PAGG + +++VKIPEPKPF GARDAK LEN+IFD+EQ             
Subjt:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------

Query:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA
                         S+++DIQEGRCTI+TWD LK+ LR+QFF EN                                    EKDK+F F+EGLKPWA
Subjt:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA

Query:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAH-
        K+KLY Q VQDL SAY  AE LFDL N+ SQD +R+  SSS G++  R SSPK+ GGD+    DRR +Q   G +W G + QN  NR PL CF+CKG H 
Subjt:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAH-

Query:  -----------------------------------------------------RTVGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--
                                                             + VGE   P+ERGLMYVD  ++ K  KSTMVDS ATHNF+TE EA  
Subjt:  -----------------------------------------------------RTVGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--

Query:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE
           RW                   + KR  +++G WSG VDFV+VKMDDFDVVLGME LLE
Subjt:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SUK4 Reverse transcriptase

2.4e-112

44.03

Show/hide

Query:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV
        MS      +   +RLVE+EEQ+L+L EVPD +R+LE+RLEE+  K++ ID    R++   ++EL+ RVD LE+    G+  ++ERGDSST  VAH+EE V
Subjt:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV

Query:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------
        +ELDSSQK +++M++ +S+DFRA ++VVR E+A++N +++LTMRA+ NQ PAGG + +++VKIPEPKPF GARDAK LEN+IFD+EQ             
Subjt:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------

Query:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA
                         S+++DIQ+GRCTI+TWD LK+ LR+QFF EN                                    EKDK+F F+EGLKPWA
Subjt:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA

Query:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAH-
        K+KLY Q VQDL SAY  AE LFDL N+ SQD +R+  SSS G++  R SSPK+ GGD+    DRR YQ   G +W G N QN  NR PL CF+CKG H 
Subjt:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAH-

Query:  -----------------------------------------------------RTVGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--
                                                             + VGE   P+ERGLMYVD  ++ K  KSTMVDS ATHNF+TE EA  
Subjt:  -----------------------------------------------------RTVGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--

Query:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE
           RW                   + KR  +++G WSG VDFV+VKMDDFDVVLGME LLE
Subjt:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE

A0A5A7T3M3 Reverse transcriptase

4.1e-112

44.21

Show/hide

Query:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV
        MS    L +   +RLVE+EEQ+L+L EVPD +R+LE+RLEE+  K++ ID    R++   ++EL+ RVD LE+    G+  ++ERGDSST  VAH+EE V
Subjt:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV

Query:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------
        +ELDSSQK  ++M++ +S+DFRA ++VVR E+A++N +++LTMRA+ NQ PAGG + +++VKIPEPKPF GARDAK LEN+IFD+EQ             
Subjt:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------

Query:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA
                         S+++DIQEGRCTI+TWD LK+ LR+QFF EN                                    EKDK+F F+EGLKPWA
Subjt:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA

Query:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAHR
        K+KLY Q VQDL SAY  AE LFDL N+ SQD +R+  SSS G++  R SSPK+ GGD+    DRR +Q   G +W G + QN  NR PL CF+CKG H 
Subjt:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAHR

Query:  T------------------------------------------------------VGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--
        T                                                      VGE   P+ERGLMYVD  ++ K  KSTMVDS ATHNF+TE EA  
Subjt:  T------------------------------------------------------VGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--

Query:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE
           RW                   + KR  +++G WSG VDFV+VKMDDFDVVLGME LLE
Subjt:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE

A0A5D3BRZ6 Reverse transcriptase

1.2e-111

43.85

Show/hide

Query:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV
        MS      +   +RLVE+EEQ+L+L EVPD +R+LE+RLEE+  K++ ID    R++   ++EL+ RVD LE+    G+  ++ERGDSST  VAH+EE V
Subjt:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV

Query:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------
        +ELDSSQK +++M++ +S+DFRA ++VVR E+A++N +++LTMRA+ NQ PAGG + +++VKIPEPKPF GARDAK LEN+IFD+EQ             
Subjt:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------

Query:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA
                         S+++DIQEGRCTI+TWD LK+ LR+QFF EN                                    EKDK+F F+EGLKPWA
Subjt:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA

Query:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAH-
        K+KLY Q VQDL SAY  AE LFDL N+ SQD +R+  SSS G++  R SSPK+ GGD+    DRR +Q   G +W G + QN  NR PL CF+CKG H 
Subjt:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAH-

Query:  -----------------------------------------------------RTVGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--
                                                             + VGE   P+ERGLMYVD  ++ K  KSTMVDS ATHNF+TE EA  
Subjt:  -----------------------------------------------------RTVGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--

Query:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE
           RW                   + KR  +++G WSG VDFV+VKMDDFDVVLGME LLE
Subjt:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE

A0A5D3BYE6 Reverse transcriptase

2.4e-112

44.03

Show/hide

Query:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV
        MS    L +   +RLVE+EEQ+L+L EVPD +R+LE+RLEE+  K++ ID    R++   ++EL+ RVD LE+    G+  ++ERGDSST  VAH+EE V
Subjt:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV

Query:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------
        +ELDSSQK +++M++ +S+DFRA ++VVR E+A++N +++LTMRA+ NQ PAGG + +++VKIPEPKPF GARDAK LEN+IFD+EQ             
Subjt:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------

Query:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA
                         S+++DIQEGRCTI+TWD LK+ LR+QFF EN                                    EKDK+F F+EGLKPWA
Subjt:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA

Query:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAH-
        K+KLY Q VQDL SAY  AE LFDL N+ SQD +R+  SSS G++  R SSPK+ GGD+    DRR +Q   G +W G + QN  NR PL CF+CKG H 
Subjt:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAH-

Query:  -----------------------------------------------------RTVGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--
                                                             + VGE   P+ERGLMYVD  ++ K  KSTMVDS ATHNF+TE EA  
Subjt:  -----------------------------------------------------RTVGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--

Query:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE
           RW                   + KR  +++G WSG VDFV+VKMDDFDVVLGME LLE
Subjt:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE

A0A5D3C4R1 Reverse transcriptase

1.2e-111

43.85

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Query:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV
        MS      +   +RLVE+EEQ+L+L EVPD +R+LE+RLEE+  K++ ID    R++   ++EL+ RVD LE+    G+  ++ERGDSST  VAH+EE V
Subjt:  MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLES--KAGKIASFERGDSSTSFVAHVEEHV

Query:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------
        +ELDSSQK +++M++ +S+DFRA ++VVR E+A++N +++LTMRA+ NQ PAGG + +++VKIPEPKPF GARDAK LEN+IFD+EQ             
Subjt:  EELDSSQKVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQ-------------

Query:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA
                         S+++DIQEGRCTI+TWD LK+ LR+QFF EN                                    EKDK+F F+EGLKPWA
Subjt:  -----------------SKYMDIQEGRCTINTWDELKKALRAQFFSEN------------------------------------EKDKIFYFIEGLKPWA

Query:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAH-
        K+KLY Q VQDL SAY  AE LFDL N+ SQD +R+  SSS G++  R SSPK+ GGD+    DRR +Q   G +W G + QN  NR PL CF+CKG H 
Subjt:  KSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRG-GTNWHGPNQQNNFNRGPLVCFLCKGAH-

Query:  -----------------------------------------------------RTVGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--
                                                             + VGE   P+ERGLMYVD  ++ K  KSTMVDS ATHNF+TE EA  
Subjt:  -----------------------------------------------------RTVGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEA--

Query:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE
           RW                   + KR  +++G WSG VDFV+VKMDDFDVVLGME LLE
Subjt:  ---RW-------------------IAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTCGGTAGTGAAACAGTTGAACGAGACACATGTCGAACGACTCGTGGAAATTGAGGAACAGCTGTTGTTCCTGAGGGAAGTCCCTGATCATGTTCGGTTCCTA
GAAAATCGGCTAGAAGAGTTGCCTAGTAAATCCGATGGAATCGACACGGCAAATGCTCGAATTGACACATTGCTAGTGAAAGAGTTGTTGGTTAGGGTTGACACC
CTAGAAAGTAAAGCCGGAAAAATAGCTAGTTTCGAGCGAGGGGACAGCTCGACGAGCTTTGTTGCTCATGTAGAGGAGCATGTCGAAGAGTTAGACAGCTCCCAG
AAGGTGATCATGCAGATGGTCAGTGATCTTTCCGACGACTTTCGAGCTGCTATAGAAGTCGTGCGGGCAGAAGTTGCCGAGATAAACACGAAGGTGAACCTCACC
ATGAGAGCGGTGGGGAACCAAGGCCCAGCAGGGGGCAATGTCCAGTTGAACAAGGTGAAGATTCCGGAGCCTAAGCCCTTCAGTGGGGCTCGCGATGCCAAGACC
CTCGAGAACTTCATCTTTGACGTCGAACAGTCCAAGTATATGGACATCCAAGAGGGACGATGCACTATAAACACATGGGATGAGTTGAAGAAAGCTCTCAGGGCG
CAGTTTTTTTCAGAAAATGAGAAAGACAAAATCTTCTACTTCATAGAAGGCTTGAAACCATGGGCCAAGTCTAAGTTGTACTATCAAGGGGTTCAAGACCTCGGC
TCTGCTTATGTTGTGGCTGAACACCTGTTTGATCTTGGTAACGAGCAGTCTCAAGATTACAAAAGGAACCAACCCTCCTCAAGTAGTGGGAACAAAACCACCAGA
ACAAGCTCACCCAAAAGTGGGGGAGGAGACAAGAATGGAGGAGTAGATCGCAGACCCTATCAGAGGGGTGGAACCAACTGGCACGGGCCAAACCAACAGAACAAC
TTCAATCGAGGACCCCTTGTTTGCTTTCTGTGTAAAGGCGCTCATCGCACAGTAGGAGAAGCAAAAGAACCACTAGAGAGAGGGCTCATGTATGTAGACGTGTTG
GTTCACGGTAAAGCTGCCAAGAGTACTATGGTGGATTCTGAAGCCACACACAATTTCATGACCGAAACCGAGGCTCGCTGGATAGCAAAAAGGGACAAACTGAAG
ATCGGGACATGGAGCGGCAAAGTAGACTTTGTAATTGTTAAAATGGATGACTTCGACGTCGTGCTCGGAATGGAATTGCTTCTAGAGTAA

mRNA sequence

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Protein sequence

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MSVVKQLNETHVERLVEIEEQLLFLREVPDHVRFLENRLEELPSKSDGIDTANARIDTLLVKELLVRVDTLESKAGKIASFERGDSSTSFVAHVEEHVEELDSSQ
KVIMQMVSDLSDDFRAAIEVVRAEVAEINTKVNLTMRAVGNQGPAGGNVQLNKVKIPEPKPFSGARDAKTLENFIFDVEQSKYMDIQEGRCTINTWDELKKALRA
QFFSENEKDKIFYFIEGLKPWAKSKLYYQGVQDLGSAYVVAEHLFDLGNEQSQDYKRNQPSSSSGNKTTRTSSPKSGGGDKNGGVDRRPYQRGGTNWHGPNQQNN
FNRGPLVCFLCKGAHRTVGEAKEPLERGLMYVDVLVHGKAAKSTMVDSEATHNFMTETEARWIAKRDKLKIGTWSGKVDFVIVKMDDFDVVLGMELLLE

Moc04g21950 (gene) of Bitter gourd (OHB3-1) v2 genome