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Moc04g22140 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g22140
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr4:16095376..16096182
RNA-Seq ExpressionMoc04g22140
SyntenyMoc04g22140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]2.9e-4370.83Show/hide
Query:  EMEAMRTEMRSMEEMGPHLGPVEEEHPEDNESEGHTRQRGDLCEHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQV
        E    R +M   E+ G HLGPV++ HPE  E E +T QRGDL EHLNRKR SSLRKGQSPS SHR+SNQQAESS NP TP GVITREEFDQL+ + DAQV
Subjt:  EMEAMRTEMRSMEEMGPHLGPVEEEHPEDNESEGHTRQRGDLCEHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQV

Query:  EALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP
        EALKAKCE+KE   +DGDLGESPFTSD+LEA IP KFK PT+KP
Subjt:  EALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP

XP_022152033.1 uncharacterized protein LOC111019842 [Momordica charantia]1.1e-3994.79Show/hide
Query:  KRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP
        +RGSSLRKGQSPSRSHRSSNQQAESS NPATPAGVITREEFDQLRG+LDAQVEALKAKCEQKEG LNDGDLGESPFTSDVLEAPIP KFKAPTVKP
Subjt:  KRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP

XP_022155128.1 uncharacterized protein LOC111022267 [Momordica charantia]2.0e-3674.14Show/hide
Query:  DNESEGHTRQRGDLCEHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDV
        + E E +T QRGDL EHLNRKR SSLRKGQSPS SHR+SNQQAESS NP TP  VITREEFDQL+ + DAQVEALKA CE+KE   +DGDLGE PFT D+
Subjt:  DNESEGHTRQRGDLCEHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDV

Query:  LEAPIPPKFKAPTVKP
        LEAPI PKFK PT+KP
Subjt:  LEAPIPPKFKAPTVKP

XP_022158652.1 uncharacterized protein LOC111025109 [Momordica charantia]9.8e-3687.76Show/hide
Query:  NRKRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP
        + KRGSSLRKGQSPSRSHRSSNQQAESS N   PAG+ITREEFDQLRG+LDAQVEALKAKCEQK+  LNDGDLGE PFTSDVLEAPIPPKFKAPTVKP
Subjt:  NRKRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]3.7e-6763.6Show/hide
Query:  MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAPVLPPAHPPRTSKATRGRDGTSKKGARGPAPAPTSENLDALQREMEAM
        MVQP +STNT DRR L A+D HQREVGA VVEGQ H+GL TEP  RSARIT P L PAH P+  KA RGR G S++   G APAP+ EN DALQ+EMEAM
Subjt:  MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAPVLPPAHPPRTSKATRGRDGTSKKGARGPAPAPTSENLDALQREMEAM

Query:  RTEMRSMEEMGPHLGPVEEEHPEDNESEGHTRQRGDLCEHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQVEALKA
        RT+M +MEEM   +          +E      +RGDL +HL+RKR SSLRKG+SPS SH++SNQQAESS NP  P GVITREEFDQL+ + DAQVE LKA
Subjt:  RTEMRSMEEMGPHLGPVEEEHPEDNESEGHTRQRGDLCEHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQVEALKA

Query:  KCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP
        +CE K    +DGDLGESPFTSD+LEA IP KFK PT+KP
Subjt:  KCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP

TrEMBL top hitse value%identityAlignment
A0A6J1DDS5 uncharacterized protein LOC1110198425.4e-4094.79Show/hide
Query:  KRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP
        +RGSSLRKGQSPSRSHRSSNQQAESS NPATPAGVITREEFDQLRG+LDAQVEALKAKCEQKEG LNDGDLGESPFTSDVLEAPIP KFKAPTVKP
Subjt:  KRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP

A0A6J1DDW5 uncharacterized protein LOC1110196341.4e-4370.83Show/hide
Query:  EMEAMRTEMRSMEEMGPHLGPVEEEHPEDNESEGHTRQRGDLCEHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQV
        E    R +M   E+ G HLGPV++ HPE  E E +T QRGDL EHLNRKR SSLRKGQSPS SHR+SNQQAESS NP TP GVITREEFDQL+ + DAQV
Subjt:  EMEAMRTEMRSMEEMGPHLGPVEEEHPEDNESEGHTRQRGDLCEHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQV

Query:  EALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP
        EALKAKCE+KE   +DGDLGESPFTSD+LEA IP KFK PT+KP
Subjt:  EALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP

A0A6J1DM55 uncharacterized protein LOC1110222679.6e-3774.14Show/hide
Query:  DNESEGHTRQRGDLCEHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDV
        + E E +T QRGDL EHLNRKR SSLRKGQSPS SHR+SNQQAESS NP TP  VITREEFDQL+ + DAQVEALKA CE+KE   +DGDLGE PFT D+
Subjt:  DNESEGHTRQRGDLCEHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDV

Query:  LEAPIPPKFKAPTVKP
        LEAPI PKFK PT+KP
Subjt:  LEAPIPPKFKAPTVKP

A0A6J1DXR9 uncharacterized protein LOC1110251094.8e-3687.76Show/hide
Query:  NRKRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP
        + KRGSSLRKGQSPSRSHRSSNQQAESS N   PAG+ITREEFDQLRG+LDAQVEALKAKCEQK+  LNDGDLGE PFTSDVLEAPIPPKFKAPTVKP
Subjt:  NRKRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP

A0A6J1DZJ1 uncharacterized protein LOC1110257381.8e-6763.6Show/hide
Query:  MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAPVLPPAHPPRTSKATRGRDGTSKKGARGPAPAPTSENLDALQREMEAM
        MVQP +STNT DRR L A+D HQREVGA VVEGQ H+GL TEP  RSARIT P L PAH P+  KA RGR G S++   G APAP+ EN DALQ+EMEAM
Subjt:  MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAPVLPPAHPPRTSKATRGRDGTSKKGARGPAPAPTSENLDALQREMEAM

Query:  RTEMRSMEEMGPHLGPVEEEHPEDNESEGHTRQRGDLCEHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQVEALKA
        RT+M +MEEM   +          +E      +RGDL +HL+RKR SSLRKG+SPS SH++SNQQAESS NP  P GVITREEFDQL+ + DAQVE LKA
Subjt:  RTEMRSMEEMGPHLGPVEEEHPEDNESEGHTRQRGDLCEHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQVEALKA

Query:  KCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP
        +CE K    +DGDLGESPFTSD+LEA IP KFK PT+KP
Subjt:  KCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAACCCGCAAACTCGACCAATACGGCAGATCGAAGGACCCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCAGTGGTAGAGGGGCAAGGT
CACGACGGCCTAGCAACAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGTTCTACCACCTGCGCACCCCCCAAGGACATCCAAGGCCACCCGTGGCCGA
GATGGAACCTCTAAGAAGGGCGCCCGGGGTCCAGCCCCGGCCCCGACAAGTGAGAACTTGGACGCACTCCAGAGAGAAATGGAGGCAATGCGCACGGAAATGCGG
TCCATGGAGGAAATGGGTCCCCACCTCGGCCCAGTCGAGGAGGAACATCCCGAAGACAACGAGAGCGAGGGACACACTCGCCAGAGAGGAGACCTCTGTGAACAC
CTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCTCACACAGGAGCTCTAACCAGCAGGCTGAATCCTCTCGCAACCCAGCAACTCCT
GCAGGAGTGATTACAAGGGAGGAGTTCGACCAGCTGAGGGGCCAGCTCGACGCTCAGGTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTCCACTGAAC
GATGGCGACTTGGGAGAATCGCCCTTCACCTCGGACGTTTTGGAAGCACCGATCCCTCCGAAGTTCAAAGCTCCTACCGTGAAGCCCTCACGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAACCCGCAAACTCGACCAATACGGCAGATCGAAGGACCCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCAGTGGTAGAGGGGCAAGGT
CACGACGGCCTAGCAACAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGTTCTACCACCTGCGCACCCCCCAAGGACATCCAAGGCCACCCGTGGCCGA
GATGGAACCTCTAAGAAGGGCGCCCGGGGTCCAGCCCCGGCCCCGACAAGTGAGAACTTGGACGCACTCCAGAGAGAAATGGAGGCAATGCGCACGGAAATGCGG
TCCATGGAGGAAATGGGTCCCCACCTCGGCCCAGTCGAGGAGGAACATCCCGAAGACAACGAGAGCGAGGGACACACTCGCCAGAGAGGAGACCTCTGTGAACAC
CTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCTCACACAGGAGCTCTAACCAGCAGGCTGAATCCTCTCGCAACCCAGCAACTCCT
GCAGGAGTGATTACAAGGGAGGAGTTCGACCAGCTGAGGGGCCAGCTCGACGCTCAGGTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTCCACTGAAC
GATGGCGACTTGGGAGAATCGCCCTTCACCTCGGACGTTTTGGAAGCACCGATCCCTCCGAAGTTCAAAGCTCCTACCGTGAAGCCCTCACGGTAG
Protein sequenceShow/hide protein sequence
MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAPVLPPAHPPRTSKATRGRDGTSKKGARGPAPAPTSENLDALQREMEAMRTEMR
SMEEMGPHLGPVEEEHPEDNESEGHTRQRGDLCEHLNRKRGSSLRKGQSPSRSHRSSNQQAESSRNPATPAGVITREEFDQLRGQLDAQVEALKAKCEQKEGPLN
DGDLGESPFTSDVLEAPIPPKFKAPTVKPSR