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Moc04g22280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g22280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr4:16152877..16162128
RNA-Seq ExpressionMoc04g22280
SyntenyMoc04g22280
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026069.1 gag/pol protein [Cucumis melo var. makuwa]7.6e-2464.96Show/hide
Query:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY
        MNK+ YTLTT LNELQT++SLMK KGQ+GEANVATS R FHRGS+S TKS PS S +K +KKKK  G+  K + A A T K K K A KG  F CN +G+
Subjt:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY

Query:  WKRNCLKYLAEKKKANE
        WKRNC KYLAEKKKA +
Subjt:  WKRNCLKYLAEKKKANE

KAA0026233.1 gag/pol protein [Cucumis melo var. makuwa]5.8e-2464.1Show/hide
Query:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY
        MNK+ YTLTT LNELQT++SLMK KGQ+GEANVATS R FHRGS+S TKS PS S +K +KKKK  G+  K + A A T K K K A KG  F+CN +G+
Subjt:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY

Query:  WKRNCLKYLAEKKKANE
        WKRNC KYLA+KKKA +
Subjt:  WKRNCLKYLAEKKKANE

KAA0026233.1 gag/pol protein [Cucumis melo var. makuwa]3.0e-0450.85Show/hide
Query:  EEDHVRDHRPRSKIVINEISKEATNTSTRVVDQAGPSRGVVDEASTSLQSHLPQEREIP
        EEDH+R+H+PRSKIV+NE+SKE T  STRVV++      VV    +S ++H PQ    P
Subjt:  EEDHVRDHRPRSKIVINEISKEATNTSTRVVDQAGPSRGVVDEASTSLQSHLPQEREIP

KAA0026233.1 gag/pol protein [Cucumis melo var. makuwa]7.6e-2464.96Show/hide
Query:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY
        MNK+ YTLTT LNELQT++SLMK KGQ+GEANVATS R FHRGS+S TKS PS S +K +KKKK  G+  K + A A T K K K A KG  F CN +G+
Subjt:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY

Query:  WKRNCLKYLAEKKKANE
        WKRNC KYLAEKKKA +
Subjt:  WKRNCLKYLAEKKKANE

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]7.6e-2464.96Show/hide
Query:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY
        MNK+ YTLTT LNELQT++SLMK KGQ+GEANVATS R FHRGS+S TKS PS S +K +KKKK  G+  K + A A T K K K A KG  F CN +G+
Subjt:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY

Query:  WKRNCLKYLAEKKKANE
        WKRNC KYLAEKKKA +
Subjt:  WKRNCLKYLAEKKKANE

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-0450.85Show/hide
Query:  EEDHVRDHRPRSKIVINEISKEATNTSTRVVDQAGPSRGVVDEASTSLQSHLPQEREIP
        EEDH+R+H+PRSKIV+NE+SKE T  STRVV++      VV    +S ++H PQ    P
Subjt:  EEDHVRDHRPRSKIVINEISKEATNTSTRVVDQAGPSRGVVDEASTSLQSHLPQEREIP

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]7.6e-2464.96Show/hide
Query:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY
        MNK+ YTLTT LNELQT++SLMK KGQ+GEANVATS R FHRGS+S TKS PS S +K +KKKK  G+  K + A A T K K K A KG  F CN +G+
Subjt:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY

Query:  WKRNCLKYLAEKKKANE
        WKRNC KYLAEKKKA +
Subjt:  WKRNCLKYLAEKKKANE

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-0450.85Show/hide
Query:  EEDHVRDHRPRSKIVINEISKEATNTSTRVVDQAGPSRGVVDEASTSLQSHLPQEREIP
        EEDH+R+H+PRSKIV+NE+SKE T  STRVV++      VV    +S ++H PQ    P
Subjt:  EEDHVRDHRPRSKIVINEISKEATNTSTRVVDQAGPSRGVVDEASTSLQSHLPQEREIP

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein6.5e-0550.85Show/hide
Query:  EEDHVRDHRPRSKIVINEISKEATNTSTRVVDQAGPSRGVVDEASTSLQSHLPQEREIP
        EEDH+R+H+PRSKIV+NE+SKE T  STRVV++      VV    +S ++H PQ    P
Subjt:  EEDHVRDHRPRSKIVINEISKEATNTSTRVVDQAGPSRGVVDEASTSLQSHLPQEREIP

A0A5A7SMH8 Gag/pol protein3.7e-2464.96Show/hide
Query:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY
        MNK+ YTLTT LNELQT++SLMK KGQ+GEANVATS R FHRGS+S TKS PS S +K +KKKK  G+  K + A A T K K K A KG  F CN +G+
Subjt:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY

Query:  WKRNCLKYLAEKKKANE
        WKRNC KYLAEKKKA +
Subjt:  WKRNCLKYLAEKKKANE

A0A5A7SNP8 Gag/pol protein2.8e-2464.1Show/hide
Query:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY
        MNK+ YTLTT LNELQT++SLMK KGQ+GEANVATS R FHRGS+S TKS PS S +K +KKKK  G+  K + A A T K K K A KG  F+CN +G+
Subjt:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY

Query:  WKRNCLKYLAEKKKANE
        WKRNC KYLA+KKKA +
Subjt:  WKRNCLKYLAEKKKANE

A0A5A7SNP8 Gag/pol protein1.4e-0450.85Show/hide
Query:  EEDHVRDHRPRSKIVINEISKEATNTSTRVVDQAGPSRGVVDEASTSLQSHLPQEREIP
        EEDH+R+H+PRSKIV+NE+SKE T  STRVV++      VV    +S ++H PQ    P
Subjt:  EEDHVRDHRPRSKIVINEISKEATNTSTRVVDQAGPSRGVVDEASTSLQSHLPQEREIP

A0A5A7SNP8 Gag/pol protein3.7e-2464.96Show/hide
Query:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY
        MNK+ YTLTT LNELQT++SLMK KGQ+GEANVATS R FHRGS+S TKS PS S +K +KKKK  G+  K + A A T K K K A KG  F CN +G+
Subjt:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY

Query:  WKRNCLKYLAEKKKANE
        WKRNC KYLAEKKKA +
Subjt:  WKRNCLKYLAEKKKANE

A0A5A7V4M1 Gag/pol protein6.5e-0550.85Show/hide
Query:  EEDHVRDHRPRSKIVINEISKEATNTSTRVVDQAGPSRGVVDEASTSLQSHLPQEREIP
        EEDH+R+H+PRSKIV+NE+SKE T  STRVV++      VV    +S ++H PQ    P
Subjt:  EEDHVRDHRPRSKIVINEISKEATNTSTRVVDQAGPSRGVVDEASTSLQSHLPQEREIP

A0A5A7V4M1 Gag/pol protein3.7e-2464.96Show/hide
Query:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY
        MNK+ YTLTT LNELQT++SLMK KGQ+GEANVATS R FHRGS+S TKS PS S +K +KKKK  G+  K + A A T K K K A KG  F CN +G+
Subjt:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY

Query:  WKRNCLKYLAEKKKANE
        WKRNC KYLAEKKKA +
Subjt:  WKRNCLKYLAEKKKANE

A0A5D3CPJ6 Gag/pol protein6.5e-0550.85Show/hide
Query:  EEDHVRDHRPRSKIVINEISKEATNTSTRVVDQAGPSRGVVDEASTSLQSHLPQEREIP
        EEDH+R+H+PRSKIV+NE+SKE T  STRVV++      VV    +S ++H PQ    P
Subjt:  EEDHVRDHRPRSKIVINEISKEATNTSTRVVDQAGPSRGVVDEASTSLQSHLPQEREIP

A0A5D3CPJ6 Gag/pol protein3.7e-2464.96Show/hide
Query:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY
        MNK+ YTLTT LNELQT++SLMK KGQ+GEANVATS R FHRGS+S TKS PS S +K +KKKK  G+  K + A A T K K K A KG  F CN +G+
Subjt:  MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMR-FHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGY

Query:  WKRNCLKYLAEKKKANE
        WKRNC KYLAEKKKA +
Subjt:  WKRNCLKYLAEKKKANE

A0A5D3DS88 Gag/pol protein6.5e-0550.85Show/hide
Query:  EEDHVRDHRPRSKIVINEISKEATNTSTRVVDQAGPSRGVVDEASTSLQSHLPQEREIP
        EEDH+R+H+PRSKIV+NE+SKE T  STRVV++      VV    +S ++H PQ    P
Subjt:  EEDHVRDHRPRSKIVINEISKEATNTSTRVVDQAGPSRGVVDEASTSLQSHLPQEREIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAAACTAGAGTACACTCTTACCACGTTCTTAAACGAGCTGCAAACCTACCAGTCTCTTATGAAAAGTAAGGGACAAGAAGGGGAGGCAAACGTTGCCACC
TCAATGAGGTTCCACCGAGGTTCGTCTTCTAGAACCAAGTCTGCACCCTCTTTCTCTAGAAGTAAGACTTTCAAGAAGAAAAAGGCTGCTGGTAAGAGGTTTAAA
CCTGACTTCGCTGTTGCTGCTACCAAGAAAGACAAGGTCAAGGTTGCAAACAAAGGAAAATTTTTCATCTGCAACGTAGACGGGTATTGGAAGCGCAATTGCCTG
AAATACCTGGCCGAGAAGAAAAAAGCCAACGAAGAAGACCACGTTCGAGATCATAGACCACGAAGTAAGATAGTGATAAACGAGATTTCTAAAGAAGCTACAAAC
ACGTCAACAAGAGTTGTTGATCAAGCTGGTCCTTCAAGAGGAGTTGTTGATGAAGCCAGCACATCACTTCAGTCACATTTACCTCAAGAAAGAGAAATACCCATA
TTTGGTCCGGGTTGCATAGTTGAGGAAGACCACAAACCACAGCTTCTTGCATGTATTATCAATTTACCTAATGGTTCCAGCACCGGCACGGCTCCCTCCGACGAC
GGCGGCGATTTTGTCCACGGTGGTAGCAGCCCAGATCCAGCGAGATCTCACGGTTGTGGCGTTCCCCGGCGGCGGCGCGACCACAAACCAAACGTGAAGCGACTT
CCGACGGCGACTCGGCGTACAGCTCCCTCCGACAACGTCGTCTTCAGATCCGACGACACCCAGCAGGTCGCGCGACTCGTCCTCCGGTGTTTCTGCGTGCGAGGC
CGCGGCGGTCCTCCGCGAACAGCAGGTCCGACGAGAGGTGCACGGGTTCTGCAGCAAACTTCCTCCATCGGCCTTCTTTTCCGACGATACCCAGCAGCGGTGCGT
CTACCTTCTGCGGCGTCCTCCGACGAGGCGTCAGAGCTTCTCCTCCTGCAACGTTGCTGCAGATCAGGCGATTCCACGAGCAGCGGCGCGTTACCTTCGGTGGCT
GCAGCAAACCACGGACTCCGACAACCACCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATAAACTAGAGTACACTCTTACCACGTTCTTAAACGAGCTGCAAACCTACCAGTCTCTTATGAAAAGTAAGGGACAAGAAGGGGAGGCAAACGTTGCCACC
TCAATGAGGTTCCACCGAGGTTCGTCTTCTAGAACCAAGTCTGCACCCTCTTTCTCTAGAAGTAAGACTTTCAAGAAGAAAAAGGCTGCTGGTAAGAGGTTTAAA
CCTGACTTCGCTGTTGCTGCTACCAAGAAAGACAAGGTCAAGGTTGCAAACAAAGGAAAATTTTTCATCTGCAACGTAGACGGGTATTGGAAGCGCAATTGCCTG
AAATACCTGGCCGAGAAGAAAAAAGCCAACGAAGAAGACCACGTTCGAGATCATAGACCACGAAGTAAGATAGTGATAAACGAGATTTCTAAAGAAGCTACAAAC
ACGTCAACAAGAGTTGTTGATCAAGCTGGTCCTTCAAGAGGAGTTGTTGATGAAGCCAGCACATCACTTCAGTCACATTTACCTCAAGAAAGAGAAATACCCATA
TTTGGTCCGGGTTGCATAGTTGAGGAAGACCACAAACCACAGCTTCTTGCATGTATTATCAATTTACCTAATGGTTCCAGCACCGGCACGGCTCCCTCCGACGAC
GGCGGCGATTTTGTCCACGGTGGTAGCAGCCCAGATCCAGCGAGATCTCACGGTTGTGGCGTTCCCCGGCGGCGGCGCGACCACAAACCAAACGTGAAGCGACTT
CCGACGGCGACTCGGCGTACAGCTCCCTCCGACAACGTCGTCTTCAGATCCGACGACACCCAGCAGGTCGCGCGACTCGTCCTCCGGTGTTTCTGCGTGCGAGGC
CGCGGCGGTCCTCCGCGAACAGCAGGTCCGACGAGAGGTGCACGGGTTCTGCAGCAAACTTCCTCCATCGGCCTTCTTTTCCGACGATACCCAGCAGCGGTGCGT
CTACCTTCTGCGGCGTCCTCCGACGAGGCGTCAGAGCTTCTCCTCCTGCAACGTTGCTGCAGATCAGGCGATTCCACGAGCAGCGGCGCGTTACCTTCGGTGGCT
GCAGCAAACCACGGACTCCGACAACCACCGTGA
Protein sequenceShow/hide protein sequence
MNKLEYTLTTFLNELQTYQSLMKSKGQEGEANVATSMRFHRGSSSRTKSAPSFSRSKTFKKKKAAGKRFKPDFAVAATKKDKVKVANKGKFFICNVDGYWKRNCL
KYLAEKKKANEEDHVRDHRPRSKIVINEISKEATNTSTRVVDQAGPSRGVVDEASTSLQSHLPQEREIPIFGPGCIVEEDHKPQLLACIINLPNGSSTGTAPSDD
GGDFVHGGSSPDPARSHGCGVPRRRRDHKPNVKRLPTATRRTAPSDNVVFRSDDTQQVARLVLRCFCVRGRGGPPRTAGPTRGARVLQQTSSIGLLFRRYPAAVR
LPSAASSDEASELLLLQRCCRSGDSTSSGALPSVAAANHGLRQPP