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Moc04g22250 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g22250
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr4:16138128..16138637
RNA-Seq ExpressionMoc04g22250
SyntenyMoc04g22250
Gene Ontology termsGO:0034641 - cellular nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8690376.1 pentatricopeptide repeat-containing protein [Hibiscus syriacus]6.3e-2139.2Show/hide
Query:  MCDHCKRTNHTKDRCWDLHGRPQRKNLSGDYRPPPPTNTPPSRTSSSDYQVGPSVSNSQDLATSFPPFSKAQLEQLYRLL-------TPPVESTPSLSFV
        +C+HC +  HTK +CW LHG+P  +N S +           SR +   Y      S     AT    FSK QLEQLY+L+       TP   S  + S +
Subjt:  MCDHCKRTNHTKDRCWDLHGRPQRKNLSGDYRPPPPTNTPPSRTSSSDYQVGPSVSNSQDLATSFPPFSKAQLEQLYRLL-------TPPVESTPSLSFV

Query:  AQRGIFSAALTSQQHSDQWILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSVILSPNVTLHSVL
        AQ+G +  A  +   S+ WI+DS ATDHMT    +F+ Y P      VK+ADGS   I G GS+I+SP++TL +VL
Subjt:  AQRGIFSAALTSQQHSDQWILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSVILSPNVTLHSVL

RVW35006.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]6.3e-2140Show/hide
Query:  CDHCKRTNHTKDRCWDLHGRPQRKNLSGDYRPPPPTNTPPSRTSSSDYQVGPSVSNSQDLATSFPPFSKAQLEQLYRLLTPPVESTPSLSFVAQRGIFSA
        CDHCK+  HTK+ CW +HG+PQ      +++    ++    +T S+D Q GP +++ +      P F+K QL  LY+L   P  S PS S   Q     A
Subjt:  CDHCKRTNHTKDRCWDLHGRPQRKNLSGDYRPPPPTNTPPSRTSSSDYQVGPSVSNSQDLATSFPPFSKAQLEQLYRLLTPPVESTPSLSFVAQRGIFSA

Query:  ALTSQQHSDQ--WILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSVILSPNVTLHSVL
        AL+S + +    WI+DS ATDHMT    +F+ Y P      +K+ADGS + I G GSV +SP++TLH+VL
Subjt:  ALTSQQHSDQ--WILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSVILSPNVTLHSVL

RVW98618.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]6.3e-2140Show/hide
Query:  CDHCKRTNHTKDRCWDLHGRPQRKNLSGDYRPPPPTNTPPSRTSSSDYQVGPSVSNSQDLATSFPPFSKAQLEQLYRLLTPPVESTPSLSFVAQRGIFSA
        CDHCK+  HTK+ CW +HG+PQ      +++    ++    +T S+D Q GP +++ +      P F+K QL  LY+L   P  S PS S   Q     A
Subjt:  CDHCKRTNHTKDRCWDLHGRPQRKNLSGDYRPPPPTNTPPSRTSSSDYQVGPSVSNSQDLATSFPPFSKAQLEQLYRLLTPPVESTPSLSFVAQRGIFSA

Query:  ALTSQQHSDQ--WILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSVILSPNVTLHSVL
        AL+S + +    WI+DS ATDHMT    +F+ Y P      +K+ADGS + I G GSV +SP++TLH+VL
Subjt:  ALTSQQHSDQ--WILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSVILSPNVTLHSVL

XP_004486931.2 uncharacterized protein LOC101513206 [Cicer arietinum]4.8e-2143.79Show/hide
Query:  CDHCKRTNHTKDRCWDLHGRPQRKNLSGDYRPPPPTNTPPSRTSSSDYQVGPSVSNSQDLATSFPPFSKAQLEQLYRLLTPPVESTPSLSFVAQRGIF-S
        C+HCKR  HT+D CW LHG+P                    R      Q G S    Q  ++S  PF+K QL+QLY+LL    ES  S   +AQRG F +
Subjt:  CDHCKRTNHTKDRCWDLHGRPQRKNLSGDYRPPPPTNTPPSRTSSSDYQVGPSVSNSQDLATSFPPFSKAQLEQLYRLLTPPVESTPSLSFVAQRGIF-S

Query:  AALTSQQHSDQWILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSVILSPNVTLHSVL
         AL S   S  WI+DS ATDHMT    +F+ YSP      +K+ADGS + I G GSVILSP +TL  VL
Subjt:  AALTSQQHSDQWILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSVILSPNVTLHSVL

XP_022159153.1 uncharacterized protein LOC111025577 [Momordica charantia]1.5e-4386.96Show/hide
Query:  SQDLATSFPPFSK---AQLEQLYRLLTPPVESTPSLSFVAQRGIFSAALTSQQHSDQWILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGF
        S  LA   PP SK   AQLEQLYRLLT PVESTPS SFVAQRGI SAALT QQHSDQWILDS ATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGF
Subjt:  SQDLATSFPPFSK---AQLEQLYRLLTPPVESTPSLSFVAQRGIFSAALTSQQHSDQWILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGF

Query:  GSVILSPNVTLHSVL
        GSVILSPN+TLHSVL
Subjt:  GSVILSPNVTLHSVL

TrEMBL top hitse value%identityAlignment
A0A1S2XBU5 uncharacterized protein LOC1015132062.3e-2143.79Show/hide
Query:  CDHCKRTNHTKDRCWDLHGRPQRKNLSGDYRPPPPTNTPPSRTSSSDYQVGPSVSNSQDLATSFPPFSKAQLEQLYRLLTPPVESTPSLSFVAQRGIF-S
        C+HCKR  HT+D CW LHG+P                    R      Q G S    Q  ++S  PF+K QL+QLY+LL    ES  S   +AQRG F +
Subjt:  CDHCKRTNHTKDRCWDLHGRPQRKNLSGDYRPPPPTNTPPSRTSSSDYQVGPSVSNSQDLATSFPPFSKAQLEQLYRLLTPPVESTPSLSFVAQRGIF-S

Query:  AALTSQQHSDQWILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSVILSPNVTLHSVL
         AL S   S  WI+DS ATDHMT    +F+ YSP      +K+ADGS + I G GSVILSP +TL  VL
Subjt:  AALTSQQHSDQWILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSVILSPNVTLHSVL

A0A438DI24 Retrovirus-related Pol polyprotein from transposon RE13.0e-2140Show/hide
Query:  CDHCKRTNHTKDRCWDLHGRPQRKNLSGDYRPPPPTNTPPSRTSSSDYQVGPSVSNSQDLATSFPPFSKAQLEQLYRLLTPPVESTPSLSFVAQRGIFSA
        CDHCK+  HTK+ CW +HG+PQ      +++    ++    +T S+D Q GP +++ +      P F+K QL  LY+L   P  S PS S   Q     A
Subjt:  CDHCKRTNHTKDRCWDLHGRPQRKNLSGDYRPPPPTNTPPSRTSSSDYQVGPSVSNSQDLATSFPPFSKAQLEQLYRLLTPPVESTPSLSFVAQRGIFSA

Query:  ALTSQQHSDQ--WILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSVILSPNVTLHSVL
        AL+S + +    WI+DS ATDHMT    +F+ Y P      +K+ADGS + I G GSV +SP++TLH+VL
Subjt:  ALTSQQHSDQ--WILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSVILSPNVTLHSVL

A0A438IPH4 Retrovirus-related Pol polyprotein from transposon RE13.0e-2140Show/hide
Query:  CDHCKRTNHTKDRCWDLHGRPQRKNLSGDYRPPPPTNTPPSRTSSSDYQVGPSVSNSQDLATSFPPFSKAQLEQLYRLLTPPVESTPSLSFVAQRGIFSA
        CDHCK+  HTK+ CW +HG+PQ      +++    ++    +T S+D Q GP +++ +      P F+K QL  LY+L   P  S PS S   Q     A
Subjt:  CDHCKRTNHTKDRCWDLHGRPQRKNLSGDYRPPPPTNTPPSRTSSSDYQVGPSVSNSQDLATSFPPFSKAQLEQLYRLLTPPVESTPSLSFVAQRGIFSA

Query:  ALTSQQHSDQ--WILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSVILSPNVTLHSVL
        AL+S + +    WI+DS ATDHMT    +F+ Y P      +K+ADGS + I G GSV +SP++TLH+VL
Subjt:  ALTSQQHSDQ--WILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSVILSPNVTLHSVL

A0A6A2ZFN0 Gag-Pol-p1993.0e-2139.2Show/hide
Query:  MCDHCKRTNHTKDRCWDLHGRPQRKNLSGDYRPPPPTNTPPSRTSSSDYQVGPSVSNSQDLATSFPPFSKAQLEQLYRLL-------TPPVESTPSLSFV
        +C+HC +  HTK +CW LHG+P  +N S +           SR +   Y      S     AT    FSK QLEQLY+L+       TP   S  + S +
Subjt:  MCDHCKRTNHTKDRCWDLHGRPQRKNLSGDYRPPPPTNTPPSRTSSSDYQVGPSVSNSQDLATSFPPFSKAQLEQLYRLL-------TPPVESTPSLSFV

Query:  AQRGIFSAALTSQQHSDQWILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSVILSPNVTLHSVL
        AQ+G +  A  +   S+ WI+DS ATDHMT    +F+ Y P      VK+ADGS   I G GS+I+SP++TL +VL
Subjt:  AQRGIFSAALTSQQHSDQWILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSVILSPNVTLHSVL

A0A6J1DY12 uncharacterized protein LOC1110255777.4e-4486.96Show/hide
Query:  SQDLATSFPPFSK---AQLEQLYRLLTPPVESTPSLSFVAQRGIFSAALTSQQHSDQWILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGF
        S  LA   PP SK   AQLEQLYRLLT PVESTPS SFVAQRGI SAALT QQHSDQWILDS ATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGF
Subjt:  SQDLATSFPPFSK---AQLEQLYRLLTPPVESTPSLSFVAQRGIFSAALTSQQHSDQWILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGF

Query:  GSVILSPNVTLHSVL
        GSVILSPN+TLHSVL
Subjt:  GSVILSPNVTLHSVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGATCATTGTAAGCGCACAAACCATACAAAAGATCGGTGTTGGGACCTCCATGGTCGTCCTCAACGGAAGAATTTATCAGGGGATTATCGGCCACCTCCA
CCTACAAATACTCCACCTTCTCGAACTAGCTCCTCCGACTATCAAGTGGGCCCTAGTGTGTCAAACTCCCAAGATTTGGCCACCTCTTTCCCTCCATTTTCGAAG
GCACAACTTGAACAGCTCTATCGCCTCTTAACACCGCCGGTTGAGTCTACTCCTTCGTTAAGTTTTGTGGCACAACGAGGTATTTTTAGTGCAGCTTTAACAAGT
CAGCAGCATTCCGATCAGTGGATCTTAGACTCGAGTGCAACTGATCATATGACCGCTTTTCATGATATGTTTACCATGTACTCACCCAACCCGATTCAGACACAT
GTCAAGCTTGCAGATGGGTCATCGGCCATTATTAAGGGCTTTGGTTCTGTTATTCTTAGCCCAAACGTTACATTGCACTCAGTGCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGATCATTGTAAGCGCACAAACCATACAAAAGATCGGTGTTGGGACCTCCATGGTCGTCCTCAACGGAAGAATTTATCAGGGGATTATCGGCCACCTCCA
CCTACAAATACTCCACCTTCTCGAACTAGCTCCTCCGACTATCAAGTGGGCCCTAGTGTGTCAAACTCCCAAGATTTGGCCACCTCTTTCCCTCCATTTTCGAAG
GCACAACTTGAACAGCTCTATCGCCTCTTAACACCGCCGGTTGAGTCTACTCCTTCGTTAAGTTTTGTGGCACAACGAGGTATTTTTAGTGCAGCTTTAACAAGT
CAGCAGCATTCCGATCAGTGGATCTTAGACTCGAGTGCAACTGATCATATGACCGCTTTTCATGATATGTTTACCATGTACTCACCCAACCCGATTCAGACACAT
GTCAAGCTTGCAGATGGGTCATCGGCCATTATTAAGGGCTTTGGTTCTGTTATTCTTAGCCCAAACGTTACATTGCACTCAGTGCTCTGA
Protein sequenceShow/hide protein sequence
MCDHCKRTNHTKDRCWDLHGRPQRKNLSGDYRPPPPTNTPPSRTSSSDYQVGPSVSNSQDLATSFPPFSKAQLEQLYRLLTPPVESTPSLSFVAQRGIFSAALTS
QQHSDQWILDSSATDHMTAFHDMFTMYSPNPIQTHVKLADGSSAIIKGFGSVILSPNVTLHSVL