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Moc04g22290 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g22290
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionAP2 domain transcription factor, putative
Genome locationchr4:16162205..16167638
RNA-Seq ExpressionMoc04g22290
SyntenyMoc04g22290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAG7722825.1 unnamed protein product, partial [Allacma fusca]1.2e-0541.84Show/hide
Query:  DLVGRRDLISGRDLVDKRNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRDLVGRIDLVNGKDLVSR---RSGHDLGSSHAL
        DL   RDL S RDL  KR   S  D    RD  S  DL   RDL    DL  T DL  +R+L  +RDL  +  L + +DL SR    S  DL S   L
Subjt:  DLVGRRDLISGRDLVDKRNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRDLVGRIDLVNGKDLVSR---RSGHDLGSSHAL

OWF56778.1 hypothetical protein KP79_PYT25353 [Mizuhopecten yessoensis]6.8e-0636.7Show/hide
Query:  SGVCLGFDSINGPSVGMVTPGRHAGHVVDLVGRRDLISGRDLVDKRNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRDLVGRI
        SG  +G   ++G S  MV  G   G   D+VG  +++   D+V   + V  +D+VG  D V   D+VG  D+V  GD+VG+G++V   ++V   D+VGR+
Subjt:  SGVCLGFDSINGPSVGMVTPGRHAGHVVDLVGRRDLISGRDLVDKRNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRDLVGRI

Query:  DLVNGKDLV
        D+V   D+V
Subjt:  DLVNGKDLV

PQQ68288.1 hypothetical protein B9R14_07200 [Acetivibrio saccincola]1.6e-0739.52Show/hide
Query:  SGVCLGFDSINGPSVGMVTPGR--HAGHVV---DLVGRRDLISGRDLVDKRNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRD
        SGV +G   + G S  +V  G    +G VV   D+VG  D++   D+V   + V   D+VG  D V + D+VG  D+VG GD+VG+GD+VG  ++V   D
Subjt:  SGVCLGFDSINGPSVGMVTPGR--HAGHVV---DLVGRRDLISGRDLVDKRNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRD

Query:  LVGRIDLVNGKDLVSRRSGHDLGS
        +VG  D+V   D+V   SG  +GS
Subjt:  LVGRIDLVNGKDLVSRRSGHDLGS

VWU52582.1 AP2 domain transcription factor, putative, partial [Hepatocystis sp. ex Piliocolobus tephrosceles]8.1e-0743.42Show/hide
Query:  VDLVGRRDLISGRDLVDKRNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRDLVGRIDLV
        VD+VG  D++   D+V   + V  +D+VGG D V  +D+VG  D+VGG D+VG  D+VG  ++V   D+VG +D+V
Subjt:  VDLVGRRDLISGRDLVDKRNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRDLVGRIDLV

WP_079064727.1 lamin tail domain-containing protein [Streptomyces olivochromogenes]2.0e-0543.14Show/hide
Query:  GRH-AGHVVDLVGRRDLISGRDLVDKRNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRDLVGRIDLVNGKDLVSRRSGHDLGS
        GRH  G   D+ GR D+  GRDL  + +     DL G  D     D+ GGRDL G  D+ G  DL GR ++   RDL GR D+  G+DL  R   HDLG 
Subjt:  GRH-AGHVVDLVGRRDLISGRDLVDKRNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRDLVGRIDLVNGKDLVSRRSGHDLGS

Query:  SH
         H
Subjt:  SH

TrEMBL top hitse value%identityAlignment
A0A210R758 Uncharacterized protein3.3e-0636.7Show/hide
Query:  SGVCLGFDSINGPSVGMVTPGRHAGHVVDLVGRRDLISGRDLVDKRNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRDLVGRI
        SG  +G   ++G S  MV  G   G   D+VG  +++   D+V   + V  +D+VG  D V   D+VG  D+V  GD+VG+G++V   ++V   D+VGR+
Subjt:  SGVCLGFDSINGPSVGMVTPGRHAGHVVDLVGRRDLISGRDLVDKRNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRDLVGRI

Query:  DLVNGKDLV
        D+V   D+V
Subjt:  DLVNGKDLV

A0A2S8REV7 Uncharacterized protein7.9e-0839.52Show/hide
Query:  SGVCLGFDSINGPSVGMVTPGR--HAGHVV---DLVGRRDLISGRDLVDKRNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRD
        SGV +G   + G S  +V  G    +G VV   D+VG  D++   D+V   + V   D+VG  D V + D+VG  D+VG GD+VG+GD+VG  ++V   D
Subjt:  SGVCLGFDSINGPSVGMVTPGR--HAGHVV---DLVGRRDLISGRDLVDKRNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRD

Query:  LVGRIDLVNGKDLVSRRSGHDLGS
        +VG  D+V   D+V   SG  +GS
Subjt:  LVGRIDLVNGKDLVSRRSGHDLGS

A0A4Z2F224 Collagen-like protein 11.6e-0547.25Show/hide
Query:  VVDLVGRRDLISGRDLVDKRNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRDLVGRIDLVNGKDLVSRRSGHDL
        +VDLV  RDL+  RDLVD  + V +IDLV   D   I+DL    DL+   DL    DLV   +LVD RDLV  +DLV+  DLV      DL
Subjt:  VVDLVGRRDLISGRDLVDKRNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRDLVGRIDLVNGKDLVSRRSGHDL

A0A653H8X7 AP2 domain transcription factor, putative (Fragment)3.9e-0743.42Show/hide
Query:  VDLVGRRDLISGRDLVDKRNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRDLVGRIDLV
        VD+VG  D++   D+V   + V  +D+VGG D V  +D+VG  D+VGG D+VG  D+VG  ++V   D+VG +D+V
Subjt:  VDLVGRRDLISGRDLVDKRNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRDLVGRIDLV

A0A6S6V6Q0 Uncharacterized protein4.8e-0544.83Show/hide
Query:  DLVGRRDLISGRDLVDK----RNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRDLVGRIDLVNGKDLVSR
        D+V RRD++  RD+VD+    R+ V   D+V  RD V   D+V  RD+V   D+V   D+V RR++VDRRD+V R D+V+ +D+V R
Subjt:  DLVGRRDLISGRDLVDK----RNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRDLVGRIDLVNGKDLVSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACCCCGTTCGACTCTTCCACGTTGAAGTGGATCATCGGGTTGAGAACGTGTGCTCACATTGAGGAGCCCTCCTTCATACGGGAGTTCAAGAACATTAGA
TATGCTTGCCAAGATATAGACCTTGGCCTTGTCATTGGCCTTGATCCATCGGTCATAGACATTGCGCACCACCACAGTGGCGTTAGATCTCAAAGGTCCACTCCA
ATAATTCCCGCCGTAGGGAAGGGAAATATTGGAGCAAAACCTAAGAAACTCTTATCCATTTCTGGAGTTTGCCTTGGTTTTGATTCAATCAATGGACCCTCCGTA
GGGATGGTCACACCAGGACGACACGCAGGACATGTAGTCGATTTGGTTGGCAGAAGAGACCTGATCAGCGGAAGAGACTTGGTCGACAAAAGAAATCATGTCAGC
ATAATAGACCTAGTCGGCGGAAGAGATCATGTTAGCATAATAGACCTGGTCGGCGGAAGAGACTTGGTCGGCGGAGGAGACCTGGTCGGTACAGGAGACTTGGTC
GGTAGAAGAGAACTGGTTGACAGAAGAGACTTGGTCGGCAGAATAGACCTGGTCAATGGAAAAGATCTAGTTAGTAGAAGATCGGGTCATGACCTTGGATCTAGT
CATGCCTTGGACTTGGTCATGCCTTGGATCTGGTCATGCCTTGGACGTCATCATGCCTTAGCACTAGTCATGACTTGTCGGTGGAAGAGCACTAGTCATGCCTTG
TCGGTGGAAGAGCACTGGTCATGCCTTGGACCTGATCATACCCTAGAGTCTGGTCATGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGACCCCGTTCGACTCTTCCACGTTGAAGTGGATCATCGGGTTGAGAACGTGTGCTCACATTGAGGAGCCCTCCTTCATACGGGAGTTCAAGAACATTAGA
TATGCTTGCCAAGATATAGACCTTGGCCTTGTCATTGGCCTTGATCCATCGGTCATAGACATTGCGCACCACCACAGTGGCGTTAGATCTCAAAGGTCCACTCCA
ATAATTCCCGCCGTAGGGAAGGGAAATATTGGAGCAAAACCTAAGAAACTCTTATCCATTTCTGGAGTTTGCCTTGGTTTTGATTCAATCAATGGACCCTCCGTA
GGGATGGTCACACCAGGACGACACGCAGGACATGTAGTCGATTTGGTTGGCAGAAGAGACCTGATCAGCGGAAGAGACTTGGTCGACAAAAGAAATCATGTCAGC
ATAATAGACCTAGTCGGCGGAAGAGATCATGTTAGCATAATAGACCTGGTCGGCGGAAGAGACTTGGTCGGCGGAGGAGACCTGGTCGGTACAGGAGACTTGGTC
GGTAGAAGAGAACTGGTTGACAGAAGAGACTTGGTCGGCAGAATAGACCTGGTCAATGGAAAAGATCTAGTTAGTAGAAGATCGGGTCATGACCTTGGATCTAGT
CATGCCTTGGACTTGGTCATGCCTTGGATCTGGTCATGCCTTGGACGTCATCATGCCTTAGCACTAGTCATGACTTGTCGGTGGAAGAGCACTAGTCATGCCTTG
TCGGTGGAAGAGCACTGGTCATGCCTTGGACCTGATCATACCCTAGAGTCTGGTCATGACTAG
Protein sequenceShow/hide protein sequence
MTTPFDSSTLKWIIGLRTCAHIEEPSFIREFKNIRYACQDIDLGLVIGLDPSVIDIAHHHSGVRSQRSTPIIPAVGKGNIGAKPKKLLSISGVCLGFDSINGPSV
GMVTPGRHAGHVVDLVGRRDLISGRDLVDKRNHVSIIDLVGGRDHVSIIDLVGGRDLVGGGDLVGTGDLVGRRELVDRRDLVGRIDLVNGKDLVSRRSGHDLGSS
HALDLVMPWIWSCLGRHHALALVMTCRWKSTSHALSVEEHWSCLGPDHTLESGHD