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Moc04g22340 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g22340
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr4:16209072..16210567
RNA-Seq ExpressionMoc04g22340
SyntenyMoc04g22340
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-1666.2Show/hide
Query:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
        TRGG F+DP++N+VFVSTNATFLEEDHIR+H PRSK+V+NE+S+E T  STRVV++ S  TRVV   S++R
Subjt:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-1666.2Show/hide
Query:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
        TRGG F+DP++N+VFVSTNATFLEEDHIR+H PRSK+V+NE+S+E T  STRVV++ S  TRVV   S++R
Subjt:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
KAA0061339.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-1666.2Show/hide
Query:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
        TRGG F+DP++N+VFVSTNATFLEEDHIR+H PRSK+V+NE+S+E T  STRVV++ S  TRVV   S++R
Subjt:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
TYJ97618.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-1666.2Show/hide
Query:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
        TRGG F+DP++N+VFVSTNATFLEEDHIR+H PRSK+V+NE+S+E T  STRVV++ S  TRVV   S++R
Subjt:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-1666.2Show/hide
Query:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
        TRGG F+DP++N+VFVSTNATFLEEDHIR+H PRSK+V+NE+S+E T  STRVV++ S  TRVV   S++R
Subjt:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein1.3e-1666.2Show/hide
Query:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
        TRGG F+DP++N+VFVSTNATFLEEDHIR+H PRSK+V+NE+S+E T  STRVV++ S  TRVV   S++R
Subjt:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
A0A5A7TWB9 Gag/pol protein1.3e-1666.2Show/hide
Query:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
        TRGG F+DP++N+VFVSTNATFLEEDHIR+H PRSK+V+NE+S+E T  STRVV++ S  TRVV   S++R
Subjt:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
A0A5A7V4M1 Gag/pol protein1.3e-1666.2Show/hide
Query:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
        TRGG F+DP++N+VFVSTNATFLEEDHIR+H PRSK+V+NE+S+E T  STRVV++ S  TRVV   S++R
Subjt:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
A0A5D3CPJ6 Gag/pol protein1.3e-1666.2Show/hide
Query:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
        TRGG F+DP++N+VFVSTNATFLEEDHIR+H PRSK+V+NE+S+E T  STRVV++ S  TRVV   S++R
Subjt:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
A0A5D3DS88 Gag/pol protein1.3e-1666.2Show/hide
Query:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
        TRGG F+DP++N+VFVSTNATFLEEDHIR+H PRSK+V+NE+S+E T  STRVV++ S  TRVV   S++R
Subjt:  TRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTRVVDEVSTSR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAGGTCGATGCACAATTCAAGGCTTTGGGGATAAATGGCAAGGCCGGACACCAAGCTTCTGTAGATGAGTGTCGGGCCTTGGGGATAAATGGCAAGGTC
CAATGCCAAGCTTCTGTAGATGAGTGTCGGACCTTAGGGATAAATGGCAAGGGCCGATACGATTCGAGGAGTCCAACGCTGAGCACCGTAGAGAAGTGTCGATGC
TTTAGCTATGCGAGGTCAGAGGTTGGTACCACTCGAAGGAATAAGGGCTGCTTACTGAGTAACGTGGTTGTACTCATCCCTCTTTCTTTCCCCTCCAGTTTCGTA
GACGCGTGTAGTGGATGGTTTACGATTAGTGAAGATTTCATTGAGAAGTTTTATAAGAGTAGCGTAGCGGAAGCATGGTGGCTTTTAGTAATGGTCCCCGTTGGG
ATGTTGAAAATCCTGGGGCGTTACACAAGAGGTGGTCTTTTCTTCGATCCACGAGAAAACAGAGTGTTTGTATCGACAAATGCCACCTTCTTGGAAGAAGACCAC
ATTCGAGATCATATACCACGAAGTAAGGTAGTGATAAACGAGATTTCCGAAGAGGCTACAAATACGTCAACAAGAGTTGTTGATCAAGATAGCACTTCAACAAGA
GTTGTTGATGAAGTCAGCACATCACGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAGGTCGATGCACAATTCAAGGCTTTGGGGATAAATGGCAAGGCCGGACACCAAGCTTCTGTAGATGAGTGTCGGGCCTTGGGGATAAATGGCAAGGTC
CAATGCCAAGCTTCTGTAGATGAGTGTCGGACCTTAGGGATAAATGGCAAGGGCCGATACGATTCGAGGAGTCCAACGCTGAGCACCGTAGAGAAGTGTCGATGC
TTTAGCTATGCGAGGTCAGAGGTTGGTACCACTCGAAGGAATAAGGGCTGCTTACTGAGTAACGTGGTTGTACTCATCCCTCTTTCTTTCCCCTCCAGTTTCGTA
GACGCGTGTAGTGGATGGTTTACGATTAGTGAAGATTTCATTGAGAAGTTTTATAAGAGTAGCGTAGCGGAAGCATGGTGGCTTTTAGTAATGGTCCCCGTTGGG
ATGTTGAAAATCCTGGGGCGTTACACAAGAGGTGGTCTTTTCTTCGATCCACGAGAAAACAGAGTGTTTGTATCGACAAATGCCACCTTCTTGGAAGAAGACCAC
ATTCGAGATCATATACCACGAAGTAAGGTAGTGATAAACGAGATTTCCGAAGAGGCTACAAATACGTCAACAAGAGTTGTTGATCAAGATAGCACTTCAACAAGA
GTTGTTGATGAAGTCAGCACATCACGTTAG
Protein sequenceShow/hide protein sequence
MSKVDAQFKALGINGKAGHQASVDECRALGINGKVQCQASVDECRTLGINGKGRYDSRSPTLSTVEKCRCFSYARSEVGTTRRNKGCLLSNVVVLIPLSFPSSFV
DACSGWFTISEDFIEKFYKSSVAEAWWLLVMVPVGMLKILGRYTRGGLFFDPRENRVFVSTNATFLEEDHIRDHIPRSKVVINEISEEATNTSTRVVDQDSTSTR
VVDEVSTSR