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Moc04g22360 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g22360
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111020110
Genome locationchr4:16219147..16219884
RNA-Seq ExpressionMoc04g22360
SyntenyMoc04g22360
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152366.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111020110 [Momordica charantia]8.5e-12893.72Show/hide
Query:  HTSLPTSFTQAPNATSIPFPPLENFQHHMVSDSRLATVRGGNPLQTFECPPSRAPTQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPMINPGMY
        HTSLPTS TQAPNATSIPFPPLENFQHHMVSDSRLA VRGGNPLQTFECPPS+APTQHPIMSPHGYVNFQQLPT NIPQ+SEFRAENPQQLPPMINPGMY
Subjt:  HTSLPTSFTQAPNATSIPFPPLENFQHHMVSDSRLATVRGGNPLQTFECPPSRAPTQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPMINPGMY

Query:  QPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPYCGMGHWVPPTNYGMISPRVPPPAQLPFLERGPQAPQLNPNILSTFNIGQLKPLEPPRM
        QPFMFN VPSYHFPLSQMQIPASVHPYGMPNPSTLFPSL PY GMGHWVPPTNYGMISPRVPPP QL FLERGPQAPQLNPNILSTFN+GQLKPLEPPRM
Subjt:  QPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPYCGMGHWVPPTNYGMISPRVPPPAQLPFLERGPQAPQLNPNILSTFNIGQLKPLEPPRM

Query:  PTPTNMPMDAGDEYGGEQEKSHSHRLEPRVSIGQKRKGK
        PTPTNMPMD GDE+GGEQEKSHSHRLEP V IGQKRKGK
Subjt:  PTPTNMPMDAGDEYGGEQEKSHSHRLEPRVSIGQKRKGK

XP_022157800.1 protein PAF1 homolog [Momordica charantia]1.9e-10387.2Show/hide
Query:  MVSDSRLATVRGGNPLQTFECPPSRAPTQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPMINPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYG
        MV D RLA VRGGNPLQTFE PPS+APTQHP+MSPHGYVNFQQLP LNIPQNSEFRAE+PQQ PPMINPGMYQPF+FNPVP YHFPLSQMQIPASVHPYG
Subjt:  MVSDSRLATVRGGNPLQTFECPPSRAPTQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPMINPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYG

Query:  MPNPSTLFPSLPPYCGMGHWVPPTNYGMISPRVPPPAQLPFLERGPQAPQLNPNILSTFNIGQLKPLEPPRMPTPTNMPMDAGDEYGGEQEKSHSHRLEP
        MPNPSTLFPSLPPY  MG+WVPP NYGMISPRVPPP QLPFLERGPQAPQLNPNILSTFN+GQLKPLEPP MP P N+PMD G E+GGEQEKSH+ RLEP
Subjt:  MPNPSTLFPSLPPYCGMGHWVPPTNYGMISPRVPPPAQLPFLERGPQAPQLNPNILSTFNIGQLKPLEPPRMPTPTNMPMDAGDEYGGEQEKSHSHRLEP

Query:  RVSIGQKRKGK
         VSIGQKRKGK
Subjt:  RVSIGQKRKGK

XP_022158357.1 uncharacterized protein LOC111024860 [Momordica charantia]5.7e-13293.47Show/hide
Query:  MASSSQHTSLPTSFTQAPNATSIPFPPLENFQHHMVSDSRLATVRGGNPLQTFECPPSRAPTQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPM
        MASSSQHTSLPTS T APNATSIPFPPLENFQHHM SDSRLA VRGGNPLQTFECPPS+APTQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPM
Subjt:  MASSSQHTSLPTSFTQAPNATSIPFPPLENFQHHMVSDSRLATVRGGNPLQTFECPPSRAPTQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPM

Query:  INPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPYCGMGHWVPPTNYGMISPRVPPPAQLPFLERGPQAPQLNPNILSTFNIGQLKP
        INPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPY GMGHW+PP NYGMISP+VPPP QLPFLERGPQAPQL+PNILST+N+GQLKP
Subjt:  INPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPYCGMGHWVPPTNYGMISPRVPPPAQLPFLERGPQAPQLNPNILSTFNIGQLKP

Query:  LEPPRMPTPTNMPMDAGDEYGGEQEKSHSHRLEPRVSIGQKRKGK
        LEPPRMPTPTNMPMDAGDE+GGEQEK HSHRLEP VSIGQKRKGK
Subjt:  LEPPRMPTPTNMPMDAGDEYGGEQEKSHSHRLEPRVSIGQKRKGK

XP_022158852.1 uncharacterized protein LOC111025316 [Momordica charantia]1.9e-9091.62Show/hide
Query:  MSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPMINPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPYCGMGHWVPPTNYGMISPR
        M+PHGYVNFQ LPTLNIPQNSEFRAE+PQQLPPMINPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPY GMGHWVPP NYGMISPR
Subjt:  MSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPMINPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPYCGMGHWVPPTNYGMISPR

Query:  VPPPAQLPFLERGPQAPQLNPNILSTFNIGQLKPLEPPRMPTPTNMPMDAGDEYGGEQEKSHSHRLEPRVSIGQKRKGK
        VPPP QLPFLERGPQAPQLNPNILSTFN+G LKPLEP RM  PTNMPMD GDE+GGEQEKSHS RLEP VSIGQKRKGK
Subjt:  VPPPAQLPFLERGPQAPQLNPNILSTFNIGQLKPLEPPRMPTPTNMPMDAGDEYGGEQEKSHSHRLEPRVSIGQKRKGK

XP_022158979.1 uncharacterized protein LOC111025424 [Momordica charantia]3.3e-9594.54Show/hide
Query:  MASSSQHTSLPTSFTQAPNATSIPFPPLENFQHHMVSDSRLATVRGGNPLQTFECPPSRAPTQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPM
        MASSSQHTSLPTS TQAPNATSIPFPPLENFQHHMVSDSRLA VRGGNPLQTFECPP +A TQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQL PM
Subjt:  MASSSQHTSLPTSFTQAPNATSIPFPPLENFQHHMVSDSRLATVRGGNPLQTFECPPSRAPTQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPM

Query:  INPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPYCGMGHWVPPTNYGMISPRVPPPAQLPFLERGPQAP
        INPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPY GMGHWV PTNYGMISPRVPPP QL FLERGPQAP
Subjt:  INPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPYCGMGHWVPPTNYGMISPRVPPPAQLPFLERGPQAP

TrEMBL top hitse value%identityAlignment
A0A6J1DHH9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110201104.1e-12893.72Show/hide
Query:  HTSLPTSFTQAPNATSIPFPPLENFQHHMVSDSRLATVRGGNPLQTFECPPSRAPTQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPMINPGMY
        HTSLPTS TQAPNATSIPFPPLENFQHHMVSDSRLA VRGGNPLQTFECPPS+APTQHPIMSPHGYVNFQQLPT NIPQ+SEFRAENPQQLPPMINPGMY
Subjt:  HTSLPTSFTQAPNATSIPFPPLENFQHHMVSDSRLATVRGGNPLQTFECPPSRAPTQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPMINPGMY

Query:  QPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPYCGMGHWVPPTNYGMISPRVPPPAQLPFLERGPQAPQLNPNILSTFNIGQLKPLEPPRM
        QPFMFN VPSYHFPLSQMQIPASVHPYGMPNPSTLFPSL PY GMGHWVPPTNYGMISPRVPPP QL FLERGPQAPQLNPNILSTFN+GQLKPLEPPRM
Subjt:  QPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPYCGMGHWVPPTNYGMISPRVPPPAQLPFLERGPQAPQLNPNILSTFNIGQLKPLEPPRM

Query:  PTPTNMPMDAGDEYGGEQEKSHSHRLEPRVSIGQKRKGK
        PTPTNMPMD GDE+GGEQEKSHSHRLEP V IGQKRKGK
Subjt:  PTPTNMPMDAGDEYGGEQEKSHSHRLEPRVSIGQKRKGK

A0A6J1DU32 protein PAF1 homolog9.2e-10487.2Show/hide
Query:  MVSDSRLATVRGGNPLQTFECPPSRAPTQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPMINPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYG
        MV D RLA VRGGNPLQTFE PPS+APTQHP+MSPHGYVNFQQLP LNIPQNSEFRAE+PQQ PPMINPGMYQPF+FNPVP YHFPLSQMQIPASVHPYG
Subjt:  MVSDSRLATVRGGNPLQTFECPPSRAPTQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPMINPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYG

Query:  MPNPSTLFPSLPPYCGMGHWVPPTNYGMISPRVPPPAQLPFLERGPQAPQLNPNILSTFNIGQLKPLEPPRMPTPTNMPMDAGDEYGGEQEKSHSHRLEP
        MPNPSTLFPSLPPY  MG+WVPP NYGMISPRVPPP QLPFLERGPQAPQLNPNILSTFN+GQLKPLEPP MP P N+PMD G E+GGEQEKSH+ RLEP
Subjt:  MPNPSTLFPSLPPYCGMGHWVPPTNYGMISPRVPPPAQLPFLERGPQAPQLNPNILSTFNIGQLKPLEPPRMPTPTNMPMDAGDEYGGEQEKSHSHRLEP

Query:  RVSIGQKRKGK
         VSIGQKRKGK
Subjt:  RVSIGQKRKGK

A0A6J1DX11 uncharacterized protein LOC1110248602.8e-13293.47Show/hide
Query:  MASSSQHTSLPTSFTQAPNATSIPFPPLENFQHHMVSDSRLATVRGGNPLQTFECPPSRAPTQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPM
        MASSSQHTSLPTS T APNATSIPFPPLENFQHHM SDSRLA VRGGNPLQTFECPPS+APTQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPM
Subjt:  MASSSQHTSLPTSFTQAPNATSIPFPPLENFQHHMVSDSRLATVRGGNPLQTFECPPSRAPTQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPM

Query:  INPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPYCGMGHWVPPTNYGMISPRVPPPAQLPFLERGPQAPQLNPNILSTFNIGQLKP
        INPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPY GMGHW+PP NYGMISP+VPPP QLPFLERGPQAPQL+PNILST+N+GQLKP
Subjt:  INPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPYCGMGHWVPPTNYGMISPRVPPPAQLPFLERGPQAPQLNPNILSTFNIGQLKP

Query:  LEPPRMPTPTNMPMDAGDEYGGEQEKSHSHRLEPRVSIGQKRKGK
        LEPPRMPTPTNMPMDAGDE+GGEQEK HSHRLEP VSIGQKRKGK
Subjt:  LEPPRMPTPTNMPMDAGDEYGGEQEKSHSHRLEPRVSIGQKRKGK

A0A6J1DY94 uncharacterized protein LOC1110253169.0e-9191.62Show/hide
Query:  MSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPMINPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPYCGMGHWVPPTNYGMISPR
        M+PHGYVNFQ LPTLNIPQNSEFRAE+PQQLPPMINPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPY GMGHWVPP NYGMISPR
Subjt:  MSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPMINPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPYCGMGHWVPPTNYGMISPR

Query:  VPPPAQLPFLERGPQAPQLNPNILSTFNIGQLKPLEPPRMPTPTNMPMDAGDEYGGEQEKSHSHRLEPRVSIGQKRKGK
        VPPP QLPFLERGPQAPQLNPNILSTFN+G LKPLEP RM  PTNMPMD GDE+GGEQEKSHS RLEP VSIGQKRKGK
Subjt:  VPPPAQLPFLERGPQAPQLNPNILSTFNIGQLKPLEPPRMPTPTNMPMDAGDEYGGEQEKSHSHRLEPRVSIGQKRKGK

A0A6J1E110 uncharacterized protein LOC1110254241.6e-9594.54Show/hide
Query:  MASSSQHTSLPTSFTQAPNATSIPFPPLENFQHHMVSDSRLATVRGGNPLQTFECPPSRAPTQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPM
        MASSSQHTSLPTS TQAPNATSIPFPPLENFQHHMVSDSRLA VRGGNPLQTFECPP +A TQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQL PM
Subjt:  MASSSQHTSLPTSFTQAPNATSIPFPPLENFQHHMVSDSRLATVRGGNPLQTFECPPSRAPTQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPM

Query:  INPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPYCGMGHWVPPTNYGMISPRVPPPAQLPFLERGPQAP
        INPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPY GMGHWV PTNYGMISPRVPPP QL FLERGPQAP
Subjt:  INPGMYQPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPYCGMGHWVPPTNYGMISPRVPPPAQLPFLERGPQAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCTTCTCAACATACTTCACTTCCTACCTCTTTTACTCAAGCTCCAAATGCCACAAGCATTCCCTTTCCACCATTGGAGAACTTCCAACACCACATG
GTTTCAGATTCTAGGCTAGCTACTGTTAGGGGAGGAAACCCGCTTCAAACATTTGAATGTCCTCCATCCCGAGCTCCTACACAACATCCTATAATGAGCCCACAT
GGTTATGTTAATTTTCAGCAACTACCCACCCTTAATATACCTCAAAACAGTGAGTTTAGGGCTGAAAATCCTCAACAACTTCCTCCAATGATCAATCCGGGTATG
TACCAACCGTTTATGTTTAACCCGGTTCCATCCTATCATTTTCCCTTGTCCCAAATGCAAATTCCAGCTAGTGTTCATCCTTATGGAATGCCAAACCCATCTACT
CTATTTCCTAGCCTTCCACCTTATTGTGGAATGGGTCATTGGGTACCTCCAACCAATTATGGGATGATTTCACCTAGGGTTCCCCCACCAGCTCAACTTCCATTC
CTAGAAAGAGGACCTCAAGCACCACAATTGAACCCTAACATATTGAGTACCTTCAACATAGGACAACTAAAACCCTTAGAGCCTCCTAGGATGCCAACCCCAACC
AATATGCCAATGGATGCAGGAGATGAGTATGGAGGAGAGCAAGAGAAGAGCCATAGCCATAGGCTAGAGCCCAGGGTTTCGATAGGGCAAAAGAGGAAGGGCAAG
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTCTTCTCAACATACTTCACTTCCTACCTCTTTTACTCAAGCTCCAAATGCCACAAGCATTCCCTTTCCACCATTGGAGAACTTCCAACACCACATG
GTTTCAGATTCTAGGCTAGCTACTGTTAGGGGAGGAAACCCGCTTCAAACATTTGAATGTCCTCCATCCCGAGCTCCTACACAACATCCTATAATGAGCCCACAT
GGTTATGTTAATTTTCAGCAACTACCCACCCTTAATATACCTCAAAACAGTGAGTTTAGGGCTGAAAATCCTCAACAACTTCCTCCAATGATCAATCCGGGTATG
TACCAACCGTTTATGTTTAACCCGGTTCCATCCTATCATTTTCCCTTGTCCCAAATGCAAATTCCAGCTAGTGTTCATCCTTATGGAATGCCAAACCCATCTACT
CTATTTCCTAGCCTTCCACCTTATTGTGGAATGGGTCATTGGGTACCTCCAACCAATTATGGGATGATTTCACCTAGGGTTCCCCCACCAGCTCAACTTCCATTC
CTAGAAAGAGGACCTCAAGCACCACAATTGAACCCTAACATATTGAGTACCTTCAACATAGGACAACTAAAACCCTTAGAGCCTCCTAGGATGCCAACCCCAACC
AATATGCCAATGGATGCAGGAGATGAGTATGGAGGAGAGCAAGAGAAGAGCCATAGCCATAGGCTAGAGCCCAGGGTTTCGATAGGGCAAAAGAGGAAGGGCAAG
TAG
Protein sequenceShow/hide protein sequence
MASSSQHTSLPTSFTQAPNATSIPFPPLENFQHHMVSDSRLATVRGGNPLQTFECPPSRAPTQHPIMSPHGYVNFQQLPTLNIPQNSEFRAENPQQLPPMINPGM
YQPFMFNPVPSYHFPLSQMQIPASVHPYGMPNPSTLFPSLPPYCGMGHWVPPTNYGMISPRVPPPAQLPFLERGPQAPQLNPNILSTFNIGQLKPLEPPRMPTPT
NMPMDAGDEYGGEQEKSHSHRLEPRVSIGQKRKGK